BLASTX nr result

ID: Salvia21_contig00026323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00026323
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH65889.1| OSIGBa0096I22.2 [Oryza sativa Indica Group]            74   9e-12
gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-...    71   8e-11
gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subc...    71   1e-10
gb|AAM74296.1|AC083944_14 Putative retroelement [Oryza sativa Ja...    70   2e-10
emb|CAE05319.2| OSJNBa0056L23.17 [Oryza sativa Japonica Group]         70   2e-10

>emb|CAH65889.1| OSIGBa0096I22.2 [Oryza sativa Indica Group]
          Length = 366

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = +3

Query: 90  EEPQDARGHNP-SPLPPTRRVEELFLRQNPPTFDGTSEPAEAEIWVRAMERIFNFLRCTD 266
           ++ Q+ +G+N  +PLPP  ++ + FLR  PPTF  T+ P EA  W+ A+E+    L+CTD
Sbjct: 36  QQMQNQQGNNNVNPLPPQNKLAD-FLRVKPPTFSSTTNPVEAGDWLHAVEKKLELLQCTD 94

Query: 267 EERLSCVSFQLTGSADFWWE 326
           +E++  VS QL GSA  WW+
Sbjct: 95  QEKVVFVSHQLQGSASEWWD 114


>gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550403|gb|ABA93200.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1640

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/79 (39%), Positives = 50/79 (63%)
 Frame = +3

Query: 90  EEPQDARGHNPSPLPPTRRVEELFLRQNPPTFDGTSEPAEAEIWVRAMERIFNFLRCTDE 269
           ++ Q+ +G+N + LPP +     FLR  P TF  T+ P EA IW+ A+E+  + ++CT++
Sbjct: 356 QQAQNQQGNNHNQLPPPQNKLADFLRVRPATFSSTTNPVEAGIWLHAVEKKLDLIQCTEQ 415

Query: 270 ERLSCVSFQLTGSADFWWE 326
           E++S  S QL G A  WW+
Sbjct: 416 EKVSFASHQLHGPAAEWWD 434


>gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1687

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
 Frame = +3

Query: 96  PQDARGHNPSPLP--PTRRVEEL--FLRQNPPTFDGTSEPAEAEIWVRAMERIFNFLRCT 263
           P    G+ P PLP  PT    +L  FLR  PPTF  T+ P EA  W+ A+E+  N L+C 
Sbjct: 282 PHSDSGNGPPPLPENPTLAQSKLPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCN 341

Query: 264 DEERLSCVSFQLTGSADFWWE 326
           D+E+++  + QL G A  WW+
Sbjct: 342 DQEKVAFATHQLQGPASAWWD 362


>gb|AAM74296.1|AC083944_14 Putative retroelement [Oryza sativa Japonica Group]
           gi|31430529|gb|AAP52431.1| retrotransposon protein,
           putative, unclassified, expressed [Oryza sativa Japonica
           Group]
          Length = 365

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = +3

Query: 90  EEPQDARGHNP-SPLPPTRRVEELFLRQNPPTFDGTSEPAEAEIWVRAMERIFNFLRCTD 266
           ++ Q+ +G+N  +P PP  ++ + FLR  PPTF  T+ P EA  W+ A+E+    L+CTD
Sbjct: 36  QQMQNQQGNNNVNPPPPQNKLAD-FLRVRPPTFSSTTNPVEAGDWLHAVEKKLELLQCTD 94

Query: 267 EERLSCVSFQLTGSADFWWE 326
           +E++   S QL GSA  WW+
Sbjct: 95  QEKVVFASHQLQGSASEWWD 114


>emb|CAE05319.2| OSJNBa0056L23.17 [Oryza sativa Japonica Group]
          Length = 963

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/76 (40%), Positives = 46/76 (60%)
 Frame = +3

Query: 99  QDARGHNPSPLPPTRRVEELFLRQNPPTFDGTSEPAEAEIWVRAMERIFNFLRCTDEERL 278
           Q A   N +P PP +     FLR +PPTF  T+ P EA  W+ A+E+  + ++CT++E++
Sbjct: 210 QQANNQNQNPPPPPQNKLADFLRVSPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKV 269

Query: 279 SCVSFQLTGSADFWWE 326
           S  S QL G A  WW+
Sbjct: 270 SFASHQLHGPAAEWWD 285


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