BLASTX nr result

ID: Salvia21_contig00019419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00019419
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ82703.1| potyviral capsid protein interacting protein 2b [...   428   e-117
gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [...   427   e-117
gb|AAQ82701.1| potyviral capsid protein interacting protein 1 [N...   422   e-115
ref|XP_002520159.1| Curved DNA-binding protein, putative [Ricinu...   415   e-113
ref|XP_002311874.1| predicted protein [Populus trichocarpa] gi|2...   408   e-111

>gb|AAQ82703.1| potyviral capsid protein interacting protein 2b [Nicotiana tabacum]
          Length = 305

 Score =  428 bits (1100), Expect = e-117
 Identities = 216/307 (70%), Positives = 250/307 (81%)
 Frame = -2

Query: 1159 MGVDYYNILKVSRNAAEEDLKKSYKKLAMKWHPDKNAVNTKEAEAKFKQISEAYDVLSDP 980
            MG+DYY++LKVSRNA+EEDLK+SYK+LAMKWHPDKN+ N KEAEAKFKQISEAYDVLSDP
Sbjct: 1    MGLDYYDVLKVSRNASEEDLKRSYKRLAMKWHPDKNSQNKKEAEAKFKQISEAYDVLSDP 60

Query: 979  QKRQIYDVYGEEGLKXXXXXXXXXXSKERDAGGGRRFKFSPRDPEVIFEEFFWGSDVGQG 800
            QKRQIYDVYG++ LK          S       GR F+F+ RD E IF EFF GSD    
Sbjct: 61   QKRQIYDVYGDDALKSGQFASASPTSA---GSNGRGFRFNTRDAEAIFAEFFGGSDSNSA 117

Query: 799  KSGGRLKKAASMETKLSCSLEELYKGSRRKMQIARVVLDESGKAVTVEEVLAINIKPGWK 620
               GR  KAA +E KL CSLEELYKGSRRKM+I+R++LD+SGK  TVEEVLAI+IKPGWK
Sbjct: 118  AGVGR--KAAPVENKLPCSLEELYKGSRRKMKISRILLDDSGKPTTVEEVLAIHIKPGWK 175

Query: 619  KGTKITFPEKGNHEAGATPGDLIFVIDEKPHPIFKRDGNDLLINHSISLLDALTCKTLNI 440
            KGTKITFPEKGN+E GATPGDLIFVIDEKPH +FKRDGNDL+IN  ISLLDALT KT+++
Sbjct: 176  KGTKITFPEKGNYEPGATPGDLIFVIDEKPHAVFKRDGNDLVINQKISLLDALTGKTISL 235

Query: 439  TTLDGRDLPLKVSGVIKPGQEMVIQNEGMPISKEPSKNGKLRIKFDIKFPSRLTAEQKSD 260
             TLDGR+L + ++ V+KPG E +I NEGMPISKE  K G L+IKFDIKFPSRL+A+QKSD
Sbjct: 236  ITLDGRELTIPITDVVKPGHEHIIPNEGMPISKERGKKGNLKIKFDIKFPSRLSADQKSD 295

Query: 259  LRRVLGR 239
            +RRVL R
Sbjct: 296  IRRVLCR 302


>gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [Nicotiana tabacum]
          Length = 305

 Score =  427 bits (1097), Expect = e-117
 Identities = 216/308 (70%), Positives = 251/308 (81%)
 Frame = -2

Query: 1159 MGVDYYNILKVSRNAAEEDLKKSYKKLAMKWHPDKNAVNTKEAEAKFKQISEAYDVLSDP 980
            MG+DYYN+LKVSRNA+EEDLK+SYK+LAMKWHPDKN+ N KEAEAKFKQISEAYDVLSDP
Sbjct: 1    MGLDYYNVLKVSRNASEEDLKRSYKRLAMKWHPDKNSQNKKEAEAKFKQISEAYDVLSDP 60

Query: 979  QKRQIYDVYGEEGLKXXXXXXXXXXSKERDAGGGRRFKFSPRDPEVIFEEFFWGSDVGQG 800
            QKRQIYDVYG++ LK          S   +A G   F+F+ RD E IF EFF GS    G
Sbjct: 61   QKRQIYDVYGDDALKSGQFASASPTSAGSNARG---FRFNTRDAEAIFAEFFGGSGSNSG 117

Query: 799  KSGGRLKKAASMETKLSCSLEELYKGSRRKMQIARVVLDESGKAVTVEEVLAINIKPGWK 620
               GR  KAA +E KL CSLEELYKGSRRKM+I+R++LD+SGK  TVEEVLAI+IKPGWK
Sbjct: 118  AGVGR--KAAPVENKLPCSLEELYKGSRRKMKISRILLDDSGKPTTVEEVLAIHIKPGWK 175

