BLASTX nr result

ID: Salvia21_contig00033034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00033034
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513583.1| pentatricopeptide repeat-containing protein,...   122   4e-26
ref|XP_003608051.1| Pentatricopeptide repeat-containing protein ...   116   2e-24
ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]   107   1e-21
ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_002513583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547491|gb|EEF48986.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/107 (54%), Positives = 75/107 (70%)
 Frame = +1

Query: 1   QRTVVSWNTMITGYYKWNFTTSALGLISLMHHSNVKFNDTTFSTSLSVCGRAQSLINGKQ 180
           QRT VSWNTMI+ Y KW     +  L+SLMH SN + ++TTFST LSVC R QS  +GKQ
Sbjct: 63  QRTSVSWNTMISSYLKWGKFKESFSLLSLMHRSNTQLDETTFSTILSVCTRTQSFCDGKQ 122

Query: 181 VQGLLMKSGYQRFKLVGSGLLYLYANSCHIGDGRKLFDELHQENELL 321
           +  L++KSG   F+LVGS LLY Y N   I D +++FDELH +NE++
Sbjct: 123 IHCLVLKSGCGSFELVGSVLLYFYGNCSQIDDAKRVFDELHDKNEVV 169



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1   QRTVVSWNTMITGYYKWNFTTS-ALGLISLMHHSN-VKFNDTTFSTSLSVCGRAQSLING 174
           ++ VVSW+ +I+GY K    +  AL L  LM  S  V  N+ T  + + VCG+  +L  G
Sbjct: 195 KKEVVSWSKLISGYAKSEVRSEKALELFQLMRESGEVLPNEFTLDSVIRVCGKLGALSEG 254

Query: 175 KQVQGLLMKSGYQRFKLVGSGLLYLYANSCHIGDGRKLFD 294
             V G+L+K+G++  + +   L+  Y +   I D ++++D
Sbjct: 255 MVVHGILIKTGFEFDQSISGALVQFYCDCEAIDDAKRIYD 294



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/104 (31%), Positives = 50/104 (48%)
 Frame = +1

Query: 1   QRTVVSWNTMITGYYKWNFTTSALGLISLMHHSNVKFNDTTFSTSLSVCGRAQSLINGKQ 180
           QR  V+WN+M++GY +      AL L   M  S+V    +TFS     C    SL  GK 
Sbjct: 392 QRNPVTWNSMLSGYVQNEQHEEALKLYVTMKRSSVDCTRSTFSVLFRACSYIGSLQQGKM 451

Query: 181 VQGLLMKSGYQRFKLVGSGLLYLYANSCHIGDGRKLFDELHQEN 312
           +   L+K+ +     VG+ L+ +Y+    I D +K F  +   N
Sbjct: 452 LHANLIKTPFASNVYVGTSLVDMYSKCGSIFDAKKSFSSISAPN 495


>ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509106|gb|AES90248.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 763

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/106 (54%), Positives = 69/106 (65%)
 Frame = +1

Query: 4   RTVVSWNTMITGYYKWNFTTSALGLISLMHHSNVKFNDTTFSTSLSVCGRAQSLINGKQV 183
           RTV SWNTMI+GY +W   T AL L+S MH S VKFN+ +FS  LS C R  SL  GKQ+
Sbjct: 66  RTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQI 125

Query: 184 QGLLMKSGYQRFKLVGSGLLYLYANSCHIGDGRKLFDELHQENELL 321
             LL KSGYQRF  VGS LL+ Y   C I +   +F+EL  EN +L
Sbjct: 126 HSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVL 171



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/104 (28%), Positives = 50/104 (48%)
 Frame = +1

Query: 1   QRTVVSWNTMITGYYKWNFTTSALGLISLMHHSNVKFNDTTFSTSLSVCGRAQSLINGKQ 180
           +R  V+WN+M++GY      + AL L   M    V+++ +TFS     C    S   G+ 
Sbjct: 395 ERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQL 454

Query: 181 VQGLLMKSGYQRFKLVGSGLLYLYANSCHIGDGRKLFDELHQEN 312
           +   L K+ YQ    VG+ L+  Y+   H+ D ++ F  +   N
Sbjct: 455 LHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 498


>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|302143682|emb|CBI22543.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/107 (50%), Positives = 76/107 (71%)
 Frame = +1

Query: 1   QRTVVSWNTMITGYYKWNFTTSALGLISLMHHSNVKFNDTTFSTSLSVCGRAQSLINGKQ 180
           QRTVVSWNTMI+ Y K    + AL L+  MH S++K +++TFS+ LSVC R + L +GK 
Sbjct: 60  QRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKL 119

Query: 181 VQGLLMKSGYQRFKLVGSGLLYLYANSCHIGDGRKLFDELHQENELL 321
           +  L++KSG + F+LVGS LLY YA+   IG+ R++FD L + NE+L
Sbjct: 120 IHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVL 166


>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/107 (50%), Positives = 76/107 (71%)
 Frame = +1

Query: 1   QRTVVSWNTMITGYYKWNFTTSALGLISLMHHSNVKFNDTTFSTSLSVCGRAQSLINGKQ 180
           QRTVVSWNTMI+ Y K    + AL L+  MH S++K +++TFS+ LSVC R + L +GK 
Sbjct: 100 QRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKL 159

Query: 181 VQGLLMKSGYQRFKLVGSGLLYLYANSCHIGDGRKLFDELHQENELL 321
           +  L++KSG + F+LVGS LLY YA+   IG+ R++FD L + NE+L
Sbjct: 160 IHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVL 206


>ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/106 (50%), Positives = 72/106 (67%)
 Frame = +1

Query: 4   RTVVSWNTMITGYYKWNFTTSALGLISLMHHSNVKFNDTTFSTSLSVCGRAQSLINGKQV 183
           R+VVSWN MI+GY K+   + AL L S MH +NVK N+TTFS+ LS+C  +     GKQ 
Sbjct: 66  RSVVSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQF 125

Query: 184 QGLLMKSGYQRFKLVGSGLLYLYANSCHIGDGRKLFDELHQENELL 321
             L++KSG Q F+ VGS L+Y YAN   I   +++FDELH +N+LL
Sbjct: 126 HCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLL 171


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