BLASTX nr result

ID: Salvia21_contig00017743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00017743
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532374.1| basic helix-loop-helix-containing protein, p...   134   8e-30
ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29
ref|NP_172105.4| uncharacterized basic helix-loop-helix protein ...   119   3e-25
sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-c...   119   3e-25

>ref|XP_002532374.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223527930|gb|EEF30017.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 310

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/84 (75%), Positives = 74/84 (88%)
 Frame = +1

Query: 4   EMKSTGTRPDNTTMATVISACAHLGALDKGKEMHLYMMQAEFNIDVYIGSALIDMYAKCG 183
           +M  TG  PD  TMATVISACAHLGALD GKE+HLY+MQ  F++DVYIGS+LIDMYAKCG
Sbjct: 163 QMIKTGICPDEVTMATVISACAHLGALDLGKEIHLYVMQNGFDLDVYIGSSLIDMYAKCG 222

Query: 184 VVERALVVFFKLQEKNLFCWSSVI 255
            ++R+L+VFFKLQEKNLFCW+SVI
Sbjct: 223 SLDRSLLVFFKLQEKNLFCWNSVI 246


>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/84 (73%), Positives = 72/84 (85%)
 Frame = +1

Query: 4   EMKSTGTRPDNTTMATVISACAHLGALDKGKEMHLYMMQAEFNIDVYIGSALIDMYAKCG 183
           EM   G  PD  TMATVISACAHLGALD GKE+H Y+MQ  FN+DVYIGSALIDMYAKCG
Sbjct: 233 EMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCG 292

Query: 184 VVERALVVFFKLQEKNLFCWSSVI 255
            ++R+L++FFKL+EKNLFCW+SVI
Sbjct: 293 SLDRSLLMFFKLREKNLFCWNSVI 316


>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/84 (70%), Positives = 74/84 (88%)
 Frame = +1

Query: 4   EMKSTGTRPDNTTMATVISACAHLGALDKGKEMHLYMMQAEFNIDVYIGSALIDMYAKCG 183
           EM++ G  PD  TMAT+ISACAHLGALD GKE+HLY M+  F++DVYIGSALIDMYAKCG
Sbjct: 163 EMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCG 222

Query: 184 VVERALVVFFKLQEKNLFCWSSVI 255
            ++++LVVFFKL++KNLFCW+S+I
Sbjct: 223 SLDKSLVVFFKLRKKNLFCWNSII 246


>ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
            gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity
            to an unknown protein T5J8.5 gi|4263522 from Arabidopsis
            thaliana BAC T5J8 gb|AC004044 and contains multiple PPR
            PF|01535 repeats. ESTs gb|AV565358, gb|AV558710,
            gb|AV524184 come from this gene [Arabidopsis thaliana]
            gi|332189826|gb|AEE27947.1| uncharacterized basic
            helix-loop-helix protein [Arabidopsis thaliana]
          Length = 1322

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/84 (64%), Positives = 68/84 (80%)
 Frame = +1

Query: 4    EMKSTGTRPDNTTMATVISACAHLGALDKGKEMHLYMMQAEFNIDVYIGSALIDMYAKCG 183
            +M   G  PD  TM+TVISACAHLG L+ GKE+H+Y +Q  F +DVYIGSAL+DMY+KCG
Sbjct: 1022 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 1081

Query: 184  VVERALVVFFKLQEKNLFCWSSVI 255
             +ERAL+VFF L +KNLFCW+S+I
Sbjct: 1082 SLERALLVFFNLPKKNLFCWNSII 1105


>sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
          Length = 577

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/84 (64%), Positives = 68/84 (80%)
 Frame = +1

Query: 4   EMKSTGTRPDNTTMATVISACAHLGALDKGKEMHLYMMQAEFNIDVYIGSALIDMYAKCG 183
           +M   G  PD  TM+TVISACAHLG L+ GKE+H+Y +Q  F +DVYIGSAL+DMY+KCG
Sbjct: 277 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 336

Query: 184 VVERALVVFFKLQEKNLFCWSSVI 255
            +ERAL+VFF L +KNLFCW+S+I
Sbjct: 337 SLERALLVFFNLPKKNLFCWNSII 360


Top