BLASTX nr result
ID: Salvia21_contig00008174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00008174
(1310 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi... 416 e-114
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera] 415 e-113
ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|2... 393 e-107
ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ... 389 e-105
ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi... 383 e-104
>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 416 bits (1069), Expect = e-114
Identities = 195/322 (60%), Positives = 259/322 (80%)
Frame = +2
Query: 14 QSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQDIITWNSLISSYSDNG 193
+SIHC MIK +M E V++ NSLI+MYGK G LT A R+F +DI+TWN+LISSY+ G
Sbjct: 422 RSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPRDIVTWNTLISSYAHCG 481
Query: 194 NCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSVAT 373
+ +A+S +D M+ LKPN+ATL +LSAC+ +A+LE+G+K+H+YI +++S+AT
Sbjct: 482 HFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIAT 541
Query: 374 SLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDVRP 553
+L+DMYAKCGQ++ ++EIF+S+ E+D+I+WNVMIS YGMHG +SAIE FQ+M+ES +P
Sbjct: 542 ALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKP 601
Query: 554 NDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAEALV 733
N TFLAVLSACAH+GLV EGK LF KM++YS+AP LKHYACMVDL GRSG L EAEALV
Sbjct: 602 NGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALV 661
Query: 734 LSMPCTPDGGIWGSLLTSCKLHNNPAMGMKIAKHAIEADPENGGYYILVSDFYSSMGMWE 913
LSMP +PDGG+WG+LL+SCK+HN MG++IAKHAI++D EN GYY+++S+ YSS+G WE
Sbjct: 662 LSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGKWE 721
Query: 914 DVGQVRKTMKDRGVRKTVGWSA 979
+ + R MK+RGVRK GWSA
Sbjct: 722 EAEKARGIMKERGVRKKTGWSA 743
Score = 113 bits (283), Expect = 9e-23
Identities = 90/379 (23%), Positives = 166/379 (43%), Gaps = 64/379 (16%)
Frame = +2
Query: 11 GQSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHA-SQDIITWNSLISSYSD 187
G+ +H ++KT M + + L++MY KCG EA R F ++DII+W S+IS+YS
Sbjct: 257 GRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSR 316
Query: 188 NGNCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSV 367
G + I F M+ + P+ ++ +LS+ + + + K H I+ T D V
Sbjct: 317 MGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMV 376
Query: 368 ATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYG-------------------- 487
+L+ MY K G + +A++ F ++E++ +WN+M+S YG
Sbjct: 377 QNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIHCYMIKNLMDEN 436
Query: 488 -------MHGYGKS-----AIEIFQR------------------------------MKES 541
+ YGKS A IF R M
Sbjct: 437 VSVNNSLIDMYGKSGNLTIARRIFCRIPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLE 496
Query: 542 DVRPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEA 721
D++PN T ++VLSAC+H ++EG+ + + + L ++D+Y + G L+++
Sbjct: 497 DLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKS 556
Query: 722 EALVLSMPCTPDGGIWGSLLTSCKLHNNPAMGMKIAKHAIEADPE-NGGYYILVSDFYSS 898
+ SM D W +++ +H + ++ + E+ + NG ++ V +
Sbjct: 557 REIFNSMH-ERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAH 615
Query: 899 MGMWEDVGQVRKTMKDRGV 955
G+ ++ + M+D V
Sbjct: 616 AGLVKEGKYLFGKMQDYSV 634
Score = 110 bits (274), Expect = 1e-21
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 8/249 (3%)
Frame = +2
Query: 2 IGFGQSIHCCMIKTMMLEKVTIV-NSLINMYGKCGKLTEAERLFHHAS-QDIITWNSLIS 175
+ +G+SIH + K + + V +S + MY KCG L EA +F +D++ W +L+
Sbjct: 149 VNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVI 208
Query: 176 SYSDNGNC---LKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEG 346
NG L+ + + +PN TL AC + AL +G+ +H +++ G
Sbjct: 209 GCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTG 268
Query: 347 LTYDVSVATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQ 526
+ Y V + L+ MY+KCG + A F + KDIISW MIS Y G+ I++F
