BLASTX nr result

ID: Salvia21_contig00029380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00029380
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   115   5e-24
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   115   5e-24
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   112   4e-23
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...    98   1e-18

>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  115 bits (289), Expect = 5e-24
 Identities = 63/131 (48%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
 Frame = +2

Query: 221 MGRRKQIRPRRTGRTVEGL----TSESEFNKDGVAHHGKDGLIAVEEPFFVEIDKSSWVC 388
           MGRRKQ +P R+   VE L    T+E E N     H   D +   E P FVE+D++ W  
Sbjct: 1   MGRRKQPKPHRSVGVVERLETQETAEGELNSQQ-EHAQGDEVGDAETPLFVEVDRTGWGS 59

Query: 389 EEHYDISEIVLRNLTVSEEFCGYNLSEEFYSDSSCFLRFKLSNVNEHLVRMKLGNWPVLP 568
            EH DISEIVL +L + EEF GY+L E FY +S C LRF+L N N+ + R++LG+WPV+ 
Sbjct: 60  GEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQFVGRIRLGHWPVVA 119

Query: 569 ESDICLQFVMK 601
            S I L+FV K
Sbjct: 120 ASSISLEFVEK 130


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
           gi|355516770|gb|AES98393.1| ATP-dependent helicase,
           putative [Medicago truncatula]
          Length = 1764

 Score =  115 bits (289), Expect = 5e-24
 Identities = 59/131 (45%), Positives = 84/131 (64%)
 Frame = +2

Query: 221 MGRRKQIRPRRTGRTVEGLTSESEFNKDGVAHHGKDGLIAVEEPFFVEIDKSSWVCEEHY 400
           MGRRK  +P R+G  +    + +E   +       D    + +P+FVE+D+S W+ +EH 
Sbjct: 1   MGRRKS-KPHRSGGIIVETNASAETELEVGGKENND-FGDIYKPYFVEVDRSGWLSDEHL 58

Query: 401 DISEIVLRNLTVSEEFCGYNLSEEFYSDSSCFLRFKLSNVNEHLVRMKLGNWPVLPESDI 580
           DISEIVLR+L + E F G+ LSE+FY D    LRF+L N+   L R+KLG+WPVLP +DI
Sbjct: 59  DISEIVLRDLNIGEGFYGFELSEDFYQDPQFSLRFRLCNIGSDLGRIKLGHWPVLPYTDI 118

Query: 581 CLQFVMKCSVE 613
            L+FV + SV+
Sbjct: 119 HLEFVKRASVD 129


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  115 bits (289), Expect = 5e-24
 Identities = 63/131 (48%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
 Frame = +2

Query: 221 MGRRKQIRPRRTGRTVEGL----TSESEFNKDGVAHHGKDGLIAVEEPFFVEIDKSSWVC 388
           MGRRKQ +P R+   VE L    T+E E N     H   D +   E P FVE+D++ W  
Sbjct: 1   MGRRKQPKPHRSVGVVERLETQETAEGELNSQQ-EHAQGDEVGDAETPLFVEVDRTGWGS 59

Query: 389 EEHYDISEIVLRNLTVSEEFCGYNLSEEFYSDSSCFLRFKLSNVNEHLVRMKLGNWPVLP 568
            EH DISEIVL +L + EEF GY+L E FY +S C LRF+L N N+ + R++LG+WPV+ 
Sbjct: 60  GEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQFVGRIRLGHWPVVA 119

Query: 569 ESDICLQFVMK 601
            S I L+FV K
Sbjct: 120 ASSISLEFVEK 130


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  112 bits (281), Expect = 4e-23
 Identities = 56/136 (41%), Positives = 88/136 (64%), Gaps = 5/136 (3%)
 Frame = +2

Query: 221 MGRRKQIRPRRTGRTV--EGLTSESEFNKDGVAHHGKD---GLIAVEEPFFVEIDKSSWV 385
           MGR+K  +P+R G  +      +E+E +K  V   GK+       +++P+FVE+D+  W+
Sbjct: 1   MGRQKS-KPQRAGGIILETNAAAETELDKQNVIEGGKETKGDSSGIDKPYFVEVDRCGWL 59

Query: 386 CEEHYDISEIVLRNLTVSEEFCGYNLSEEFYSDSSCFLRFKLSNVNEHLVRMKLGNWPVL 565
             EH DISE+VL +L + E F G+ LSE+FY D    LRF++ NV+  L R+KLG+WPV+
Sbjct: 60  SSEHLDISEVVLSDLNLREGFSGFELSEDFYRDQQYLLRFQVCNVSNVLGRIKLGHWPVI 119

Query: 566 PESDICLQFVMKCSVE 613
           P +DI L+FV + +++
Sbjct: 120 PYTDIHLEFVRRVTID 135


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
 Frame = +2

Query: 221 MGRRKQIRPRRTGRTV---EGLTSESEFNKDGVAHHGKDG----LIAVEE-PFFVEIDKS 376
           MGRRKQ RP R+G  +       S S   K+       D     L+ ++E P+FVE++++
Sbjct: 1   MGRRKQARPHRSGGLIIQNNAAASASAELKNQRKASSSDAQPTELVGIDEQPYFVEVERN 60

Query: 377 SWVCEEHYDISEIVLRNLTVSEEFCGYNLSEEFYSDSSCFLRFKLSNVNEH-LVRMKLGN 553
           SW    H D SE+VL  L + +E+  + +++ FY DS   LRF++SNV +  L R+KLG+
Sbjct: 61  SWASNHHRDASELVLHGLNLRQEYSSFRVTDGFYHDSKYSLRFRVSNVKQSVLSRIKLGH 120

Query: 554 WPVLPESDICLQFVMKCSVE 613
           WPV   SDI L+ + K  VE
Sbjct: 121 WPVFSSSDISLELIEKSMVE 140


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