BLASTX nr result

ID: Salvia21_contig00025957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00025957
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi...   194   5e-48
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]   194   5e-48
ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
ref|XP_002520126.1| pentatricopeptide repeat-containing protein,...   186   1e-45
ref|XP_002876827.1| pentatricopeptide repeat-containing protein ...   182   3e-44

>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
           protein product [Vitis vinifera]
          Length = 617

 Score =  194 bits (494), Expect = 5e-48
 Identities = 99/161 (61%), Positives = 117/161 (72%)
 Frame = +1

Query: 1   WQCAYSVFSDMGGNRNLVTWNSMIAGMMLNGRCEHAVDLFSKLESEGGLKADSATWNSMI 180
           W  AY +F ++ G+RNLVTWNSMIAGMMLNG+ + AV+LF +LE EG L+ DSATWN+MI
Sbjct: 284 WHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEG-LEPDSATWNTMI 342

Query: 181 SGFTQLGKADVAFVLFRKMLSCGVIPSVRCITSLLAACSCLSMQSYGKEIHAFAARRKIV 360
           SGF+Q G+   AF  F KM S GVI S++ ITSLL ACS LS    GKEIH    R  I 
Sbjct: 343 SGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNID 402

Query: 361 DDAFLATAVIDMYMKCGQPALACNVFNQFHIKPNDPAFWNA 483
            D F++TA+IDMYMKCG   LA  VF QF IKP+DPAFWNA
Sbjct: 403 TDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNA 443



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 145 LKADSATWNSMISGFTQLGKADVAFVLFRKML-SCGVIPSVRCITSLLAACSCLSMQSYG 321
           L  +  ++N+ ISG  Q G   + F +F+ +L S G +P+   + S+L+ACS L    +G
Sbjct: 193 LDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFG 252

Query: 322 KEIHAFAARRKIVDDAFLATAVIDMYMKCG 411
           ++IH    + +I  D  + TA++DMY KCG
Sbjct: 253 RQIHGLVVKIEINFDTMVGTALVDMYSKCG 282


>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
          Length = 677

 Score =  194 bits (494), Expect = 5e-48
 Identities = 99/161 (61%), Positives = 117/161 (72%)
 Frame = +1

Query: 1   WQCAYSVFSDMGGNRNLVTWNSMIAGMMLNGRCEHAVDLFSKLESEGGLKADSATWNSMI 180
           W  AY +F ++ G+RNLVTWNSMIAGMMLNG+ + AV+LF +LE EG L+ DSATWN+MI
Sbjct: 344 WHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEG-LEPDSATWNTMI 402

Query: 181 SGFTQLGKADVAFVLFRKMLSCGVIPSVRCITSLLAACSCLSMQSYGKEIHAFAARRKIV 360
           SGF+Q G+   AF  F KM S GVI S++ ITSLL ACS LS    GKEIH    R  I 
Sbjct: 403 SGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNID 462

Query: 361 DDAFLATAVIDMYMKCGQPALACNVFNQFHIKPNDPAFWNA 483
            D F++TA+IDMYMKCG   LA  VF QF IKP+DPAFWNA
Sbjct: 463 TDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNA 503



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 145 LKADSATWNSMISGFTQLGKADVAFVLFRKML-SCGVIPSVRCITSLLAACSCLSMQSYG 321
           L  +  ++N+ ISG  Q G   + F +F+ +L S G +P+   + S+L+ACS L    +G
Sbjct: 253 LDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFG 312

Query: 322 KEIHAFAARRKIVDDAFLATAVIDMYMKCG 411
           ++IH    + +I  D  + TA++DMY KCG
Sbjct: 313 RQIHGLVVKIEINFDTMVGTALVDMYSKCG 342


>ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Glycine max]
          Length = 627

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/162 (59%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1   WQCAYSVFSDMGGNR-NLVTWNSMIAGMMLNGRCEHAVDLFSKLESEGGLKADSATWNSM 177
           W+ A+ VF+ + GNR NL+TWNSMIAGMMLN   E AVD+F +LESEG LK DSATWNSM
Sbjct: 293 WRSAFEVFTGVEGNRRNLITWNSMIAGMMLNKESERAVDMFQRLESEG-LKPDSATWNSM 351

Query: 178 ISGFTQLGKADVAFVLFRKMLSCGVIPSVRCITSLLAACSCLSMQSYGKEIHAFAARRKI 357
           ISGF QLG+   AF  F +M S GV P ++ +TSLL+AC+  SM  +GKEIH  + R  I
Sbjct: 352 ISGFAQLGECGEAFKYFGQMQSVGVAPCLKIVTSLLSACADSSMLQHGKEIHGLSLRTDI 411

