BLASTX nr result

ID: Salvia21_contig00023319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00023319
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB03152.1| unnamed protein product [Arabidopsis thaliana]        108   1e-21
ref|NP_181155.1| polynucleotidyl transferase, ribonuclease H-lik...   103   2e-20
gb|AAM76756.1| hypothetical protein [Arabidopsis thaliana]            103   2e-20
gb|AAM66064.1| unknown [Arabidopsis thaliana]                         101   2e-19
ref|NP_566424.1| DEDDy 3'-5' exonuclease domain-containing prote...   101   2e-19

>dbj|BAB03152.1| unnamed protein product [Arabidopsis thaliana]
          Length = 210

 Score =  108 bits (269), Expect = 1e-21
 Identities = 67/187 (35%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
 Frame = -3

Query: 639 PKTHTPIPLEMEANYTVLCGSYGVRTTVTAKASVVRRWVYNXXXXXXXXXXXXXLVVGLG 460
           P+  T      +  Y+V      +  TVT   SV+ +W+++              VVG+G
Sbjct: 3   PRIRTIGSYATQEKYSVNFFGEELTVTVTPDPSVIGQWIHDVLSNNRFSSHPL--VVGVG 60

Query: 459 VQWVP-GHDFSA-TLQLCVGTNCLIFQLDRARHCPAILRRFLVHPDVILVGLWNRMDAGM 286
           VQW P G+D  A TLQLCVG  C+I QL      P +L  FL +PD   VG+WN  DA  
Sbjct: 61  VQWTPPGYDPPADTLQLCVGNRCIIIQLSHCDRVPRVLHNFLAYPDYTFVGVWNSQDARK 120

Query: 285 LIRSRHAVKVGRLVDVRNVAYDFMG--CHLGASTGQLAEDILGMHGMYKDELVGRSDWNA 112
           L RSRH +++  L+D+R    D  G     G S   + E+ LG  G+  D  +  SDW+A
Sbjct: 121 LERSRHQLEIDDLLDLRKYVEDSSGRRSMRGCSFEVIVEECLGYRGVRLDREISMSDWSA 180

Query: 111 ETLNGEQ 91
             L  +Q
Sbjct: 181 YELCDDQ 187


>ref|NP_181155.1| polynucleotidyl transferase, ribonuclease H-like protein
           [Arabidopsis thaliana] gi|4678223|gb|AAD26968.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|50058835|gb|AAT69162.1| hypothetical protein
           At2g36110 [Arabidopsis thaliana]
           gi|330254113|gb|AEC09207.1| polynucleotidyl transferase,
           ribonuclease H-like protein [Arabidopsis thaliana]
          Length = 239

 Score =  103 bits (258), Expect = 2e-20
 Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
 Frame = -3

Query: 561 TVTAKASVVRRWVYNXXXXXXXXXXXXXLVVGLGVQWVPGHDFSAT--LQLCVGTNCLIF 388
           TVT   S +RRW+++              VVGL VQW PG        LQLCVG  CLI 
Sbjct: 29  TVTHTTSTIRRWIHSIRFFSRLRSSHPL-VVGLDVQWTPGGSDPPPDILQLCVGNRCLII 87

Query: 387 QLDRARHCPAILRRFLVHPDVILVGLWNRMDAGMLIRSRHAVKVGRLVDVRNVAYDFMGC 208
           QL   +  P +LR FL    +  VG+WN  D G L R RH +++ RL+D+R+     +  
Sbjct: 88  QLSHCKRIPEVLRSFLEDETITFVGVWNSQDQGKLERFRHQLEIWRLLDIRHYLPTRL-- 145

Query: 207 HLGASTGQLAEDILGMHGMYKDELVGRSDWNAETLNGEQ 91
            L +S  ++ E+ LG  G+ KD+ +  S+W A +L+ +Q
Sbjct: 146 -LNSSFEKIVEECLGYKGVRKDKEICMSNWGARSLSHDQ 183


>gb|AAM76756.1| hypothetical protein [Arabidopsis thaliana]
          Length = 239

 Score =  103 bits (258), Expect = 2e-20
 Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
 Frame = -3

