BLASTX nr result

ID: Salvia21_contig00031976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00031976
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE02823.1| GRAS1 [Nicotiana tabacum]                               74   1e-11
ref|NP_001234310.1| GRAS4 protein [Solanum lycopersicum] gi|8947...    69   3e-10
ref|XP_002879199.1| scarecrow transcription factor family protei...    55   4e-06
ref|XP_002892404.1| predicted protein [Arabidopsis lyrata subsp....    54   1e-05

>gb|ABE02823.1| GRAS1 [Nicotiana tabacum]
          Length = 644

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +1

Query: 370 DYFDGVFDYIKQMLMEEDDLDHRPCMFHDCSALQAAEKYFSDAL 501
           D+ D ++ YI QMLMEE+DL+++PCMFHDC ALQAAEKYFSD L
Sbjct: 76  DHSDAMYKYISQMLMEEEDLEYKPCMFHDCMALQAAEKYFSDVL 119


>ref|NP_001234310.1| GRAS4 protein [Solanum lycopersicum] gi|89474466|gb|ABD72960.1|
           GRAS4 [Solanum lycopersicum]
          Length = 666

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = +1

Query: 370 DYFDGVFDYIKQMLMEEDDLDHRPCMFHDCSALQAAEKYFSDAL 501
           DY D ++ ++ QMLMEEDDL+++PCMFHDC ALQA E+Y SD L
Sbjct: 68  DYSDAMYKFLSQMLMEEDDLENKPCMFHDCMALQAKERYLSDVL 111


>ref|XP_002879199.1| scarecrow transcription factor family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325038|gb|EFH55458.1| scarecrow
           transcription factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1321

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/66 (45%), Positives = 37/66 (56%)
 Frame = +1

Query: 304 ECGGYNPWQAAVHHSSEAPVPCDYFDGVFDYIKQMLMEEDDLDHRPCMFHDCSALQAAEK 483
           E G   P        S A    D+ D V  YI Q+LMEED ++ +PCMFHD  +LQAAEK
Sbjct: 33  ETGSVPPPPEPYSQQSLASADADFSDSVLKYISQVLMEED-MEDKPCMFHDALSLQAAEK 91

Query: 484 YFSDAL 501
              +AL
Sbjct: 92  SLYEAL 97


>ref|XP_002892404.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338246|gb|EFH68663.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1493

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 316 YNPWQAAVHHSSEAPVP-CDYFDGVFDYIKQMLMEEDDLDHRPCMFHDCSALQAAEKYFS 492
           YN  +AA      +P    D+ D V  YI Q+LMEED ++ +PCMFHD  ALQAAEK   
Sbjct: 54  YNNNEAASGDLLSSPSDDADFSDSVLKYISQVLMEED-MEEKPCMFHDALALQAAEKSLY 112

Query: 493 DAL 501
           +AL
Sbjct: 113 EAL 115


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