BLASTX nr result

ID: Salvia21_contig00036706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00036706
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320386.1| methyl binding domain protein [Populus trich...   184   1e-44
ref|XP_002524794.1| DNA binding protein, putative [Ricinus commu...   181   1e-43
ref|XP_002331766.1| methyl binding domain protein [Populus trich...   180   3e-43
ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycin...   169   3e-40
ref|NP_191862.1| methyl-CPG-binding domain 4 protein [Arabidopsi...   168   1e-39

>ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
           gi|118485542|gb|ABK94623.1| unknown [Populus
           trichocarpa] gi|222861159|gb|EEE98701.1| methyl binding
           domain protein [Populus trichocarpa]
          Length = 182

 Score =  184 bits (468), Expect = 1e-44
 Identities = 86/158 (54%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
 Frame = +3

Query: 24  EKKSQQSKRQSTN---GITLVDIWSVQCGECFKWRLIPTEEEFEEIRSKFTKDPFVCSKK 194
           E+  +  K  S N    +  +D ++ QC +C KWR+I TEEE+EEIRSK  + PFVC++K
Sbjct: 5   ERSPETPKTSSKNPRVAVRSIDTYAAQCDKCLKWRVIATEEEYEEIRSKMEESPFVCNRK 64

Query: 195 PGVSCNDPADIERDDTRTWVIHKPGIPKTPSGFKRRLVMRKDFSKMDCYYDAANGKRLRA 374
           PGVSC+DPADIE + TRTWVI +PGIPKTP GFKR LV+R+DFSKMD YY    GK+LR 
Sbjct: 65  PGVSCDDPADIEYNATRTWVIDRPGIPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRT 124

Query: 375 STDVLKFLDKFPKFKNDVSLADFSFTGPKIM*EYVLAD 488
             ++  F+D  PK+K DV+L+DF+FT PK+M + +  D
Sbjct: 125 RNEIAAFIDANPKYK-DVNLSDFNFTSPKVMEDTIPED 161


>ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
           gi|223535978|gb|EEF37637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 160

 Score =  181 bits (458), Expect = 1e-43
 Identities = 83/139 (59%), Positives = 105/139 (75%)
 Frame = +3

Query: 75  VDIWSVQCGECFKWRLIPTEEEFEEIRSKFTKDPFVCSKKPGVSCNDPADIERDDTRTWV 254
           VD ++ QC +C KWR+I TEEE+EEIRSK  ++PF C++KPG+SC DPADIE D +RTWV
Sbjct: 4   VDTYAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNRKPGISCEDPADIECDASRTWV 63

Query: 255 IHKPGIPKTPSGFKRRLVMRKDFSKMDCYYDAANGKRLRASTDVLKFLDKFPKFKNDVSL 434
           I KPG+PKTP GFKR LV+R+DFSKMD YY    GK+LR   ++  FL+  PK+K  VS+
Sbjct: 64  IDKPGLPKTPGGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEANPKYKG-VSI 122

Query: 435 ADFSFTGPKIM*EYVLADV 491
            DF+FT PK+M E V  DV
Sbjct: 123 EDFNFTSPKVMEETVPEDV 141


>ref|XP_002331766.1| methyl binding domain protein [Populus trichocarpa]
           gi|224117178|ref|XP_002331767.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
           gi|222874359|gb|EEF11490.1| methyl binding domain
           protein [Populus trichocarpa]
           gi|222874360|gb|EEF11491.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
          Length = 182

 Score =  180 bits (456), Expect = 3e-43
 Identities = 84/162 (51%), Positives = 116/162 (71%)
 Frame = +3

Query: 3   KFEAADMEKKSQQSKRQSTNGITLVDIWSVQCGECFKWRLIPTEEEFEEIRSKFTKDPFV 182
           K  + +  K S ++ R +   I   D ++ QC +C KWR+IPTEEE+EEIRSK  ++P+V
Sbjct: 4   KERSPETPKTSPKNPRVAVRSI---DTYAAQCDKCLKWRVIPTEEEYEEIRSKMEENPYV 60

