BLASTX nr result

ID: Salvia21_contig00010051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00010051
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi...    74   7e-19
ref|XP_003555205.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-14
ref|XP_003592666.1| Pentatricopeptide repeat-containing protein ...    67   9e-14
ref|XP_002521239.1| pentatricopeptide repeat-containing protein,...    62   3e-13
gb|AAU04769.1| pentatricopeptide (PPR) repeat protein-like [Cucu...    54   6e-12

>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
           protein product [Vitis vinifera]
          Length = 435

 Score = 74.3 bits (181), Expect(2) = 7e-19
 Identities = 40/68 (58%), Positives = 51/68 (75%)
 Frame = +1

Query: 205 VRCALTKQGQRFLSSLAAAEEPSTAASLLRKFAASSSKHVALTTLSHLLSVSDSHPRLSS 384
           ++CAL+KQGQ FLSS+A   +PS +  L+ KF ASSSK +AL  LSHLLS + +HP LSS
Sbjct: 21  IQCALSKQGQLFLSSVA--RDPSASNRLICKFIASSSKSIALNALSHLLSPTTTHPYLSS 78

Query: 385 LAFPVSSR 408
           LA P+ SR
Sbjct: 79  LALPLYSR 86



 Score = 44.7 bits (104), Expect(2) = 7e-19
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = +2

Query: 452 VCLQLYTAIEQESWFSWNAKLAADVIAFLYR 544
           + L LY+ I + SWFSWN KL ADVIA LY+
Sbjct: 79  LALPLYSRISEASWFSWNPKLIADVIALLYK 109


>ref|XP_003555205.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17033-like [Glycine max]
          Length = 457

 Score = 67.0 bits (162), Expect(2) = 3e-14
 Identities = 36/61 (59%), Positives = 45/61 (73%)
 Frame = +1

Query: 208 RCALTKQGQRFLSSLAAAEEPSTAASLLRKFAASSSKHVALTTLSHLLSVSDSHPRLSSL 387
           RC LTKQGQRFL+ L  +   +TA +L+R+F  +S K V L+TLSHLLS S S+P LSSL
Sbjct: 33  RCTLTKQGQRFLTKLTTSS--ATADNLIRRFLLASPKSVVLSTLSHLLSPSTSYPHLSSL 90

Query: 388 A 390
           A
Sbjct: 91  A 91



 Score = 36.2 bits (82), Expect(2) = 3e-14
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 461 QLYTAIEQESWFSWNAKLAADVIAFLYRL 547
           QLYT I Q  WFSWN    A++ A L+ L
Sbjct: 93  QLYTGISQAPWFSWNPTTVAELAALLHSL 121


>ref|XP_003592666.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481714|gb|AES62917.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 454

 Score = 67.0 bits (162), Expect(2) = 9e-14
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = +1

Query: 202 SVRCALTKQGQRFLSSLAAAEEPSTAASLLRKFAASSSKHVALTTLSHLLSVSDSHPRLS 381
           ++RC LTKQGQRFL+ L+     +   +L+RKF  SS K V L+TL+HLLS + +H  LS
Sbjct: 39  TIRCTLTKQGQRFLTKLSTTN--TNTENLIRKFVQSSPKSVLLSTLTHLLSPTTAHHPLS 96

Query: 382 SLAFPVSSR 408
           SLA P+ +R
Sbjct: 97  SLALPLYTR 105



 Score = 34.7 bits (78), Expect(2) = 9e-14
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 452 VCLQLYTAIEQESWFSWNAKLAADVIAFLYR 544
           + L LYT I +  W++WN  + AD+I  L++
Sbjct: 98  LALPLYTRISESQWYTWNPTIFADLITLLHK 128


>ref|XP_002521239.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539507|gb|EEF41095.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 460

 Score = 62.4 bits (150), Expect(2) = 3e-13
 Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
 Frame = +1

Query: 208 RCA-LTKQGQRFLSSLA-AAEEPSTAAS--LLRKFAASSSKHVALTTLSHLLSVSDSHPR 375
           RCA L+KQGQRFLSSLA A  +  T A+  L++KF A+S K +AL  LSHLL+   SH  
Sbjct: 41  RCAALSKQGQRFLSSLAIATTKGDTVATNRLIKKFVAASPKSIALDALSHLLNPHSSHSH 100

Query: 376 LSSLAF 393
           LSSLAF
Sbjct: 101 LSSLAF 106



 Score = 37.4 bits (85), Expect(2) = 3e-13
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +2

Query: 464 LYTAIEQESWFSWNAKLAADVIAFL 538
           LY  I +  WF WN KL ADV+AFL
Sbjct: 108 LYLKIAEARWFQWNPKLVADVVAFL 132


>gb|AAU04769.1| pentatricopeptide (PPR) repeat protein-like [Cucumis melo]
          Length = 488

 Score = 54.3 bits (129), Expect(2) = 6e-12
 Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
 Frame = +1

Query: 127 PMFAGGGLHLAAPP-PTSPGFRHY----RQSVRCA-LTKQGQRFLSSLA---AAEEPSTA 279
           P   G G+ L   P     GFR Y       V+C  LTKQ  RFLS+L+   A  + S  
Sbjct: 9   PYVIGDGVRLFLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTGATGDQSAT 68

Query: 280 ASLLRKFAASSSKHVALTTLSHLLSVSDSHPRLSSLAFPVSSR 408
             L+RKF ASS K + L+ LS+++S     P L S A  + SR
Sbjct: 69  NRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSR 111



 Score = 41.2 bits (95), Expect(2) = 6e-12
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = +2

Query: 458 LQLYTAIEQESWFSWNAKLAADVIAFL 538
           L LY+ I + SWF+WN+KL AD++AFL
Sbjct: 106 LTLYSRITEASWFTWNSKLVADLVAFL 132


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