BLASTX nr result

ID: Salvia21_contig00032294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00032294
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...   123   6e-26
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin...   116   5e-24
ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein ...   113   5e-23
ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein ...   109   9e-22
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab...   109   9e-22

>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score =  123 bits (308), Expect = 6e-26
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
 Frame = +3

Query: 6   VESSQRMRFLQKICPALTYPLCRCHTRRHMQLFVG--GLSYDTNESVLKDAFENYGEIVE 179
           ++S  R R L    P   + + R   R+   LF+G  GLSYDTNE++LKDAF  YGEI+E
Sbjct: 1   MQSLNRFRCLSPASPCFRWLVSRGSCRK---LFIGDAGLSYDTNETILKDAFGQYGEIIE 57

Query: 180 VKVICDRVSGKSRGYGFVRYSSEAAANKALKEMDGLLLDGRNIRIHYAHRG 332
           VKVICD VSGKS+GYGFV+++S+  A+ ALKEMDG  LDGRNIR+ YAH+G
Sbjct: 58  VKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 108


>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
           gi|255628821|gb|ACU14755.1| unknown [Glycine max]
          Length = 146

 Score =  116 bits (291), Expect = 5e-24
 Identities = 60/97 (61%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
 Frame = +3

Query: 51  ALTYPLCRCHTRRH---MQLFVGGLSYDTNESVLKDAFENYGEIVEVKVICDRVSGKSRG 221
           AL + L R    RH    +LFV GLSYDTNE +L+DAF  +GEI+EVKVICD V+GKSRG
Sbjct: 41  ALRFHLPRFLCVRHHSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRG 100

Query: 222 YGFVRYSSEAAANKALKEMDGLLLDGRNIRIHYAHRG 332
           YGFVR+ SE  A  A KEM+G +LDGR IR+ YAH+G
Sbjct: 101 YGFVRFVSETTAAAARKEMNGQILDGRRIRVSYAHKG 137


>ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 146

 Score =  113 bits (283), Expect = 5e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
 Frame = +3

Query: 78  HTRRH--MQLFVGGLSYDTNESVLKDAFENYGEIVEVKVICDRVSGKSRGYGFVRYSSEA 251
           + R H  ++LFV GLSYDTNE VL+DAF  +GEI+EVKVICD V+GKSRGYGFVR+ SE 
Sbjct: 51  YVRHHSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSET 110

Query: 252 AANKALKEMDGLLLDGRNIRIHYAHRG 332
            A    KEM+G +LDGR IR+ YAH+G
Sbjct: 111 IAAATHKEMNGQILDGRCIRVSYAHKG 137


>ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 109

 Score =  109 bits (272), Expect = 9e-22
 Identities = 51/79 (64%), Positives = 64/79 (81%)
 Frame = +3

Query: 96  QLFVGGLSYDTNESVLKDAFENYGEIVEVKVICDRVSGKSRGYGFVRYSSEAAANKALKE 275
           +LFVGGLSYDTNE  LKDAF  +G + EVKVIC  V+G+S+GYGFV++SSE+ A  AL++
Sbjct: 31  KLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRSKGYGFVKFSSESEAAAALEK 90

Query: 276 MDGLLLDGRNIRIHYAHRG 332
           M   LLDGRNIR+HYA+ G
Sbjct: 91  MSNELLDGRNIRVHYANSG 109


>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
           lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
           ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score =  109 bits (272), Expect = 9e-22
 Identities = 52/76 (68%), Positives = 61/76 (80%)
 Frame = +3

Query: 96  QLFVGGLSYDTNESVLKDAFENYGEIVEVKVICDRVSGKSRGYGFVRYSSEAAANKALKE 275
           +LFVGGLSYDTNE VLK+ FE YGE++EVKVICD  SGKS+GYGFV + SE AA  AL  
Sbjct: 27  KLFVGGLSYDTNEPVLKNEFEKYGEVIEVKVICDHKSGKSKGYGFVLFDSEEAAASALAS 86

Query: 276 MDGLLLDGRNIRIHYA 323
           M+  LL+GRNIR+ YA
Sbjct: 87  MNNQLLEGRNIRVEYA 102


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