Query: 561 TVTAKASVVRRWVYNXXXXXXXXXXXXXLVVGLGVQWVPGHDFSAT--LQLCVGTNCLIF 388
           TVT   S +RRW+++              VVGL VQW PG        LQLCVG  CLI 
Sbjct: 29  TVTHTTSTIRRWIHSIRFFSRLRSSHPL-VVGLDVQWTPGGSDPPPDILQLCVGNRCLII 87

Query: 387 QLDRARHCPAILRRFLVHPDVILVGLWNRMDAGMLIRSRHAVKVGRLVDVRNVAYDFMGC 208
           QL   +  P +LR FL    +  VG+WN  D G L R RH +++ RL+D+R+     +  
Sbjct: 88  QLSHCKRIPEVLRSFLEDETITFVGVWNSQDQGKLERFRHQLEIWRLLDIRHYLPTRL-- 145

Query: 207 HLGASTGQLAEDILGMHGMYKDELVGRSDWNAETLNGEQ 91
            L +S  ++ E+ LG  G+ KD+ +  S+W A +L+ +Q
Sbjct: 146 -LNSSFEKIVEECLGYKGVRKDKEICXSNWGARSLSHDQ 183


>gb|AAM66064.1| unknown [Arabidopsis thaliana]
          Length = 220

 Score =  101 bits (251), Expect = 2e-19
 Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
 Frame = -3

Query: 561 TVTAKASVVRRWVYNXXXXXXXXXXXXXLVVGLGVQWVPGHDFS----ATLQLCVGTNCL 394
           TVT  ASV+RRW+ +              VVG+GVQW P          TLQLCVG+ CL
Sbjct: 29  TVTPTASVIRRWIRSVRSYNRNHSVHPL-VVGIGVQWRPDSSDPDPPPKTLQLCVGSRCL 87

Query: 393 IFQLDRARHCPAILRRFLVHPDVILVGLWNRMDAGMLIRSRHAVKVGRLVDVRNVAYDFM 214
           I QL      P +LR FL  P    VG+WN  D   L + RH V++G+L+D+R    D  
Sbjct: 88  IIQLGYNYGLPKVLRTFLADPKTTFVGVWNGQDQKKLEKCRHRVEIGKLLDIRMFVRDSR 147

Query: 213 GCHL-GASTGQLAEDILGMHGMYKDELVGRSDWNAETLNGEQ 91
           G  +   S  Q+ ++ LG  G+  D  +  SDW    LN  Q
Sbjct: 148 GARMCFCSFEQIVKERLGRVGVRLDPAICMSDWGVYNLNHYQ 189


>ref|NP_566424.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
           thaliana] gi|12321979|gb|AAG51036.1|AC069474_35
           hypothetical protein; 71009-71671 [Arabidopsis thaliana]
           gi|15795166|dbj|BAB03154.1| unnamed protein product
           [Arabidopsis thaliana] gi|105829960|gb|ABF74709.1|
           At3g12470 [Arabidopsis thaliana]
           gi|332641678|gb|AEE75199.1| DEDDy 3'-5' exonuclease
           domain-containing protein [Arabidopsis thaliana]
          Length = 220

 Score =  101 bits (251), Expect = 2e-19
 Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
 Frame = -3

Query: 561 TVTAKASVVRRWVYNXXXXXXXXXXXXXLVVGLGVQWVPGHDFS----ATLQLCVGTNCL 394
           TVT  ASV+RRW+ +              VVG+GVQW P          TLQLCVG+ CL
Sbjct: 29  TVTPTASVIRRWIRSVRSYNRNHSVHPL-VVGIGVQWRPDSSDPDPPPKTLQLCVGSRCL 87

Query: 393 IFQLDRARHCPAILRRFLVHPDVILVGLWNRMDAGMLIRSRHAVKVGRLVDVRNVAYDFM 214
           I QL      P +LR FL  P    VG+WN  D   L + RH V++G+L+D+R    D  
Sbjct: 88  IIQLGYNYGLPKVLRTFLADPKTTFVGVWNGQDQKKLEKCRHRVEIGKLLDIRMFVRDSR 147

Query: 213 GCHL-GASTGQLAEDILGMHGMYKDELVGRSDWNAETLNGEQ 91
           G  +   S  Q+ ++ LG  G+  D  +  SDW    LN  Q
Sbjct: 148 GARMCFCSFEQIVKERLGRVGVRLDPAICMSDWGVYNLNHYQ 189


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