BLASTX nr result

ID: Salvia21_contig00014278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00014278
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   141   6e-32
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   141   6e-32
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   140   1e-31
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...   137   9e-31
ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [S...   137   1e-30

>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/67 (94%), Positives = 65/67 (97%)
 Frame = -3

Query: 363 IHHSVGERTQVLQDVAADPTLPRTKSVRCANCGHGEAVFFQATARGEEGMTLFFVCCNPN 184
           IHHSVGERTQVLQDVAADPTLPRTKSVRC+ C HGEAVFFQATARGEEGMTLFFVCCNPN
Sbjct: 48  IHHSVGERTQVLQDVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107

Query: 183 CGNRWRD 163
           CG+RWRD
Sbjct: 108 CGHRWRD 114


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  141 bits (355), Expect = 6e-32
 Identities = 64/67 (95%), Positives = 64/67 (95%)
 Frame = -3

Query: 363 IHHSVGERTQVLQDVAADPTLPRTKSVRCANCGHGEAVFFQATARGEEGMTLFFVCCNPN 184
           IHHSVGERTQVLQDVAADPTLPRTKSVRCA C HGEAVFFQATARGEEGMTLFFVCCNPN
Sbjct: 48  IHHSVGERTQVLQDVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107

Query: 183 CGNRWRD 163
           CG RWRD
Sbjct: 108 CGYRWRD 114


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  140 bits (352), Expect = 1e-31
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = -3

Query: 363 IHHSVGERTQVLQDVAADPTLPRTKSVRCANCGHGEAVFFQATARGEEGMTLFFVCCNPN 184
           IHH+VGERTQVLQDVAADPTLPRTK+VRCA C HGEAVFFQATARGEEGMTLFFVCCNPN
Sbjct: 48  IHHAVGERTQVLQDVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107

Query: 183 CGNRWRD 163
           CG+RWRD
Sbjct: 108 CGHRWRD 114


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/67 (91%), Positives = 63/67 (94%)
 Frame = -3

Query: 363 IHHSVGERTQVLQDVAADPTLPRTKSVRCANCGHGEAVFFQATARGEEGMTLFFVCCNPN 184
           IHHSV ERTQVLQDVAADPTLPRTK+VRC  C HGEAVFFQATARGEEGMTLFFVCCNPN
Sbjct: 48  IHHSVAERTQVLQDVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107

Query: 183 CGNRWRD 163
           CG+RWRD
Sbjct: 108 CGHRWRD 114


>ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [Sorghum bicolor]
           gi|241944049|gb|EES17194.1| hypothetical protein
           SORBIDRAFT_08g018130 [Sorghum bicolor]
          Length = 114

 Score =  137 bits (344), Expect = 1e-30
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = -3

Query: 363 IHHSVGERTQVLQDVAADPTLPRTKSVRCANCGHGEAVFFQATARGEEGMTLFFVCCNPN 184
           +HHS GE TQVLQDVA DPTLPRTKSVRCA+CGHGEAVFFQATARGEEGMTLFFVCCNP+
Sbjct: 48  VHHSAGEFTQVLQDVAGDPTLPRTKSVRCASCGHGEAVFFQATARGEEGMTLFFVCCNPS 107

Query: 183 CGNRWRD 163
           CGNRWR+
Sbjct: 108 CGNRWRE 114


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