Query: 183 CSKKPGVSCNDPADIERDDTRTWVIHKPGIPKTPSGFKRRLVMRKDFSKMDCYYDAANGK 362
           C +KPGVSC+DPADIE + TRTWVI +PG+PKTP GFKR LV+R+DFSKMD YY    GK
Sbjct: 61  CDRKPGVSCDDPADIEYNATRTWVIDRPGVPKTPEGFKRSLVLRRDFSKMDAYYITPTGK 120

Query: 363 RLRASTDVLKFLDKFPKFKNDVSLADFSFTGPKIM*EYVLAD 488
           +LR   ++  F++  PK+K DV+L+ F+FT PK+M + +  D
Sbjct: 121 KLRTRNEIAAFIEANPKYK-DVNLSAFNFTSPKVMEDTIPED 161


>ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycine max]
           gi|255641529|gb|ACU21038.1| unknown [Glycine max]
          Length = 177

 Score =  169 bits (429), Expect = 3e-40
 Identities = 82/150 (54%), Positives = 104/150 (69%)
 Frame = +3

Query: 18  DMEKKSQQSKRQSTNGITLVDIWSVQCGECFKWRLIPTEEEFEEIRSKFTKDPFVCSKKP 197
           ++ K    SKR  + G   VDI++ QC  C KWR I T+EEFEEIRSK T++PF+CS+K 
Sbjct: 6   EISKTPSSSKRTLSQGS--VDIYAAQCKNCLKWREIDTQEEFEEIRSKVTEEPFLCSRKA 63

Query: 198 GVSCNDPADIERDDTRTWVIHKPGIPKTPSGFKRRLVMRKDFSKMDCYYDAANGKRLRAS 377
             SC++P DIE D TRTWVI KP +PKTP GFKR LV+RKD+SK+D YY    GK+LR  
Sbjct: 64  NSSCDEPGDIEYDSTRTWVIDKPNLPKTPQGFKRSLVLRKDYSKLDAYYITPAGKKLRTR 123

Query: 378 TDVLKFLDKFPKFKNDVSLADFSFTGPKIM 467
            ++  FL   P+FK  VS +DF F+ PKIM
Sbjct: 124 NEIAAFLKDNPEFKG-VSASDFDFSSPKIM 152


>ref|NP_191862.1| methyl-CPG-binding domain 4 protein [Arabidopsis thaliana]
           gi|75181050|sp|Q9LYB9.1|MBD4_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 4;
           Short=AtMBD4; Short=MBD04; AltName:
           Full=Methyl-CpG-binding protein MBD4
           gi|7573432|emb|CAB87748.1| putative protein [Arabidopsis
           thaliana] gi|34365655|gb|AAQ65139.1| At3g63030
           [Arabidopsis thaliana] gi|51971397|dbj|BAD44363.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646905|gb|AEE80426.1| methyl-CPG-binding domain 4
           protein [Arabidopsis thaliana]
          Length = 186

 Score =  168 bits (425), Expect = 1e-39
 Identities = 77/160 (48%), Positives = 110/160 (68%)
 Frame = +3

Query: 9   EAADMEKKSQQSKRQSTNGITLVDIWSVQCGECFKWRLIPTEEEFEEIRSKFTKDPFVCS 188
           E  ++ K ++   ++      L+D ++ QC  C KWR+I ++EE+E+IRSK  +DPF C 
Sbjct: 3   EEEEIGKPAKPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQ 62

Query: 189 KKPGVSCNDPADIERDDTRTWVIHKPGIPKTPSGFKRRLVMRKDFSKMDCYYDAANGKRL 368
           KK G+SC +PADI+ D +RTWVI KPG+PKTP GFKR LV+RKD+SKMD YY    GK+L
Sbjct: 63  KKQGMSCEEPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKL 122

Query: 369 RASTDVLKFLDKFPKFKNDVSLADFSFTGPKIM*EYVLAD 488
           R+  ++  F++  P+F+N   L DF+FT PK+M + V  D
Sbjct: 123 RSRNEIAAFVEANPEFRN-APLGDFNFTVPKVMEDTVPPD 161


Top