BLASTX nr result
ID: Salvia21_contig00028895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00028895 (547 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 66 4e-09 ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 62 6e-08 gb|AEL99013.1| transcription elongation factor (TFIIS) family pr... 59 5e-07 gb|AEL99012.1| transcription elongation factor (TFIIS) family pr... 59 5e-07 ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 59 6e-07 >ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera] gi|296081186|emb|CBI18212.3| unnamed protein product [Vitis vinifera] Length = 332 Score = 65.9 bits (159), Expect = 4e-09 Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Frame = -3 Query: 542 LLDMNTTFTTLKETEIGKHVTKLRKHSSNEXXXXXXXXXXXXRDTVDEWVRQNTPIEEEA 363 L DM+ TF LKET+IG+HV +LRKH SNE +D VDEWV+ +TP E A Sbjct: 130 LADMDITFKALKETDIGRHVNRLRKHPSNEVRRLVKQLVRKWKDLVDEWVKLSTPGETTA 189 Query: 362 TEF---NDQASYLFAKDDARIHNSVKDVSCHSTP 270 + D K + +H+ V D + P Sbjct: 190 SAIVADGDSPQQNHLKSTSNVHHQVPDFAYSPNP 223 >ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c-like [Cucumis sativus] gi|449528150|ref|XP_004171069.1| PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c-like [Cucumis sativus] Length = 345 Score = 62.0 bits (149), Expect = 6e-08 Identities = 31/65 (47%), Positives = 39/65 (60%) Frame = -3 Query: 542 LLDMNTTFTTLKETEIGKHVTKLRKHSSNEXXXXXXXXXXXXRDTVDEWVRQNTPIEEEA 363 L DM+ TF LKET+IG+HV +LRKH SN+ ++ VDEWVR N P E+ A Sbjct: 143 LADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTA 202 Query: 362 TEFND 348 T D Sbjct: 203 TLLAD 207 >gb|AEL99013.1| transcription elongation factor (TFIIS) family protein, partial [Silene latifolia] Length = 278 Score = 58.9 bits (141), Expect = 5e-07 Identities = 28/54 (51%), Positives = 34/54 (62%) Frame = -3 Query: 542 LLDMNTTFTTLKETEIGKHVTKLRKHSSNEXXXXXXXXXXXXRDTVDEWVRQNT 381 L DM+ TF LKET+IG+HV +LRKH SN+ +D VDEWVR NT Sbjct: 82 LADMDITFKALKETDIGRHVNRLRKHPSNDVRQLVKLLVRKWKDLVDEWVRANT 135 >gb|AEL99012.1| transcription elongation factor (TFIIS) family protein, partial [Silene latifolia] Length = 278 Score = 58.9 bits (141), Expect = 5e-07 Identities = 28/54 (51%), Positives = 34/54 (62%) Frame = -3 Query: 542 LLDMNTTFTTLKETEIGKHVTKLRKHSSNEXXXXXXXXXXXXRDTVDEWVRQNT 381 L DM+ TF LKET+IG+HV +LRKH SN+ +D VDEWVR NT Sbjct: 82 LADMDITFKALKETDIGRHVNRLRKHPSNDVRQLVKLLVRKWKDLVDEWVRANT 135 >ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis] gi|223530431|gb|EEF32318.1| conserved hypothetical protein [Ricinus communis] Length = 362 Score = 58.5 bits (140), Expect = 6e-07 Identities = 32/91 (35%), Positives = 45/91 (49%) Frame = -3 Query: 542 LLDMNTTFTTLKETEIGKHVTKLRKHSSNEXXXXXXXXXXXXRDTVDEWVRQNTPIEEEA 363 L DM+ TF LKET+IG+HV +LRKH+SN+ +D VDEWV+ N P + + Sbjct: 156 LADMDITFKALKETDIGRHVNQLRKHTSNDVRRLVKQLVRKWKDIVDEWVKLNPPGQHAS 215 Query: 362 TEFNDQASYLFAKDDARIHNSVKDVSCHSTP 270 + K H+ V D + P Sbjct: 216 SGLMADGDSPRQKFPQNGHHQVPDFAYSPNP 246