BLASTX nr result

ID: Salvia21_contig00015660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00015660
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat...   228   2e-57
emb|CBI28823.3| unnamed protein product [Vitis vinifera]              228   2e-57
ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|2...   215   1e-53
ref|XP_002524843.1| pentatricopeptide repeat-containing protein,...   213   9e-53
ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   198   2e-48

>ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g10330-like [Vitis vinifera]
          Length = 531

 Score =  228 bits (582), Expect = 2e-57
 Identities = 120/220 (54%), Positives = 156/220 (70%), Gaps = 5/220 (2%)
 Frame = +2

Query: 425  KCPKQVKQVHSLLITHGYLLIRD-----LWVNTLLYNTLIRTYLNLSRPHTSLSLFREML 589
            K PKQ+KQVHSLLIT+G+LL         W+ TLLYN+LIR YLN   PH +L +F  ML
Sbjct: 25   KHPKQIKQVHSLLITNGHLLPCSNASNLKWMATLLYNSLIRGYLNFVEPHKTLLIFTHML 84

Query: 590  HSQAAPNSYTFPSVLKAIASLSKSYGTSRIGYSLHAQCVERGLLDDPFVRTSFLSLYSQF 769
              QA PN+ TFPS++K  AS S S     IG  LH   ++RGL  D F++TS + LY++ 
Sbjct: 85   AHQAPPNNLTFPSIIKKAASCSPSLAFM-IGTPLHTHVIKRGLSHDLFIQTSLVVLYARL 143

Query: 770  GDIRSAHKVFDEIPQPCIVSNNAMLDAFGKGGNMDLAISMFFSMPKRDVYSWTTIINGYA 949
              +  A +VF+EI +PC+VS+NAMLDA GK G+M  A+ +F SMP+RDV SWT+IING+ 
Sbjct: 144  CKVSDACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFG 203

Query: 950  QNGCFMEAIRFFIEMMRDEDVIRGLLRPSEATFVSVLSSC 1069
            +N CF EAI+FF++MM  EDV   L++P+EATFVSVLSSC
Sbjct: 204  RNRCFEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSC 243


>emb|CBI28823.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  228 bits (582), Expect = 2e-57
 Identities = 120/220 (54%), Positives = 156/220 (70%), Gaps = 5/220 (2%)
 Frame = +2

Query: 425  KCPKQVKQVHSLLITHGYLLIRD-----LWVNTLLYNTLIRTYLNLSRPHTSLSLFREML 589
            K PKQ+KQVHSLLIT+G+LL         W+ TLLYN+LIR YLN   PH +L +F  ML
Sbjct: 25   KHPKQIKQVHSLLITNGHLLPCSNASNLKWMATLLYNSLIRGYLNFVEPHKTLLIFTHML 84

Query: 590  HSQAAPNSYTFPSVLKAIASLSKSYGTSRIGYSLHAQCVERGLLDDPFVRTSFLSLYSQF 769
              QA PN+ TFPS++K  AS S S     IG  LH   ++RGL  D F++TS + LY++ 
Sbjct: 85   AHQAPPNNLTFPSIIKKAASCSPSLAFM-IGTPLHTHVIKRGLSHDLFIQTSLVVLYARL 143

Query: 770  GDIRSAHKVFDEIPQPCIVSNNAMLDAFGKGGNMDLAISMFFSMPKRDVYSWTTIINGYA 949
              +  A +VF+EI +PC+VS+NAMLDA GK G+M  A+ +F SMP+RDV SWT+IING+ 
Sbjct: 144  CKVSDACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFG 203

Query: 950  QNGCFMEAIRFFIEMMRDEDVIRGLLRPSEATFVSVLSSC 1069
            +N CF EAI+FF++MM  EDV   L++P+EATFVSVLSSC
Sbjct: 204  RNRCFEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSC 243


>ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|222874920|gb|EEF12051.1|
            predicted protein [Populus trichocarpa]
          Length = 474

 Score =  215 bits (548), Expect = 1e-53
 Identities = 118/223 (52%), Positives = 145/223 (65%), Gaps = 8/223 (3%)
 Frame = +2

Query: 425  KCPKQVKQVHSLLITHGYLLIR--------DLWVNTLLYNTLIRTYLNLSRPHTSLSLFR 580
            K   QVKQ+HSLL T G L             W  TLL+NTL R YLN  +   +L LF 
Sbjct: 18   KHQNQVKQIHSLLTTKGLLFYNPNTSPNDNSKWKTTLLFNTLNRAYLNFGQHQQTLHLFA 77

Query: 581  EMLHSQAAPNSYTFPSVLKAIASLSKSYGTSRIGYSLHAQCVERGLLDDPFVRTSFLSLY 760
             ML  Q  PNS+TFPSV+KA      ++    IG SLH Q + RG+L DPF++TS L +Y
Sbjct: 78   LMLAHQTPPNSHTFPSVIKAA-----THSCLFIGTSLHTQAINRGVLYDPFIQTSLLGMY 132