Query: 619  KGTKITFPEKGNHEAGATPGDLIFVIDEKPHPIFKRDGNDLLINHSISLLDALTCKTLNI 440
            KGTKITFPEKGN+E GATPGDLIFVIDEKPH +FKRDGNDL IN  ISLLDALT KT+++
Sbjct: 176  KGTKITFPEKGNYEPGATPGDLIFVIDEKPHAVFKRDGNDLEINQKISLLDALTGKTISL 235

Query: 439  TTLDGRDLPLKVSGVIKPGQEMVIQNEGMPISKEPSKNGKLRIKFDIKFPSRLTAEQKSD 260
             TLDGR+L + ++ ++KPG E +I NEGMPISKE  K G L+IKFDIKFPSRL+A+QKSD
Sbjct: 236  ITLDGRELTIPITDIVKPGHEHIIPNEGMPISKERGKKGNLKIKFDIKFPSRLSADQKSD 295

Query: 259  LRRVLGRA 236
            +RRVL R+
Sbjct: 296  IRRVLCRS 303


>gb|AAQ82701.1| potyviral capsid protein interacting protein 1 [Nicotiana tabacum]
          Length = 306

 Score =  422 bits (1084), Expect = e-115
 Identities = 213/310 (68%), Positives = 250/310 (80%), Gaps = 3/310 (0%)
 Frame = -2

Query: 1159 MGVDYYNILKVSRNAAEEDLKKSYKKLAMKWHPDKNAVNTKEAEAKFKQISEAYDVLSDP 980
            MGVDYY ILKVSRNA+EEDLKKSYK+LAMKWHPDKN+   KEAEAKFKQISEAYDVLSDP
Sbjct: 1    MGVDYYKILKVSRNASEEDLKKSYKRLAMKWHPDKNS--EKEAEAKFKQISEAYDVLSDP 58

Query: 979  QKRQIYDVYGEEGLKXXXXXXXXXXSKERDAGGGRRFKFSPRDPEVIFEEFFWGSD-VGQ 803
            QKRQIYD+YG+E LK          +     G GR FKF  RD E IF EFF GSD   +
Sbjct: 59   QKRQIYDIYGDEALKSGQFDPSSPMN-----GNGRGFKFDSRDAEDIFAEFFGGSDGYSR 113

Query: 802  GKSGG--RLKKAASMETKLSCSLEELYKGSRRKMQIARVVLDESGKAVTVEEVLAINIKP 629
              +GG  R++K A +E KL CSLEELYKGS+RKM+I+R+VLD +GK  T+EEVLAI+IKP
Sbjct: 114  SPTGGTVRIRKPAPVENKLPCSLEELYKGSKRKMKISRIVLDVTGKPTTIEEVLAIHIKP 173

Query: 628  GWKKGTKITFPEKGNHEAGATPGDLIFVIDEKPHPIFKRDGNDLLINHSISLLDALTCKT 449
            GWKKGTKITFPEKGNHE GA PGDLIFVIDEKPH +FKRDGNDL+IN  ISL+DAL+ K 
Sbjct: 174  GWKKGTKITFPEKGNHEPGAAPGDLIFVIDEKPHDVFKRDGNDLVINQKISLVDALSGKI 233

Query: 448  LNITTLDGRDLPLKVSGVIKPGQEMVIQNEGMPISKEPSKNGKLRIKFDIKFPSRLTAEQ 269
            +N+ TLDGR+L + ++ V+KPG E +I +EGMPISKEP K G LRIKF++KFPSRL+++Q
Sbjct: 234  INLATLDGRELTIPITDVVKPGHEQIIADEGMPISKEPGKKGNLRIKFEVKFPSRLSSDQ 293

Query: 268  KSDLRRVLGR 239
            K D+RRVLGR
Sbjct: 294  KLDIRRVLGR 303


>ref|XP_002520159.1| Curved DNA-binding protein, putative [Ricinus communis]
            gi|223540651|gb|EEF42214.1| Curved DNA-binding protein,
            putative [Ricinus communis]
          Length = 321

 Score =  415 bits (1066), Expect = e-113
 Identities = 211/321 (65%), Positives = 247/321 (76%), Gaps = 11/321 (3%)
 Frame = -2

Query: 1159 MGVDYYNILKVSRNAAEEDLKKSYKKLAMKWHPDKNAVNTKEAEAKFKQISEAYDVLSDP 980
            MGVDYYNILKV+R AA++DLK++YK+LAMKWHPDKN +N KEAEAKFKQISEAYDVLSDP
Sbjct: 1    MGVDYYNILKVNRKAADDDLKRAYKRLAMKWHPDKNPLNKKEAEAKFKQISEAYDVLSDP 60

