BLASTX nr result

ID: Salvia21_contig00033817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00033817
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   111   5e-23
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S...   108   6e-22
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   107   1e-21
gb|EEC84131.1| hypothetical protein OsI_30475 [Oryza sativa Indi...   106   2e-21
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   106   2e-21

>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score =  111 bits (278), Expect = 5e-23
 Identities = 66/159 (41%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
 Frame = +1

Query: 1   PSLLFISETKTCSRKCERWKFILDFEGHFVVEPRGSSGGLMLFWKSPLDVKIGSFSSGHI 180
           PSL+F+SETK   ++     + L F G F V   G SGGL LFW +   V +  F+S  I
Sbjct: 34  PSLVFLSETKMRDKQARNLMWSLGFSGSFAVSCEGLSGGLALFWTTAYTVSLRGFNSHFI 93

Query: 181 DCTV-TWDNKFWRFTGFYGNPDQSKRYHSWELLRRLAWGDQAEVPWFVGGDFNEILSQKE 357
           D  V T +   WR +  YG P +  R+  W LLRRL   DQ   PW   GDFNE+L   E
Sbjct: 94  DVLVSTEELPPWRISFVYGEPKRELRHFFWNLLRRL--HDQWRGPWLCCGDFNEVLCLDE 151

Query: 358 KSGGPKKPWPQMMGFRSALNECGLKSID-NDMAFTWSNR 471
             G  ++  P M  FRS L++CGL  +      FTWSN+
Sbjct: 152 HLGMRERSEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNK 190


>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
           gi|241941722|gb|EES14867.1| hypothetical protein
           SORBIDRAFT_07g013775 [Sorghum bicolor]
          Length = 589

 Score =  108 bits (269), Expect = 6e-22
 Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
 Frame = +1

Query: 1   PSLLFISETKTCSRKCERWKFILDFEGHFVVEPRGSSGGLMLFWKSPLDVKIGSFSSGHI 180
           P ++ +SETK+  ++    +  L FE   VV+  G  GGL + W+  +DV + S S  HI
Sbjct: 275 PDMMLLSETKSDEKRMRVLRMKLGFENMEVVDCVGKGGGLAVLWRRGVDVVLRSKSKNHI 334

Query: 181 DCTVTWDN-KFWRFTGFYGNPDQSKRYHSWELLRRLAWGDQAEVPWFVGGDFNEILSQKE 357
           D  V+      WRFTG YG P ++ ++ +W+LL+ LA   Q    W   GDFNE+L Q E
Sbjct: 335 DMEVSETRGNPWRFTGIYGEPQEAMKWKTWQLLQDLAAQHQNNQAWLCAGDFNEVLYQHE 394

Query: 358 KSGGPKKPWPQMMGFRSALNECGLKSID-NDMAFTWSNR 471
           K GG  +P   M  F+ AL    L  +      FTW N+
Sbjct: 395 KEGGVPRPQNSMDRFKQALEVSELHDLGFEGNVFTWRNK 433


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  107 bits (266), Expect = 1e-21
 Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
 Frame = +1

Query: 1   PSLLFISETKTCSRKCERWKFILDFEGHFVV----EPRGSSGGLMLFWKSPLDVKIGSFS 168
           P L+F+ ETK    +  + K  L  +G   V    +  G+ GG+ LFW + + V   S S
Sbjct: 308 PDLIFLIETKMTEAQMGKLKARLRMDGVLCVGRNEDNGGARGGMCLFWNNKVVVDYISSS 367

Query: 169 SGHIDCTVTW-DNKFWRFTGFYGNPDQSKRYHSWELLRRLAWGDQAEVPWFVGGDFNEIL 345
              I+  VTW D K  RFTGFYG+P+ S+R+ SW+LLR L        PW   GDFNEIL
Sbjct: 368 FYFINAMVTWEDKKKCRFTGFYGHPETSQRHLSWDLLRSLR--RVCSEPWLCCGDFNEIL 425

Query: 346 SQKEKSGGPKKPWPQMMGFRSALNECGLKSID-NDMAFTWSNR 471
              EK+G  ++   Q+ GFR A+ +CGL         +TW NR
Sbjct: 426 DFNEKTGAVQRSQRQIDGFRHAVEDCGLYEFAFTGFQYTWDNR 468


>gb|EEC84131.1| hypothetical protein OsI_30475 [Oryza sativa Indica Group]
          Length = 296

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/128 (46%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
 Frame = +1

Query: 91  VEPRGSSGGLMLFWKSPLDVKIGSFSSGHIDCTVTWDNKF-WRFTGFYGNPDQSKRYHSW 267
           V+  G+SG L LFWK  LD+ + S S  HID  V   + F WR+TG YG P Q  R ++W
Sbjct: 9   VDSDGASGSLALFWKKNLDLTVQSMSMNHIDAVVKEADGFIWRYTGVYGEPRQGDRKNTW 68

Query: 268 ELLRRLAWGDQAEVPWFVGGDFNEILSQKEKSGGPKKPWPQMMGFRSALNECGLKSID-N 444
           ELLR L    Q  +PW V G+FNEIL   EK GG ++    M  FR AL EC L  +   
Sbjct: 69  ELLRSLK--TQMALPWVVSGNFNEILFSCEKVGGSQRSESLMHNFRDALEECDLHDLGFV 126

Query: 445 DMAFTWSN 468
             AFTW N
Sbjct: 127 GDAFTWRN 134


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  106 bits (264), Expect = 2e-21
 Identities = 63/157 (40%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   PSLLFISETKTCSRKCERWKFILDFEGHFVVEPRGSSGGLMLFWKSPLDVKIGSFSSGHI 180
           P  +F+ ET   S + E+ K  L FEG F V+  G  GGL   W+      +  +S  HI
Sbjct: 335 PDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVGRGGGLAFLWRKAGMFSLLXYSQSHI 394

Query: 181 DCTVT-WDNKFWRFTGFYGNPDQSKRYHSWELLRRLAWGDQAEVPWFVGGDFNEILSQKE 357
           D  V+  D   WR TGFYG PD+S+R+ SW LLR L     + +PW   GDFN+I+  +E
Sbjct: 395 DMEVSEEDGLQWRVTGFYGFPDRSQRHLSWNLLRSLY--SASSLPWCCLGDFNDIVCNEE 452

Query: 358 KSGG-PKKPWPQMMGFRSALNECGLKSID-NDMAFTW 462
           K G  P  PW  + GF +AL++C L+ +      FTW
Sbjct: 453 KRGSVPHPPW-LIRGFCAALSDCQLQDLXLKGYPFTW 488


Top