BLASTX nr result

ID: Salvia21_contig00009834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00009834
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    91   1e-18
ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat...    91   2e-17
ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat...    93   2e-17
emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]    93   2e-17
ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat...    86   4e-17

>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 90.9 bits (224), Expect(2) = 1e-18
 Identities = 45/107 (42%), Positives = 64/107 (59%)
 Frame = +2

Query: 203 DVFNQLPSKGLHRDVWIYTIIIDSLCQEGSLLEVQSLLVEMENCGSGPDRVTYNIIIRSL 382
           D+F++L SKGLH DV  YTI+I+ LCQ+G L E   L  EM+  G  P+  TYN+I R  
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGF 519

Query: 383 LKQNELHKATSFMEEMRQKGFSVDFATSTVPTDQAEEQSGDWFFPQI 523
           L+ NE  +A    +EM  +GFS+D +T+T+  +   +   D    QI
Sbjct: 520 LRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQI 566



 Score = 27.3 bits (59), Expect(2) = 1e-18
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 76  NRFVESWKLFKDMESQQAHPDLHTYNILFD 165
           +R  E+  L K +E     PD+H Y+I+ D
Sbjct: 418 HRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 447


>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score = 90.5 bits (223), Expect(2) = 2e-17
 Identities = 47/110 (42%), Positives = 61/110 (55%)
 Frame = +2

Query: 203 DVFNQLPSKGLHRDVWIYTIIIDSLCQEGSLLEVQSLLVEMENCGSGPDRVTYNIIIRSL 382
           D+F+ L SKGLH DVW YTI+I+ LC +G L E   L  EM   G  PD  TYN+I R  
Sbjct: 480 DLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGF 539

Query: 383 LKQNELHKATSFMEEMRQKGFSVDFATSTVPTDQAEEQSGDWFFPQIDEE 532
           L+ NE   A   ++EM  +GFS D +T T+  +   +   D    QI  E
Sbjct: 540 LRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHE 589



 Score = 23.5 bits (49), Expect(2) = 2e-17
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 88  ESWKLFKDMESQQAHPDLHTYNILFD 165
           ++  + K +E     PD+ +YNI+ D
Sbjct: 442 QAMAMLKAIEGSNLAPDIQSYNIVID 467


>ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/110 (42%), Positives = 64/110 (58%)
 Frame = +2

Query: 203 DVFNQLPSKGLHRDVWIYTIIIDSLCQEGSLLEVQSLLVEMENCGSGPDRVTYNIIIRSL 382
           D+F+ L SKGLH +VW YTI+I+ LCQ+G L E   L  EM+  G  P+  TYN+I R  
Sbjct: 465 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGF 524

Query: 383 LKQNELHKATSFMEEMRQKGFSVDFATSTVPTDQAEEQSGDWFFPQIDEE 532
           L+ NE  +    ++EM  +GFS D +TSTV  +   +   D    QI  E
Sbjct: 525 LRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574


>emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/110 (42%), Positives = 64/110 (58%)
 Frame = +2

Query: 203 DVFNQLPSKGLHRDVWIYTIIIDSLCQEGSLLEVQSLLVEMENCGSGPDRVTYNIIIRSL 382
           D+F+ L SKGLH +VW YTI+I+ LCQ+G L E   L  EM+  G  P+  TYN+I R  
Sbjct: 474 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGF 533

Query: 383 LKQNELHKATSFMEEMRQKGFSVDFATSTVPTDQAEEQSGDWFFPQIDEE 532
           L+ NE  +    ++EM  +GFS D +TSTV  +   +   D    QI  E
Sbjct: 534 LRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583


>ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score = 85.9 bits (211), Expect(2) = 4e-17
 Identities = 42/101 (41%), Positives = 57/101 (56%)
 Frame = +2

Query: 203 DVFNQLPSKGLHRDVWIYTIIIDSLCQEGSLLEVQSLLVEMENCGSGPDRVTYNIIIRSL 382
           D+F+ L SKGLH  VW Y I+I  LC+ G L E   L +EM+     PD  TYN I R  
Sbjct: 462 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 521

Query: 383 LKQNELHKATSFMEEMRQKGFSVDFATSTVPTDQAEEQSGD 505
           L+ NE  +A   +EEM  +GFS D +T+T+  +   +   D
Sbjct: 522 LQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLD 562



 Score = 26.9 bits (58), Expect(2) = 4e-17
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 88  ESWKLFKDMESQQAHPDLHTYNILFD 165
           E+  L K +E+   +PD+  YNI+ D
Sbjct: 424 EAMALLKAIEASNLNPDIQVYNIIID 449



 Score = 53.5 bits (127), Expect(2) = 9e-07
 Identities = 27/88 (30%), Positives = 49/88 (55%)
 Frame = +2

Query: 206 VFNQLPSKGLHRDVWIYTIIIDSLCQEGSLLEVQSLLVEMENCGSGPDRVTYNIIIRSLL 385
           + NQ+ +  +  DV I++ ++D+LC+EG + E   ++  M   G  PD VTY  ++    
Sbjct: 253 LLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHC 312

Query: 386 KQNELHKATSFMEEMRQKGFSVDFATST 469
            Q+E+ +A    + M +KGF+ D  + T
Sbjct: 313 LQSEMDEAVKVFDMMVRKGFAPDVISYT 340



 Score = 24.3 bits (51), Expect(2) = 9e-07
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 88  ESWKLFKDMESQQAHPDLHTYNILFDVL 171
           E++ LF  M  Q   PD+ TY  L   L
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHAL 241


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