BLASTX nr result

ID: Salvia21_contig00026051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00026051
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608363.1| PSII 32 kDa protein [Vitis vinifera] gi|2099...   100   3e-19
ref|YP_173397.1| hypothetical protein NitaMp051 [Nicotiana tabac...    99   7e-19
emb|CBJ20753.1| hypothetical protein [Beta vulgaris subsp. marit...    87   2e-15
ref|YP_004222329.1| hypothetical protein BevumaM_p095 [Beta vulg...    87   2e-15
gb|AAD27608.1|AF121903_1 unknown [Nicotiana tabacum]                   71   1e-10

>ref|YP_002608363.1| PSII 32 kDa protein [Vitis vinifera] gi|209954160|emb|CAQ77603.1|
           PSII 32 kDa protein [Vitis vinifera]
           gi|239764766|gb|ACS15235.1| PSII 32 kDa protein [Vitis
           vinifera]
          Length = 615

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 5/119 (4%)
 Frame = +2

Query: 2   EPLMDDRTRLRELQARLASSIGGGD---NLPVFLNILFKQVTLEKKIEAALVDDGYPRER 172
           +PLM D  R  EL+ RL     G +   +L  F  IL K V LEKKIEAALV DGY R  
Sbjct: 496 QPLMPDDVRFGELRDRLTIYFLGRNELRHLAQFAGILQKAVLLEKKIEAALVFDGYDRNV 555

Query: 173 VLEKRHAIRGFLFY--PRGTALTERTLTQHLEQIERNGTRASVPYRRIGRAVENHDLLL 343
           +L +RH IRGFLF    R   L+ERTL ++L +I+ NGTR SVPY R+ RA+ N  ++L
Sbjct: 556 ILLQRHHIRGFLFLHPTRALVLSERTLDRYLNEIQINGTRQSVPYTRVVRAIRNQHIIL 614


>ref|YP_173397.1| hypothetical protein NitaMp051 [Nicotiana tabacum]
           gi|56806560|dbj|BAD83461.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 315

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 63/123 (51%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
 Frame = +2

Query: 2   EPLMDDRTRLRELQARLASSIGGGD---NLPVFLNILFKQVTLEKKIEAALVDDGYPRER 172
           +PL+ D  R  ELQ RL+    G +   +LP FL IL KQ+ LEKKIEAALV DG+P   
Sbjct: 185 QPLLPDIQRRVELQQRLSLYFIGRNEARHLPPFLGILEKQMLLEKKIEAALVRDGFPPHI 244

Query: 173 VLEKRHAIRGFLF-YP-RGTALTERTLTQHLEQIERNGTRASVPYRRIGRAVENHDLLLF 346
           VL  R  IRG LF +P R  AL+E TL ++L QIER+GTR S PY R+ RA+ N ++L  
Sbjct: 245 VLAWRSEIRGLLFNHPTREAALSENTLNRYLSQIERDGTRQSQPYLRLVRAIRNAEILYG 304

Query: 347 YRR 355
            R+
Sbjct: 305 TRK 307


>emb|CBJ20753.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 227

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/115 (38%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
 Frame = +2

Query: 8   LMDDRTRLRELQARLAS-SIGGGDNLPVFLNILFKQVTLEKKIEAALVDDGYPRERVLEK 184
           L+ D  R  +L  RLA  S     +L   ++++++Q  +EKKIEA+L+ DG        +
Sbjct: 107 LIHDELRRAQLYNRLAPHSFVNQFSLSTIVDLVYQQAEIEKKIEASLILDGISPTLFFSE 166

Query: 185 RHAIRGFLFYPRGTALTERTLTQHLEQIERNGTRASVPYRRIGRAVENHDLLLFY 349
            + +RGFLFYP G  ++  TL +++ +I +NGTR S+PYRR+ RA+ N++L   Y
Sbjct: 167 LNRLRGFLFYPHGAPISAATLARYIREIAQNGTRQSIPYRRVYRAIRNYELFWSY 221


>ref|YP_004222329.1| hypothetical protein BevumaM_p095 [Beta vulgaris subsp. maritima]
           gi|346683203|ref|YP_004842135.1| hypothetical protein
           BemaM_p091 [Beta macrocarpa]
           gi|317905665|emb|CBX33231.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439844|emb|CBX33304.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500121|emb|CBX24940.1| hypothetical protein [Beta
           macrocarpa] gi|384939133|emb|CBL51979.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 227

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/115 (38%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
 Frame = +2

Query: 8   LMDDRTRLRELQARLAS-SIGGGDNLPVFLNILFKQVTLEKKIEAALVDDGYPRERVLEK 184
           L+ D  R  +L  RLA  S     +L   ++++++Q  +EKKIEA+L+ DG        +
Sbjct: 107 LIHDELRRAQLYNRLAPHSFVNQFSLSTIVDLVYQQAEIEKKIEASLILDGISPTLFFSE 166

Query: 185 RHAIRGFLFYPRGTALTERTLTQHLEQIERNGTRASVPYRRIGRAVENHDLLLFY 349
            + +RGFLFYP G  ++  TL +++ +I +NGTR S+PYRR+ RA+ N++L   Y
Sbjct: 167 LNRLRGFLFYPHGAPISAATLARYIREIAQNGTRQSIPYRRVYRAIRNYELFWSY 221


>gb|AAD27608.1|AF121903_1 unknown [Nicotiana tabacum]
          Length = 274

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 47/117 (40%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
 Frame = +2

Query: 5   PLMDDRTRLRELQARLASSIGGGDNLPVFLN--ILFKQVTLEKKIEAALVDDGYPRERVL 178
           PL +D  R REL  RL+ +      LP  ++  I+  Q+  E KIE AL  D      +L
Sbjct: 150 PLQEDGQRRRELSDRLSINTVKRP-LPEDISEAIIETQLQTELKIEEALRSDRVQEGSIL 208

Query: 179 EKRHAIRGFLFYPRGTALTERTLTQHLEQIERNGTRASVPYRRIGRAVENHDLLLFY 349
           EKRH IRG LFYP G A +  T   HL+QIE  GT  S+ Y+R+   +    L L +
Sbjct: 209 EKRHQIRGVLFYPFGRAFSLDTYLDHLKQIENQGTHRSLLYKRLMNEISQEKLELVF 265


Top