Query: 761  SQFGDIRSAHKVFDEIPQPCIVSNNAMLDAFGKGGNMDLAISMFFSMPKRDVYSWTTIIN 940
            SQFG + +A KVFDEI  PCIV  NA LDA+ K G+M  A  +F SMPKRDV SWT++IN
Sbjct: 133  SQFGYLLNACKVFDEISHPCIVEYNATLDAYAKNGDMGSACCLFKSMPKRDVVSWTSVIN 192

Query: 941  GYAQNGCFMEAIRFFIEMMRDEDVIRGLLRPSEATFVSVLSSC 1069
            G+A+NG F EAIR F EMM  +DV    ++P+EAT+VSVLSSC
Sbjct: 193  GFAKNGLFGEAIRLFREMMLHDDVKCCFVKPNEATYVSVLSSC 235


>ref|XP_002524843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535903|gb|EEF37563.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  213 bits (541), Expect = 9e-53
 Identities = 114/221 (51%), Positives = 147/221 (66%), Gaps = 6/221 (2%)
 Frame = +2

Query: 425  KCPKQVKQVHSLLITHGYLLIRDL------WVNTLLYNTLIRTYLNLSRPHTSLSLFREM 586
            KC  QV+Q+HSLL+T  +LL          W +TL YNTL R YLN  + + ++ LF  M
Sbjct: 18   KCQNQVEQIHSLLLTKAHLLFNPTISSHSKWKSTLFYNTLTRAYLNFGQTYNTVYLFTLM 77

Query: 587  LHSQAAPNSYTFPSVLKAIASLSKSYGTSRIGYSLHAQCVERGLLDDPFVRTSFLSLYSQ 766
            L  Q  PNS+TFPS++KA      S GTS     LH Q ++RG+L DPFV+TS L+ YSQ
Sbjct: 78   LAHQTPPNSHTFPSLIKAATLSFPSIGTS-----LHTQVIKRGVLCDPFVQTSLLAFYSQ 132

Query: 767  FGDIRSAHKVFDEIPQPCIVSNNAMLDAFGKGGNMDLAISMFFSMPKRDVYSWTTIINGY 946
             G + +AHKVFD I  P IV  NAMLDA+ K  +M  AI +F  M KRDV SWTT+I+G+
Sbjct: 133  IGCLYNAHKVFDGILHPWIVEYNAMLDAYAKNNDMGSAILLFKRMLKRDVVSWTTVISGF 192

Query: 947  AQNGCFMEAIRFFIEMMRDEDVIRGLLRPSEATFVSVLSSC 1069
            +++G F EAI FF  M+  EDV  GL++P+EAT+VSVLSSC
Sbjct: 193  SRSGLFREAINFFRVMIAHEDVSLGLVKPNEATYVSVLSSC 233


>ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At1g10330-like [Vitis vinifera]
          Length = 454

 Score =  198 bits (503), Expect = 2e-48
 Identities = 103/202 (50%), Positives = 140/202 (69%), Gaps = 1/202 (0%)
 Frame = +2

Query: 467  THG-YLLIRDLWVNTLLYNTLIRTYLNLSRPHTSLSLFREMLHSQAAPNSYTFPSVLKAI 643
            TH  ++ +++ W+   LYN+LIR YLN   PH +L +F  ML  QA PN+ TFPS++K  
Sbjct: 16   THADFIKVKEQWL-AHLYNSLIRGYLNFVEPHKTLLIFTHMLAHQARPNNLTFPSIIKKA 74

Query: 644  ASLSKSYGTSRIGYSLHAQCVERGLLDDPFVRTSFLSLYSQFGDIRSAHKVFDEIPQPCI 823
            AS   S     IG  LH   ++RGL  D F++TS + LY++   +  A  VF+EI +PC+
Sbjct: 75   ASCLPSLAFM-IGTPLHTHVIKRGLWHDLFIQTSLVVLYARLCKVSDACPVFEEISRPCV 133

Query: 824  VSNNAMLDAFGKGGNMDLAISMFFSMPKRDVYSWTTIINGYAQNGCFMEAIRFFIEMMRD 1003
            VS+NAMLDA GK G+M  A+ +F SMP+RDV SWT+IING+ +N CF EAI+FF++MM  
Sbjct: 134  VSSNAMLDALGKNGDMGSALXLFESMPERDVVSWTSIINGFGRNRCFEEAIQFFVKMMGH 193

Query: 1004 EDVIRGLLRPSEATFVSVLSSC 1069
            EDV   L++P+EATFVSVLSSC
Sbjct: 194  EDVRSCLVKPNEATFVSVLSSC 215


Top