BLASTX nr result
ID: Salvia21_contig00032253
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00032253
(1262 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAZ40333.1| hypothetical protein [Raphanus sativus] 160 6e-37
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 143 1e-31
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 142 1e-31
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 142 1e-31
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 142 2e-31
>emb|CAZ40333.1| hypothetical protein [Raphanus sativus]
Length = 785
Score = 160 bits (405), Expect = 6e-37
Identities = 86/181 (47%), Positives = 111/181 (61%)
Frame = -3
Query: 744 ITRGISFSKSWDLRLSQAEFAHNSALNRSTGFCPFQLVYAVVPRGPVDLMPLXXXXXXXX 565
I +G+ S +LR Q L S FC +VY +VPRGP+DL
Sbjct: 607 IMQGLVVEISHELRTMQIR------LQVSHRFC---VVYGIVPRGPLDLSTAPDKTRLHG 657
Query: 564 XXAELVAELSRLHEAARDHLETANARYKRAADRHRRDVHFEVGDYVWVVLTRDRFPAHEY 385
+ + L +H+ A+ HLE+A +YK AAD R ++ FE GD VWV LT++R P +Y
Sbjct: 658 EAIDFITNLQDVHKLAQSHLESATTKYKLAADTKRCELIFEPGDLVWVYLTKERLPLRDY 717
Query: 384 NKLASRKIGPLEILEKINPNAYRVRLPSHLRTSDVFNVKHLVPFHGDNSSGDEADDDSRA 205
NKL S+K+GP+E++E+INPN YRVRLPSHLRTSDVFN+KHL PF GDN D DS A
Sbjct: 718 NKLKSKKLGPVEVVERINPNVYRVRLPSHLRTSDVFNIKHLSPFKGDND-----DPDSWA 772
Query: 204 N 202
N
Sbjct: 773 N 773
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 143 bits (360), Expect = 1e-31
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Frame = -3
Query: 720 KSWDLRLSQAEFAHNSALNRSTGFCPFQLVYAVVPRGPVDLMPLXXXXXXXXXXAELVAE 541
K W+ L EFA+N +L+ +T CPFQ+VY ++PR P+DLMPL +
Sbjct: 1335 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1394
Query: 540 LSRLHEAARDHLETANARYKRAADRHRRDVHFEVGDYVWVVLTRDRFPAHEYNKLASRKI 361
+ +LHE ++++E NA+YK A D+ RR+++FE GD VW+ L ++RFP +KL R
Sbjct: 1395 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1454
Query: 360 GPLEILEKINPNAYRVRLPSHLRTSDVFNVKHLVPFHGD-------NSSGDEADDDSRAN 202
GP ++L KIN NAY++ LP+ R S FNV L P+ G+ + E +DD N
Sbjct: 1455 GPFKVLAKINENAYKIDLPADFRVSSTFNVADLKPYLGEEDELESRTTQMQEGEDDEDIN 1514
Score = 59.3 bits (142), Expect = 2e-06
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = -1
Query: 1256 LRTEFLPFNYSRTLYERLQNLRQGSRTVDEYSREFYQLLSRNDLSENADQLISRYIGGLR 1077
+R F+P Y+R L RLQ LRQG ++V+EY +E L R +L E D ++R++GGL
Sbjct: 322 MRARFVPSYYARDLLNRLQQLRQGVKSVEEYYQELQMGLLRCNLEETEDAAMARFLGGLN 381
Query: 1076 LPFQDTLNMFVPVSVSEAHQRALLLEQQF-SRRSSA 972
D ++ V +++ A E++ RR+SA
Sbjct: 382 REIYDIVDYKVYTNMTRLFHLACKAEREVQGRRASA 417
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 142 bits (359), Expect = 1e-31
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Frame = -3
Query: 720 KSWDLRLSQAEFAHNSALNRSTGFCPFQLVYAVVPRGPVDLMPLXXXXXXXXXXAELVAE 541
K W+ L EFA+N +L+ +T CPFQ+VY ++PR P+DLMPL +
Sbjct: 1496 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1555
Query: 540 LSRLHEAARDHLETANARYKRAADRHRRDVHFEVGDYVWVVLTRDRFPAHEYNKLASRKI 361
+ +LHE ++++E NA+YK A D+ RR+++FE GD VW+ L ++RFP +KL R
Sbjct: 1556 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRKERFPDLRKSKLMPRAD 1615
