BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00027515
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi...   365   1e-98
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   363   4e-98
ref|XP_002522334.1| pentatricopeptide repeat-containing protein,...   362   1e-97
ref|NP_195434.1| pentatricopeptide repeat-containing protein [Ar...   339   8e-91
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ...   338   2e-90

>ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
            At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score =  365 bits (936), Expect = 1e-98
 Identities = 186/339 (54%), Positives = 233/339 (68%), Gaps = 6/339 (1%)
 Frame = +3

Query: 60   KLLRSHSCLYSSTPHSIQPTISPKPF---FLPSGDHGPSANR---DASFIESIQHLCQQK 221
            KL      + SS+  S QP +S  P    F  SG       R   D +F E+I  LC+QK
Sbjct: 14   KLFSPRRAICSSSTTS-QPQLSKPPIHNTFFKSGAKDELVKRLCKDNNFKEAIDILCEQK 72

Query: 222  RLKDVIPLLENQVCPPPVAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFISNKILE 401
            RL++ I +L++   P    YS +LQLC++ RALDEG +VH H   SGF  G  ISN+IL+
Sbjct: 73   RLREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILD 132

Query: 402  LYCKCGSMSNARKLFDEMGEKDLCSWNTLISGYARMGMLLEARELFDGMSERDNFSWTAM 581
            +Y KC S+ NA++LFDEM E+DLCSWN +ISGYA+ G L EAR+LFD M+ERDNFSWTAM
Sbjct: 133  MYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAM 192

Query: 582  ISGYVKHKQPAHALELYRLMQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHGRIIRTG 761
             SGYV+H Q   ALEL+R MQR+EN  CNKFT+               GKEIHG I+R G
Sbjct: 193  TSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIG 252

Query: 762  LDSDAVVSSALLDVYGKCGSLNEARYIFDRVQGKDIVLWTSMIDRYFGDGRWEDGLSLFS 941
            LD D VV SAL D+YGKCGS+ EAR+IFD+   +D+V WT+MIDRYF +GR E+G +LFS
Sbjct: 253  LDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFS 312

Query: 942  DFLRCGIRPNEYTFAGVLNACARQTAEELGREVHGHMVR 1058
            D L+ GI PNE+TF+GVLNACA   AEELG++VHG+M R
Sbjct: 313  DLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTR 351



 Score =  117 bits (294), Expect = 4e-24
 Identities = 70/242 (28%), Positives = 111/242 (45%)
 Frame = +3

Query: 312  RALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGSMSNARKLFDEMGEKDLCSWNTLI 491
            ++L  GK +H HI R G      + + + ++Y KCGS+                      
Sbjct: 236  QSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIG--------------------- 274

Query: 492  SGYARMGMLLEARELFDGMSERDNFSWTAMISGYVKHKQPAHALELYRLMQRNENLMCNK 671
                      EAR +FD   +RD  SWTAMI  Y K  +      L+  + ++  +  N+
Sbjct: 275  ----------EARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKS-GIWPNE 323

Query: 672  FTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDSDAVVSSALLDVYGKCGSLNEARYIFDR 851
            FT                GK++HG + R G D  +  +S L+ +Y KCG++  AR +F+ 
Sbjct: 324  FTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNG 383

Query: 852  VQGKDIVLWTSMIDRYFGDGRWEDGLSLFSDFLRCGIRPNEYTFAGVLNACARQTAEELG 1031
            +   D+V WTS+I  Y  +G+ ++ L  F   L+ G +P+  TF GVL+AC      + G
Sbjct: 384  MPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKG 443

Query: 1032 RE 1037
             E
Sbjct: 444  LE 445



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
 Frame = +3

Query: 243 LLENQVCPPPVAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGS 422
           LL++ + P    +S +L  C +  A + GK+VH ++ R GF   +F ++ ++ +Y KCG+
Sbjct: 314 LLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGN 373

Query: 423 MSNARKLFDEMGEKDLCSWNTLISGYARMGMLLEARELFDGM----SERDNFSWTAMISG 590
           + NAR++F+ M   DL SW +LISGYA+ G   EA + F+ +    ++ D+ ++  ++S 
Sbjct: 374 IKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSA 433

Query: 591 YVKHKQPAHALELYRLMQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDS 770
                     LE +  +                             KE H      GL  
Sbjct: 434 CTHAGLVDKGLEYFDSI-----------------------------KEKH------GLTH 458