Query: 979  QKRQIYDVYGEEGLKXXXXXXXXXXSKERDAGGGRRFKFSPRDPEVIFEEFFWGSDVGQG 800
            QKRQIYD+YGEEGLK                     F+F+PRD E IF EFF GS  G G
Sbjct: 61   QKRQIYDLYGEEGLKSFEFGGGDAPPPPPQTAANGGFRFNPRDAEDIFNEFFGGSGGGGG 120

Query: 799  KS------GGRL-----KKAASMETKLSCSLEELYKGSRRKMQIARVVLDESGKAVTVEE 653
             +       G +     KKAA++E+KL CSLEELYKG+RRKM+I+R V D  GK  TV+E
Sbjct: 121  SAKNGFHKNGEMGNQGTKKAAAIESKLLCSLEELYKGTRRKMRISRSVPDGFGKPKTVDE 180

Query: 652  VLAINIKPGWKKGTKITFPEKGNHEAGATPGDLIFVIDEKPHPIFKRDGNDLLINHSISL 473
            +L I+IKPGWKKGTKITFPEKGN E G    DLIFV+DEKPH +FKRDGNDL++N  +SL
Sbjct: 181  ILKIDIKPGWKKGTKITFPEKGNQEPGVVAADLIFVVDEKPHSVFKRDGNDLIVNQKLSL 240

Query: 472  LDALTCKTLNITTLDGRDLPLKVSGVIKPGQEMVIQNEGMPISKEPSKNGKLRIKFDIKF 293
            L+ALT KT+++TTLDGR L + V+ +IKPG E+VI NEGMPISKEP K GKLRIKFD+ F
Sbjct: 241  LEALTGKTVDLTTLDGRYLSIPVTDIIKPGHEIVIPNEGMPISKEPHKKGKLRIKFDVTF 300

Query: 292  PSRLTAEQKSDLRRVLGRADA 230
            PSRLTAEQKSDL+RVLG  DA
Sbjct: 301  PSRLTAEQKSDLKRVLGGVDA 321


>ref|XP_002311874.1| predicted protein [Populus trichocarpa] gi|222851694|gb|EEE89241.1|
            predicted protein [Populus trichocarpa]
          Length = 317

 Score =  408 bits (1049), Expect = e-111
 Identities = 209/322 (64%), Positives = 246/322 (76%), Gaps = 13/322 (4%)
 Frame = -2

Query: 1159 MGVDYYNILKVSRNAAEEDLKKSYKKLAMKWHPDKNAVNTKEAEAKFKQISEAYDVLSDP 980
            MGVDYYNILK++RNA EED+KK+YK+LAMKWHPDKN VN KEAEAKFK ISEAYDVLSDP
Sbjct: 1    MGVDYYNILKLNRNATEEDMKKAYKRLAMKWHPDKNPVNKKEAEAKFKLISEAYDVLSDP 60

Query: 979  QKRQIYDVYGEEGLKXXXXXXXXXXSKERDAGGGRRFKFSPRDPEVIFEEFFWGSD---- 812
             KRQIYD+YGEEGLK                  G  F+F+PRD E IF EFF G      
Sbjct: 61   NKRQIYDLYGEEGLKSFDQIPPPT------TNVGASFRFNPRDAEDIFAEFFGGGGGSGG 114

Query: 811  VGQG--------KSGGRL-KKAASMETKLSCSLEELYKGSRRKMQIARVVLDESGKAVTV 659
            VG+G          G  L +KAA +E+KL C+LEELYKG+RRKM+I+R V D+ GK  TV
Sbjct: 115  VGKGYFRNNNGNNYGAELNRKAAPVESKLLCTLEELYKGTRRKMRISRSVPDDFGKPKTV 174

Query: 658  EEVLAINIKPGWKKGTKITFPEKGNHEAGATPGDLIFVIDEKPHPIFKRDGNDLLINHSI 479
            EE+L I+IKPGWKKGTKITFPEKGN E G TP DLIFV+DEKPH +FKRDGNDL+IN  I
Sbjct: 175  EEILKIDIKPGWKKGTKITFPEKGNQEPGITPADLIFVVDEKPHSVFKRDGNDLVINQKI 234

Query: 478  SLLDALTCKTLNITTLDGRDLPLKVSGVIKPGQEMVIQNEGMPISKEPSKNGKLRIKFDI 299
            SLL+ALT KT+ +TTLDGR LP+ V+ ++KPGQE+++ NEGMPISKEP+K G LRIKFD+
Sbjct: 235  SLLEALTGKTIELTTLDGRYLPVPVTDIVKPGQELLVSNEGMPISKEPTKRGNLRIKFDV 294

Query: 298  KFPSRLTAEQKSDLRRVLGRAD 233
             FP+RLT EQKSDL++ LG  D
Sbjct: 295  TFPTRLTVEQKSDLKKALGAPD 316


Top