Query: 360 GPLEILEKINPNAYRVRLPSHLRTSDVFNVKHLVPFHGD-------NSSGDEADDDSRAN 202
GP ++L KIN NAY++ LP+ R S FNV L P+ G+ + E +DD N
Sbjct: 1616 GPFKVLAKINENAYKIDLPADFRVSPTFNVADLKPYLGEEDELESRTTQMQEGEDDEDIN 1675
Score = 57.8 bits (138), Expect = 6e-06
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = -1
Query: 1256 LRTEFLPFNYSRTLYERLQNLRQGSRTVDEYSREFYQLLSRNDLSENADQLISRYIGGLR 1077
+R F+P Y+R L RLQ LRQG+++V+EY +E L R +L E D ++R++GGL
Sbjct: 586 MRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDTAMARFLGGLN 645
Query: 1076 LPFQDTLNMFVPVSVSEAHQRALLLEQQF-SRRSSA 972
D ++ +++ A E++ RR+SA
Sbjct: 646 REIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASA 681
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 142 bits (359), Expect = 1e-31
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Frame = -3
Query: 720 KSWDLRLSQAEFAHNSALNRSTGFCPFQLVYAVVPRGPVDLMPLXXXXXXXXXXAELVAE 541
K W+ L EFA+N +L+ +T CPFQ+VY ++PR P+DLMPL +
Sbjct: 1505 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1564
Query: 540 LSRLHEAARDHLETANARYKRAADRHRRDVHFEVGDYVWVVLTRDRFPAHEYNKLASRKI 361
+ +LHE ++++E NA+YK A D+ RR+++FE GD VW+ L ++RFP +KL R
Sbjct: 1565 MLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDMVWLHLRKERFPDLRKSKLMPRAD 1624
Query: 360 GPLEILEKINPNAYRVRLPSHLRTSDVFNVKHLVPFHGD-------NSSGDEADDDSRAN 202
GP ++L KIN NAY++ LP+ R S FNV L P+ G+ + E +DD N
Sbjct: 1625 GPFKVLAKINENAYKIDLPADFRVSPTFNVADLKPYLGEEDELESRTTQMQEGEDDEDIN 1684
Score = 57.8 bits (138), Expect = 6e-06
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = -1
Query: 1256 LRTEFLPFNYSRTLYERLQNLRQGSRTVDEYSREFYQLLSRNDLSENADQLISRYIGGLR 1077
+R F+P Y+R L RLQ LRQG+++V+EY +E L R +L E D ++R++GGL
Sbjct: 595 MRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDTAMARFLGGLN 654
Query: 1076 LPFQDTLNMFVPVSVSEAHQRALLLEQQF-SRRSSA 972
D ++ +++ A E++ RR+SA
Sbjct: 655 REIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASA 690
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 142 bits (357), Expect = 2e-31
Identities = 67/159 (42%), Positives = 99/159 (62%)
Frame = -3
Query: 720 KSWDLRLSQAEFAHNSALNRSTGFCPFQLVYAVVPRGPVDLMPLXXXXXXXXXXAELVAE 541
K W+ L EFA+N +L+ +T CPFQ+VY ++PR P+DLMPL
Sbjct: 1389 KMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAEL 1448
Query: 540 LSRLHEAARDHLETANARYKRAADRHRRDVHFEVGDYVWVVLTRDRFPAHEYNKLASRKI 361
+ +LHE ++++E NARYK A+D+ R++++FE GD VW+ L ++RFP +KL R
Sbjct: 1449 MLKLHETTKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRAD 1508
Query: 360 GPLEILEKINPNAYRVRLPSHLRTSDVFNVKHLVPFHGD 244
GP ++LEKIN NAYR+ LP+ S FN+ L P+ G+
Sbjct: 1509 GPFKVLEKINDNAYRLDLPADFGVSPTFNIADLKPYLGE 1547
Score = 57.0 bits (136), Expect = 1e-05
Identities = 29/97 (29%), Positives = 53/97 (54%)
Frame = -1
Query: 1256 LRTEFLPFNYSRTLYERLQNLRQGSRTVDEYSREFYQLLSRNDLSENADQLISRYIGGLR 1077
+R F+P Y+R + +LQ LRQG+++V+EY +E + R ++ E + ++R++GGL
Sbjct: 222 MRARFVPSYYARDMLNKLQQLRQGTKSVEEYYQELQMGMLRCNIEEGEESAMARFLGGLN 281
Query: 1076 LPFQDTLNMFVPVSVSEAHQRALLLEQQFSRRSSAPR 966
QD L +V+ A E++ R ++ R
Sbjct: 282 REIQDILAYKDYANVTRLFHLACKAEREVQGRRASAR 318