BLASTX nr result

ID: Salvia21_contig00039200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00039200
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   157   9e-37
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   155   2e-36
ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar...   142   2e-32
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                 142   2e-32
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t...   139   3e-31

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  157 bits (397), Expect = 9e-37
 Identities = 76/147 (51%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
 Frame = +1

Query: 67  SLPLPPSNSIQTQNSPVVTTLTRSNHSWVESLRSHARSNSFQQAITTFVQMQAVGILPDN 246
           S+  P ++ + ++  P  T+ +RS  SWV++LRS  RSN F++AI+T+++M   G  PDN
Sbjct: 33  SIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDN 92

Query: 247 YAFPAVLKAATALQDLRLGKQIHGSLVKLGY-DSHATVSNTVLHMYAKCGSDVDQVFKVF 423
           +AFPAVLKA + LQDL+ G+QIH + VK GY  S  TV+NT+++MY KCG  +  V KVF
Sbjct: 93  FAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGG-IGDVCKVF 151

Query: 424 DRIPQRDQVSWNSLINALCKYQEWELA 504
           DRI  RDQVSWNS I ALC++++WE A
Sbjct: 152 DRITDRDQVSWNSFIAALCRFEKWEQA 178



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = +1

Query: 127 LTRSNHSWVESLRSHARSNSFQQAITTFVQM-QAVGILPDNYAFPAVLKAATALQDLRLG 303
           L R    W   +  +AR+   ++A+  F++M +  G+LP+     +V+ A    +     
Sbjct: 360 LGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNK 419

Query: 304 KQIHGSLVKLGYDSHATVSNTVLHMYAKCGSDVDQVFKVFDRIPQRDQVSWNSLI 468
           + IHG  VKLG+     V N ++ MY++ G  +D    +FD +  RD+VSWN++I
Sbjct: 420 ESIHGYAVKLGFKEDRYVQNALMDMYSRMGK-MDISETIFDSMEVRDRVSWNTMI 473



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
 Frame = +1

Query: 133 RSNHSWVESLRSHARSNSFQQAITTFVQMQAVGILPDNYAFPAVLKAATAL---QDLRLG 303
           R   SW   + +  R   ++QA+  F  MQ   +   ++   +V  A + L     LRLG
Sbjct: 157 RDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLG 216

Query: 304 KQIHGSLVKLGYDSHATVSNTVLHMYAKCGSDVDQVFKVFDRIPQRDQVSWNSLINA 474
           KQ+HG  +++G D     +N ++ MYAK G  VD    +F+    RD VSWN++I++
Sbjct: 217 KQLHGYSLRVG-DQKTFTNNALMAMYAKLGR-VDDSKALFESFVDRDMVSWNTMISS 271


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/142 (53%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
 Frame = +1

Query: 82  PSNSIQTQNSPVVTTLTRSNHSWVESLRSHARSNSFQQAITTFVQMQAVGILPDNYAFPA 261
           P+    + + P   + +RS  SW+ESLR + RSN F++AI+T+V M   G+ PD+YAFP 
Sbjct: 23  PTKKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPV 82

Query: 262 VLKAATALQDLRLGKQIHGSLVKLGYDSHA-TVSNTVLHMYAKCGSDVDQVFKVFDRIPQ 438
           VLKA T LQDL LGKQIH  +VK GY+S +  ++N++++ Y KC S++D V+KVFDRI +
Sbjct: 83  VLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKC-SELDDVYKVFDRINE 141

Query: 439 RDQVSWNSLINALCKYQEWELA 504
           RD VSWNSLI+A C+ QEWELA
Sbjct: 142 RDLVSWNSLISAFCRAQEWELA 163



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +1

Query: 145 SWVESLRSHARSNSFQQAITTFVQMQAVGILPDNYAFPAVLKAATALQDLRLGKQIHGSL 324
           SW   + S +++  F +A+ +   M   G+ PD     +VL A + L+ L  GK+IH   
Sbjct: 249 SWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYA 308

Query: 325 VKLG-YDSHATVSNTVLHMYAKCGSDVDQVFKVFDRIPQRDQVSWNSLINALCKYQEWEL 501
           ++ G    ++ V + ++ MY  CG  V    +VFD I +R    WN++I    + +  E 
Sbjct: 309 LRSGDLIENSFVGSALVDMYCNCG-QVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEK 367

Query: 502 A 504
           A
Sbjct: 368 A 368


>ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/126 (53%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
 Frame = +1

Query: 130 TRSNHSWVESLRSHARSNSFQQAITTFVQMQAVGILPDNYAFPAVLKAATALQDLRLGKQ 309
           +RS   W++ LRS  RSN  ++A+ T+V M  +GI PDNYAFPA+LKA   LQD+ LGKQ
Sbjct: 59  SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118

Query: 310 IHGSLVKLGYD-SHATVSNTVLHMYAKCGSDVDQVFKVFDRIPQRDQVSWNSLINALCKY 486
           IH  + K GY     TV+NT++++Y KCG D   V+KVFDRI +R+QVSWNSLI++LC +
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 487 QEWELA 504
           ++WE+A
Sbjct: 178 EKWEMA 183