Query: 771 DAVVSSALLDVYGKCGSLNEARYIFDRVQ-GKDIVLWTSMI 890
            A   + L+D+  + G L EA  I D++    D  LW S++
Sbjct: 459 TADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLL 499


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
            predicted protein [Populus trichocarpa]
          Length = 676

 Score =  363 bits (932), Expect = 4e-98
 Identities = 182/322 (56%), Positives = 227/322 (70%), Gaps = 3/322 (0%)
 Frame = +3

Query: 102  HSIQPTISPKPFFLPSGDHG---PSANRDASFIESIQHLCQQKRLKDVIPLLENQVCPPP 272
            HS  P   PK FF  +       P       F E+I  LCQQ RLK+ + +L     P  
Sbjct: 12   HSSSP-FQPKTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSA 70

Query: 273  VAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGSMSNARKLFDE 452
              YS ++Q CI+ R L +GK+VH HI  SGF  G FI N++LE+Y KC S+ +++KLFDE
Sbjct: 71   SVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDE 130

Query: 453  MGEKDLCSWNTLISGYARMGMLLEARELFDGMSERDNFSWTAMISGYVKHKQPAHALELY 632
            M E+DLCSWN LISGYA+MG+L EA+ LFD M ERDNFSWTAMISGYV+H +P  ALEL+
Sbjct: 131  MPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELF 190

Query: 633  RLMQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDSDAVVSSALLDVYGK 812
            R+M+R++N   NKFTV               GKEIHG I+RTGLDSD VV SAL D+YGK
Sbjct: 191  RMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGK 250

Query: 813  CGSLNEARYIFDRVQGKDIVLWTSMIDRYFGDGRWEDGLSLFSDFLRCGIRPNEYTFAGV 992
            CGS+ EAR+IFD++  +DIV WT+MIDRYF DGR ++G  LF+D LR GIRPNE+TF+GV
Sbjct: 251  CGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGV 310

Query: 993  LNACARQTAEELGREVHGHMVR 1058
            LNACA QT+EELG++VHG+M R
Sbjct: 311  LNACANQTSEELGKKVHGYMTR 332



 Score =  110 bits (276), Expect = 4e-22
 Identities = 58/183 (31%), Positives = 95/183 (51%)
 Frame = +3

Query: 459  EKDLCSWNTLISGYARMGMLLEARELFDGMSERDNFSWTAMISGYVKHKQPAHALELYRL 638
            + D   W+ L   Y + G + EAR +FD M +RD  +WTAMI  Y +  +     +L+  
Sbjct: 235  DSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFAD 294

Query: 639  MQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDSDAVVSSALLDVYGKCG 818
            + R+  +  N+FT                GK++HG + R G D  +  +SAL+ +Y KCG
Sbjct: 295  LLRS-GIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCG 353

Query: 819  SLNEARYIFDRVQGKDIVLWTSMIDRYFGDGRWEDGLSLFSDFLRCGIRPNEYTFAGVLN 998
            ++  A  +F      D+  WTS+I  Y  +G+ ++ +  F   ++ G +P+  TF GVL+
Sbjct: 354  NMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLS 413

Query: 999  ACA 1007
            ACA
Sbjct: 414  ACA 416



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 35/100 (35%), Positives = 60/100 (60%)
 Frame = +3

Query: 243 LLENQVCPPPVAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGS 422
           LL + + P    +S +L  C  + + + GK+VH ++ R GF   +F ++ ++ +Y KCG+
Sbjct: 295 LLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGN 354

Query: 423 MSNARKLFDEMGEKDLCSWNTLISGYARMGMLLEARELFD 542
           M +A ++F E  + DL SW +LI+GYA+ G   EA   F+
Sbjct: 355 MVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFE 394


>ref|XP_002522334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538412|gb|EEF40018.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  362 bits (928), Expect = 1e-97
 Identities = 188/345 (54%), Positives = 237/345 (68%), Gaps = 3/345 (0%)
 Frame = +3

Query: 33   MKRNQFI--LRKLLRSHSCLYSSTPHSIQPTISPKPFFLPSGDHG-PSANRDASFIESIQ 203
            MK +Q I  + K ++S    YSS   S  P      F L S D        +  F E+I 
Sbjct: 1    MKLSQSIPLMNKAIKSS---YSSQSQSYNPLSHRTIFKLSSKDSFIDRLCNEGRFKEAIA 57

