BLASTX nr result

ID: Salvia21_contig00024172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00024172
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002513900.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vit...    90   2e-16
ref|NP_173641.1| F-box protein [Arabidopsis thaliana] gi|7526400...    89   3e-16
ref|XP_002887721.1| F-box family protein [Arabidopsis lyrata sub...    86   4e-15

>ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|222856836|gb|EEE94383.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 54/108 (50%), Positives = 65/108 (60%), Gaps = 16/108 (14%)
 Frame = +3

Query: 3   LRRFHAIKTLKIDLPAGDLHPANGTSIKWVARFGHTLRSCVILA---------------- 134
           L +F  I+ L+I+LPAGDL    G  IKW A FG +L+SCVIL                 
Sbjct: 101 LSQFDRIRDLQIELPAGDLKLEKGAVIKWRAEFGKSLKSCVILGFRRVANPEGNSADEEI 160

Query: 135 SGTAGMKTRVVWTISALIAASARHHMAADVVDEQRLLSHLVVSDREGE 278
             T G+KTRVVW ISALIAASARH++  DVV   R +  LV+ DREGE
Sbjct: 161 DFTGGLKTRVVWAISALIAASARHYLLNDVVKGHREMERLVLVDREGE 208


>ref|XP_002513900.1| conserved hypothetical protein [Ricinus communis]
           gi|223546986|gb|EEF48483.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
 Frame = +3

Query: 3   LRRFHAIKTLKIDLPAGDLHPANGTSIKWVARFGHTLRSCVILASGTAG-----MKTRVV 167
           L RF  I+ L+I+LPAGDL    G  IKW A +G TL+SCVI+   T       +K RVV
Sbjct: 100 LSRFERIRDLEIELPAGDLKLEKGVVIKWRAEYGKTLKSCVIMGFRTRNSDDFDLKARVV 159

Query: 168 WTISALIAASARHHMAADVVDEQRLLSHLVVSDREGE 278
           WTISALIAASARH++  DVV E   +  LV+ D++ E
Sbjct: 160 WTISALIAASARHYLLKDVVREHEEMERLVLKDKDEE 196


>ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vitis vinifera]
          Length = 320

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 14/106 (13%)
 Frame = +3

Query: 3   LRRFHAIKTLKIDLPAGDLHPANGTSIKWVARFGHTLRSCVILA--------------SG 140
           LR F  I+ L+I+LP GDL    G  +KW A FG  L+SCVI+                 
Sbjct: 101 LRGFDRIRNLEIELPGGDLCLEKGAVLKWKAEFGKRLKSCVIMGYRGLGEGEELDFGGDM 160

Query: 141 TAGMKTRVVWTISALIAASARHHMAADVVDEQRLLSHLVVSDREGE 278
             G+K RVVWTISALIAASARH++  +++ E R L  LV+ DR+GE
Sbjct: 161 DGGLKVRVVWTISALIAASARHYLLRELIREHRELERLVLRDRDGE 206


>ref|NP_173641.1| F-box protein [Arabidopsis thaliana]
           gi|75264008|sp|Q9LM18.1|FB303_ARATH RecName: Full=F-box
           protein At1g22220 gi|9454528|gb|AAF87851.1|AC073942_5
           Contains similarity to an unknown protein T11I11.4
           gi|6587858 from Arabidopsis thaliana BAC T11I11
           gb|AC012680. EST gb|AA395079 comes from this gene
           [Arabidopsis thaliana] gi|46931332|gb|AAT06470.1|
           At1g22220 [Arabidopsis thaliana]
           gi|51970616|dbj|BAD44000.1| unknown protein [Arabidopsis
           thaliana] gi|332192092|gb|AEE30213.1| F-box protein
           [Arabidopsis thaliana]
          Length = 314

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 19/111 (17%)
 Frame = +3

Query: 3   LRRFHAIKTLKIDLPAGDLHPANGTSIKWVARFGHTLRSCVILASGTAG----------- 149
           L RF  I+ L ++LP GD+    G ++KW A FG TL+SCVI+A  +AG           
Sbjct: 95  LSRFDRIRNLDVELPGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSAGTVSSPVAVEGE 154

Query: 150 --------MKTRVVWTISALIAASARHHMAADVVDEQRLLSHLVVSDREGE 278
                   +KTRVVWTISAL+AAS+RH++  +VV E   +  LV+ D+E E
Sbjct: 155 SDAEFVTGLKTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKERE 205


>ref|XP_002887721.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333562|gb|EFH63980.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 333

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 26/118 (22%)
 Frame = +3

Query: 3   LRRFHAIKTLKIDLPAGDLHPANGTSIKWVARFGHTLRSCVILASGTA------------ 146
           L  F  I+ L+++L  GD+    G ++KW A FG TL+SCVI+A  +A            
Sbjct: 105 LAGFERIRNLEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATESTA 164

Query: 147 --------------GMKTRVVWTISALIAASARHHMAADVVDEQRLLSHLVVSDREGE 278
                         G+KTRVVWTISAL+AAS RH++  D+V + + +  L+V DREGE
Sbjct: 165 VVDGGVESDSEFVCGLKTRVVWTISALMAASTRHYLMRDLVKDHKDMEKLIVRDREGE 222


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