Query: 358 VDDAFLATAVIDMYMKCGQPALACNVFNQFHIKPNDPAFWNA 483
             D FL TA++DMYMKCG  + A  VF+Q+  KP+DPAFWNA
Sbjct: 412 NRDDFLVTALVDMYMKCGLASWARGVFDQYDAKPDDPAFWNA 453


>ref|XP_002520126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540618|gb|EEF42181.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 593

 Score =  186 bits (473), Expect = 1e-45
 Identities = 91/161 (56%), Positives = 116/161 (72%)
 Frame = +1

Query: 1   WQCAYSVFSDMGGNRNLVTWNSMIAGMMLNGRCEHAVDLFSKLESEGGLKADSATWNSMI 180
           W+ AY+VF++M  N+NL+TWNSMIAGMMLN + ++A++LF  LES+G L+ DSATWNSMI
Sbjct: 387 WKWAYNVFNEMNDNKNLITWNSMIAGMMLNAQSQNAIELFELLESQG-LEPDSATWNSMI 445

Query: 181 SGFTQLGKADVAFVLFRKMLSCGVIPSVRCITSLLAACSCLSMQSYGKEIHAFAARRKIV 360
           SGF QL K   AF  F+KM   G++PS++ +TSLLAAC+ L+    GKEIH    R  + 
Sbjct: 446 SGFEQLDKGVEAFKFFKKMQLSGMVPSLKSVTSLLAACASLTALQCGKEIHGHVVRTNMN 505

Query: 361 DDAFLATAVIDMYMKCGQPALACNVFNQFHIKPNDPAFWNA 483
            D F+AT +IDMYMKCG       VF+QF IKP DPA WNA
Sbjct: 506 FDEFMATGLIDMYMKCGFSLWGQRVFDQFEIKPKDPAIWNA 546



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +1

Query: 163 TWNSMISGFTQLGKADVAFVLFRKMLSCGVI-PSVRCITSLLAACSCLSMQSYGKEIHAF 339
           ++N+ +SG    G  +V   +F+ M     + P+   + S++AACS L    +G ++H F
Sbjct: 302 SYNAFVSGLLHNGVTNVVLKVFKDMREYSTLKPNSLTLVSVIAACSTLLYIQFGMQVHVF 361

Query: 340 AARRKIVDDAFLATAVIDMYMKCGQPALACNVFNQFHIKPN 462
             + ++  D  + T+++DMY KCG    A NVFN+ +   N
Sbjct: 362 LKKTQMGCDTMVGTSLVDMYSKCGYWKWAYNVFNEMNDNKN 402



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/137 (27%), Positives = 69/137 (50%)
 Frame = +1

Query: 34  GGNRNLVTWNSMIAGMMLNGRCEHAVDLFSKLESEGGLKADSATWNSMISGFTQLGKADV 213
           G N N+ T  ++ +  M       A+ +F ++        + A++N+ ISGF+Q G    
Sbjct: 166 GFNLNIYTATALTSMYMQLALLPDAMKVFDEMPDR-----NQASFNATISGFSQKGCCME 220

Query: 214 AFVLFRKMLSCGVIPSVRCITSLLAACSCLSMQSYGKEIHAFAARRKIVDDAFLATAVID 393
           A ++F++M  CG  P+   I S+L AC  + +     ++H  A +  +  D ++AT+++ 
Sbjct: 221 ALIVFKEMAFCGFRPNSVTIASVLPACDSVDL---SVQMHCCAIKLGVEMDVYVATSLVT 277

Query: 394 MYMKCGQPALACNVFNQ 444
            Y  CG   LA  VF +
Sbjct: 278 TYSGCGHLTLATKVFGE 294


>ref|XP_002876827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322665|gb|EFH53086.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 611

 Score =  182 bits (461), Expect = 3e-44
 Identities = 88/160 (55%), Positives = 117/160 (73%)
 Frame = +1

Query: 1   WQCAYSVFSDMGGNRNLVTWNSMIAGMMLNGRCEHAVDLFSKLESEGGLKADSATWNSMI 180
           W+ AYSVF+++   RNL++WNS+I+GMMLNG+ E AV+LF +L+SEG LK DSATWNS+I
Sbjct: 280 WKSAYSVFTELKDTRNLISWNSVISGMMLNGQHETAVELFEQLDSEG-LKPDSATWNSLI 338

Query: 181 SGFTQLGKADVAFVLFRKMLSCGVIPSVRCITSLLAACSCLSMQSYGKEIHAFAARRKIV 360
           SGF+QLGK   AF  F +MLS  ++PS++C+TSLL+ACS +     GKEIH    +    
Sbjct: 339 SGFSQLGKVVEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE 398

Query: 361 DDAFLATAVIDMYMKCGQPALACNVFNQFHIKPNDPAFWN 480
            D F+ T++IDMYMKCG   LA  +F++F  KP DP FWN
Sbjct: 399 RDIFVLTSLIDMYMKCGFSLLARRIFDRFEPKPKDPVFWN 438


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