Query: 204  HLCQQKRLKDVIPLLENQVCPPPVAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFI 383
             LC+Q RLK+ I +L     P P  YS ++Q C++ RAL+ GK+VHDHI  SGF  G  I
Sbjct: 58   LLCEQNRLKEAIQVLNQIDRPSPSIYSSLIQSCLKNRALEVGKKVHDHIKLSGFIPGLVI 117

Query: 384  SNKILELYCKCGSMSNARKLFDEMGEKDLCSWNTLISGYARMGMLLEARELFDGMSERDN 563
            SN++L++Y KC  + +A+KLF+EMGE+DLCSWN LISG A+MG+L EAR+LFD M ERDN
Sbjct: 118  SNRLLDMYAKCNDLVDAQKLFEEMGERDLCSWNVLISGCAKMGLLKEARKLFDTMPERDN 177

Query: 564  FSWTAMISGYVKHKQPAHALELYRLMQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHG 743
            FSWTAMISGYV+H +P  ALELYRLM++ ENL  NKFTV               GKEIHG
Sbjct: 178  FSWTAMISGYVRHNRPHEALELYRLMKKCENLTSNKFTVSSVLAAAAAIPCLRIGKEIHG 237

Query: 744  RIIRTGLDSDAVVSSALLDVYGKCGSLNEARYIFDRVQGKDIVLWTSMIDRYFGDGRWED 923
             I+RTGLDSD VV SAL D+YGKCGS+ EAR+IFD++  +D+V WT+MIDRYF DGR E+
Sbjct: 238  YIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVNRDVVTWTAMIDRYFEDGRREE 297

Query: 924  GLSLFSDFLRCGIRPNEYTFAGVLNACARQTAEELGREVHGHMVR 1058
            G  LF++ LR GI+PN++TFAGVLNACA    E +G++VHGHM R
Sbjct: 298  GFELFAELLRSGIKPNDFTFAGVLNACADLGVEGIGKQVHGHMTR 342



 Score =  114 bits (284), Expect = 5e-23
 Identities = 62/183 (33%), Positives = 93/183 (50%)
 Frame = +3

Query: 459  EKDLCSWNTLISGYARMGMLLEARELFDGMSERDNFSWTAMISGYVKHKQPAHALELYRL 638
            + D   W+ L   Y + G + EAR +FD M  RD  +WTAMI  Y +  +     EL+  
Sbjct: 245  DSDEVVWSALSDMYGKCGSIEEARHIFDKMVNRDVVTWTAMIDRYFEDGRREEGFELFAE 304

Query: 639  MQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDSDAVVSSALLDVYGKCG 818
            + R+  +  N FT                GK++HG + R   D  +  +SAL+ +Y KCG
Sbjct: 305  LLRS-GIKPNDFTFAGVLNACADLGVEGIGKQVHGHMTRADFDPFSFAASALVHMYSKCG 363

Query: 819  SLNEARYIFDRVQGKDIVLWTSMIDRYFGDGRWEDGLSLFSDFLRCGIRPNEYTFAGVLN 998
            ++  A  +F  +   D+V WTS+I  Y  +G  ++ L  F   L+ G RP+  TF GVL+
Sbjct: 364  NMVNAERVFRGMPQPDLVSWTSLIAGYAQNGHPDEALQYFELLLKSGTRPDHITFVGVLS 423

Query: 999  ACA 1007
            ACA
Sbjct: 424  ACA 426



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 35/100 (35%), Positives = 59/100 (59%)
 Frame = +3

Query: 243 LLENQVCPPPVAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGS 422
           LL + + P    ++ +L  C +      GK+VH H+ R+ F   +F ++ ++ +Y KCG+
Sbjct: 305 LLRSGIKPNDFTFAGVLNACADLGVEGIGKQVHGHMTRADFDPFSFAASALVHMYSKCGN 364

Query: 423 MSNARKLFDEMGEKDLCSWNTLISGYARMGMLLEARELFD 542
           M NA ++F  M + DL SW +LI+GYA+ G   EA + F+
Sbjct: 365 MVNAERVFRGMPQPDLVSWTSLIAGYAQNGHPDEALQYFE 404


>ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75097747|sp|O23169.1|PP353_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g37170 gi|2464864|emb|CAB16758.1| putative protein
            [Arabidopsis thaliana] gi|7270666|emb|CAB80383.1|
            putative protein [Arabidopsis thaliana]
            gi|332661361|gb|AEE86761.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  339 bits (869), Expect = 8e-91
 Identities = 179/359 (49%), Positives = 233/359 (64%), Gaps = 7/359 (1%)
 Frame = +3