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/83 (34%), Positives = 47/83 (56%)
 Frame = +1

Query: 226 VGILPDNYAFPAVLKAATALQDLRLGKQIHGSLVKLGYDSHATVSNTVLHMYAKCGSDVD 405
           V + P++     +L +  AL  L  GK+IH   +K    +   V + ++ MYAKCG  + 
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC-LQ 569

Query: 406 QVFKVFDRIPQRDQVSWNSLINA 474
              KVFD+IPQ++ ++WN +I A
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMA 592



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
 Frame = +1

Query: 148 WVESLRSHARSNSFQQAITTFVQMQ-AVGILPDNYAFPAVLKAATALQDLRLGKQIHGSL 324
           W   +  ++++   ++A+  F+ M+ + G+L ++     V+ A          + IHG +
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 325 VKLGYDSHATVSNTVLHMYAKCGSDVDQVFKVFDRIPQRDQVSWNSLI 468
           VK G D    V NT++ MY++ G  +D   ++F ++  RD V+WN++I
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGK-IDIAMRIFGKMEDRDLVTWNTMI 478


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/126 (53%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
 Frame = +1

Query: 130 TRSNHSWVESLRSHARSNSFQQAITTFVQMQAVGILPDNYAFPAVLKAATALQDLRLGKQ 309
           +RS   W++ LRS  RSN  ++A+ T+V M  +GI PDNYAFPA+LKA   LQD+ LGKQ
Sbjct: 59  SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118

Query: 310 IHGSLVKLGYD-SHATVSNTVLHMYAKCGSDVDQVFKVFDRIPQRDQVSWNSLINALCKY 486
           IH  + K GY     TV+NT++++Y KCG D   V+KVFDRI +R+QVSWNSLI++LC +
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 487 QEWELA 504
           ++WE+A
Sbjct: 178 EKWEMA 183



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/83 (34%), Positives = 47/83 (56%)
 Frame = +1

Query: 226 VGILPDNYAFPAVLKAATALQDLRLGKQIHGSLVKLGYDSHATVSNTVLHMYAKCGSDVD 405
           V + P++     +L +  AL  L  GK+IH   +K    +   V + ++ MYAKCG  + 
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC-LQ 569

Query: 406 QVFKVFDRIPQRDQVSWNSLINA 474
              KVFD+IPQ++ ++WN +I A
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMA 592



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
 Frame = +1

Query: 148 WVESLRSHARSNSFQQAITTFVQMQ-AVGILPDNYAFPAVLKAATALQDLRLGKQIHGSL 324
           W   +  ++++   ++A+  F+ M+ + G+L ++     V+ A          + IHG +
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 325 VKLGYDSHATVSNTVLHMYAKCGSDVDQVFKVFDRIPQRDQVSWNSLI 468
           VK G D    V NT++ MY++ G  +D   ++F ++  RD V+WN++I
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGK-IDIAMRIFGKMEDRDLVTWNTMI 478


>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 874

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/146 (48%), Positives = 93/146 (63%), Gaps = 4/146 (2%)
 Frame = +1

Query: 79  PPSNSIQTQNSPVVTTLT---RSNHSWVESLRSHARSNS-FQQAITTFVQMQAVGILPDN 246
           P S+S  T  +   TT+    R    WV  LRS  +S+S F QAI+T+  M   G+ PDN
Sbjct: 26  PTSSSAITTTTTTTTTVAAEPRLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDN 85

Query: 247 YAFPAVLKAATALQDLRLGKQIHGSLVKLGYDSHATVSNTVLHMYAKCGSDVDQVFKVFD 426
           +AFPAVLKA   +QDL LGKQ+H  + K G      V N++++MY KCG D+D   +VFD
Sbjct: 86  FAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCG-DIDAARRVFD 144

Query: 427 RIPQRDQVSWNSLINALCKYQEWELA 504
            I  RD VSWNS+INA C+++EWELA
Sbjct: 145 EITNRDDVSWNSMINAACRFEEWELA 170



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
 Frame = +1

Query: 133 RSNHSWVESLRSHARSNSFQQAITTFVQMQAVGILPDNYAFPAVLKAATAL-QDLRLGKQ 309
           R + SW   + +  R   ++ A+  F  M    + P ++   +V  A + L   L LGKQ
Sbjct: 149 RDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQ 208

Query: 310 IHGSLVKLGYDSHATVSNTVLHMYAKCGSDVDQVFKVFDRIPQRDQVSWNSLINALCKYQ 489
           +H  +++ G D     +N ++ MYAK G  V +   +FD    +D VSWN++I++L +  
Sbjct: 209 VHAFVLRNG-DWRTFTNNALVTMYAKLGR-VYEAKTLFDVFDDKDLVSWNTIISSLSQND 266

Query: 490 EWELA 504
            +E A
Sbjct: 267 RFEEA 271