Query: 3    HHSPVCTSTTMKRNQFILRKLLRSHSCLYSSTPHSIQPTISPKPFFLPSGDHGP------ 164
            +HS     TT+  + FIL++ L S         H+     S K FF P+ + G       
Sbjct: 2    NHSNARKLTTL--HGFILKRNLSSF--------HASLKRFSDKKFFNPNHEDGGVVVERL 51

Query: 165  -SANRDASFIESIQHLCQQKRLKDVIPLLENQVCPPPVAYSKILQLCIEKRALDEGKRVH 341
              ANR   F E+I  LC QK L++ + LL     PP   Y  ++Q+C + RAL+EGK+VH
Sbjct: 52   CRANR---FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVH 108

Query: 342  DHINRSGFKAGAFISNKILELYCKCGSMSNARKLFDEMGEKDLCSWNTLISGYARMGMLL 521
            +HI  SGF  G  I N++L +Y KCGS+ +ARK+FDEM  +DLCSWN +++GYA +G+L 
Sbjct: 109  EHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLE 168

Query: 522  EARELFDGMSERDNFSWTAMISGYVKHKQPAHALELYRLMQRNENLMCNKFTVXXXXXXX 701
            EAR+LFD M+E+D++SWTAM++GYVK  QP  AL LY LMQR  N   N FTV       
Sbjct: 169  EARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAA 228

Query: 702  XXXXXXXXGKEIHGRIIRTGLDSDAVVSSALLDVYGKCGSLNEARYIFDRVQGKDIVLWT 881
                    GKEIHG I+R GLDSD V+ S+L+D+YGKCG ++EAR IFD++  KD+V WT
Sbjct: 229  AAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWT 288

Query: 882  SMIDRYFGDGRWEDGLSLFSDFLRCGIRPNEYTFAGVLNACARQTAEELGREVHGHMVR 1058
            SMIDRYF   RW +G SLFS+ +    RPNEYTFAGVLNACA  T EELG++VHG+M R
Sbjct: 289  SMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR 347



 Score =  111 bits (277), Expect = 3e-22
 Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
 Frame = +3

Query: 312  RALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGSMSNARKLFDEMGEKDLCSWNTLI 491
            + +  GK +H HI R+G                                + D   W++L+
Sbjct: 232  KCIRRGKEIHGHIVRAGL-------------------------------DSDEVLWSSLM 260

Query: 492  SGYARMGMLLEARELFDGMSERDNFSWTAMISGYVKHKQPAHALELY-RLMQRNENLMCN 668
              Y + G + EAR +FD + E+D  SWT+MI  Y K  +      L+  L+   E    N
Sbjct: 261  DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERP--N 318

Query: 669  KFTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDSDAVVSSALLDVYGKCGSLNEARYIFD 848
            ++T                GK++HG + R G D  +  SS+L+D+Y KCG++  A+++ D
Sbjct: 319  EYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD 378

Query: 849  RVQGKDIVLWTSMIDRYFGDGRWEDGLSLFSDFLRCGIRPNEYTFAGVLNACARQTAEEL 1028
                 D+V WTS+I     +G+ ++ L  F   L+ G +P+  TF  VL+AC      E 
Sbjct: 379  GCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438

Query: 1029 GRE 1037
            G E
Sbjct: 439  GLE 441



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 49/227 (21%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
 Frame = +3

Query: 264 PPPVAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGSMSNARKL 443
           P    ++ +L  C +    + GK+VH ++ R GF   +F S+ ++++Y KCG++ +A+ +
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376

Query: 444 FDEMGEKDLCSWNTLISGYARMGMLLEARELFDGM----SERDNFSWTAMISGYVKHKQP 611
            D   + DL SW +LI G A+ G   EA + FD +    ++ D+ ++  ++S        
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436

Query: 612 AHALELYRLMQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDSDAVVSSA 791
              LE +  +     L     T                 +++   I    +     + ++
Sbjct: 437 EKGLEFFYSITEKHRL---SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493

Query: 792 LL---DVYGKCGSLNEARYIFDRVQGKDIVLWTSMIDRYFGDGRWED 923
           +L     YG      EA     +++ ++ V + +M + Y   G+WE+
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540


>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297314849|gb|EFH45272.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 693

 Score =  338 bits (866), Expect = 2e-90
 Identities = 176/345 (51%), Positives = 225/345 (65%), Gaps = 11/345 (3%)
 Frame = +3

Query: 57   RKLLRSHSCLYSS----TPHSIQPTISPKPFFLPSGDHGP-------SANRDASFIESIQ 203
            RKL   H  ++ S    + ++ Q   S K FF    + G         ANR   F E+I 
Sbjct: 8    RKLSTFHGLIFKSNLLSSSYASQKRFSDKKFFDSKLEDGGVVVERLCRANR---FGEAID 64

Query: 204  HLCQQKRLKDVIPLLENQVCPPPVAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFI 383
             LC QK L++ + LL     PP   Y  ++Q+C + RAL+EGK+VH+HI  SGF  G  I
Sbjct: 65   VLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 124

Query: 384  SNKILELYCKCGSMSNARKLFDEMGEKDLCSWNTLISGYARMGMLLEARELFDGMSERDN 563
             N+IL +Y KCGS+ +ARK+FDEM E+D+CSWN +++GYA +G+L EAR LFD M ERD+
Sbjct: 125  WNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDS 184

Query: 564  FSWTAMISGYVKHKQPAHALELYRLMQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHG 743
            +SWTAM++GYVK  QP  AL LY LMQR  N   N FTV               GKEIHG
Sbjct: 185  YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHG 244

Query: 744  RIIRTGLDSDAVVSSALLDVYGKCGSLNEARYIFDRVQGKDIVLWTSMIDRYFGDGRWED 923
             I+R GLDSD V+ S+L+D+YGKCG ++EAR IFD++  KD+V WTSMIDRYF   RW +
Sbjct: 245  HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWRE 304

Query: 924  GLSLFSDFLRCGIRPNEYTFAGVLNACARQTAEELGREVHGHMVR 1058
            G SLFS+ +    RPNEYTF+GVLNACA  T EELGR+VHG+M R
Sbjct: 305  GFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTR 349



 Score =  109 bits (272), Expect = 1e-21
 Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
 Frame = +3

Query: 312  RALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGSMSNARKLFDEMGEKDLCSWNTLI 491
            + +  GK +H HI R+G                                + D   W++L+
Sbjct: 234  KCIRRGKEIHGHIVRAGL-------------------------------DSDEVLWSSLM 262

Query: 492  SGYARMGMLLEARELFDGMSERDNFSWTAMISGYVKHKQPAHALELY-RLMQRNENLMCN 668
              Y + G + EAR +FD + ++D  SWT+MI  Y K  +      L+  L+   E    N
Sbjct: 263  DMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERP--N 320

Query: 669  KFTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDSDAVVSSALLDVYGKCGSLNEARYIFD 848
            ++T                G+++HG + R G D  +  SS+L+D+Y KCG++  AR++ D
Sbjct: 321  EYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVD 380

Query: 849  RVQGKDIVLWTSMIDRYFGDGRWEDGLSLFSDFLRCGIRPNEYTFAGVLNACARQTAEEL 1028
                 D+V  TS+I  Y  +G+ ++ L  F   L+ G +P+  TF  VL+AC      E 
Sbjct: 381  GCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 440

Query: 1029 GRE 1037
            G E
Sbjct: 441  GLE 443



 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 49/227 (21%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
 Frame = +3

Query: 264 PPPVAYSKILQLCIEKRALDEGKRVHDHINRSGFKAGAFISNKILELYCKCGSMSNARKL 443
           P    +S +L  C +    + G++VH ++ R GF   +F S+ ++++Y KCG++ +AR +
Sbjct: 319 PNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHV 378

Query: 444 FDEMGEKDLCSWNTLISGYARMGMLLEARELFDGM----SERDNFSWTAMISGYVKHKQP 611
            D   + DL S  +LI GYA+ G   EA + FD +    ++ D+ ++  ++S        
Sbjct: 379 VDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 438

Query: 612 AHALELYRLMQRNENLMCNKFTVXXXXXXXXXXXXXXXGKEIHGRIIRTGLDSDAVVSSA 791
              LE +  +    +L     T                 +++   +    +     + ++
Sbjct: 439 EKGLEFFYSITEKHDL---THTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWAS 495

Query: 792 LL---DVYGKCGSLNEARYIFDRVQGKDIVLWTSMIDRYFGDGRWED 923
           +L     YG      EA     +++ ++ V + +M + Y   G+WE+
Sbjct: 496 VLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 542