Sbjct: 269 MDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFW 328
Query: 527 RMKESDVRPNDQTFLAVLSACAHSGLVDEGKSLFHKM---KEYSLAPTLKHYACMVDLYG 697
M S + P+ +LS+ ++S V E K+ FH + + Y+L +++ ++ +Y
Sbjct: 329 EMLVSGIYPDGIVISCMLSSFSNSMRVFEAKA-FHGLIIRRHYTLDQMVQN--ALLSMYC 385
Query: 698 RSGYLDEAE 724
+ G+L AE
Sbjct: 386 KFGFLKLAE 394
Score = 99.8 bits (247), Expect = 1e-18
Identities = 61/238 (25%), Positives = 119/238 (50%), Gaps = 5/238 (2%)
Frame = +2
Query: 23 HCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHAS-QDIITWNSLISSYSDNGNC 199
H +I + + I + LI++Y K + + LF +D WNS+I ++ NG
Sbjct: 55 HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEY 114
Query: 200 LKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGL-TYDVSVATS 376
+A+ F+ M + PN T+ +++++CA++ + G+ IH + + GL + +V +S
Sbjct: 115 SRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSS 174
Query: 377 LVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEI---FQRMKESDV 547
V MY+KCG ++ A +FD I +D+++W ++ +G K +E R+
Sbjct: 175 FVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGE 234
Query: 548 RPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEA 721
RPN +T AC + G + EG+ L + + + + + ++ +Y + G +EA
Sbjct: 235 RPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEA 292
Score = 78.6 bits (192), Expect = 3e-12
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Frame = +2
Query: 290 QIAALEKGKKIHDYILEEGLTYDVSVATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNV 469
QI++L+ + H +I+ G + ++ +A+ L+ +YA + + E+FD I +D WN
Sbjct: 44 QISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNS 103
Query: 470 MISCYGMHGYGKSAIEIFQRMKESDVRPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYS 649
+I + +G A++ +Q M+ S+ PN T ++++CA LV+ G+S+ + +
Sbjct: 104 IIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLG 163
Query: 650 L-APTLKHYACMVDLYGRSGYLDEAEALVLSMPCTPDGGIWGSLLTSCKLHNNPAMGMK- 823
L + + + V +Y + G L+EA V D W +L+ C + MG++
Sbjct: 164 LFSGSSAVGSSFVYMYSKCGVLEEAYG-VFDEILFRDVVAWTALVIGCVQNGESKMGLEC 222
Query: 824 -IAKHAIEADPENGGYYILVSDF 889
H I D E + L F
Sbjct: 223 LCEMHRIGGDGERPNFRTLEGGF 245
>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 415 bits (1066), Expect = e-113
Identities = 195/322 (60%), Positives = 258/322 (80%)
Frame = +2
Query: 14 QSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQDIITWNSLISSYSDNG 193
+SIHC MIK +M E V++ NSLI+MYGK G LT A R+F +DI+TWN+LISSY+ G
Sbjct: 789 RSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPRDIVTWNTLISSYAHCG 848
Query: 194 NCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSVAT 373
+ +A+S +D M+ LKPN+ATL +LSAC+ +A+LE+G+K+H+YI +++S+AT
Sbjct: 849 HFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIAT 908
Query: 374 SLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDVRP 553
+L+DMYAKCGQ++ ++EIF+S+ E+D+I+WNVMIS YGMHG +SAIE FQ+M+ES +P
Sbjct: 909 ALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKP 968
Query: 554 NDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAEALV 733
N TFLAVLSACAH+GLV EGK LF KM++YS+AP LKHYACMVDL GRSG L EAEALV
Sbjct: 969 NGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALV 1028
Query: 734 LSMPCTPDGGIWGSLLTSCKLHNNPAMGMKIAKHAIEADPENGGYYILVSDFYSSMGMWE 913
LSMP +PDGG+WG+LL+SCK+HN MG++IAKHAI +D EN GYY+++S+ YSS+G WE
Sbjct: 1029 LSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVMISNMYSSIGKWE 1088
Query: 914 DVGQVRKTMKDRGVRKTVGWSA 979
+ + R MK+RGVRK GWSA
Sbjct: 1089 EAEKARGIMKERGVRKKTGWSA 1110
Score = 127 bits (318), Expect = 8e-27
Identities = 74/260 (28%), Positives = 137/260 (52%), Gaps = 1/260 (0%)
Frame = +2
Query: 11 GQSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHA-SQDIITWNSLISSYSD 187
G+ +H ++KT M + +SL++MY KCG EA R F ++DII+W S+IS+YS
Sbjct: 586 GRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSR 645
Query: 188 NGNCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSV 367
G + I F M+ + P+ ++ +LS+ + + + K H I+ T D V
Sbjct: 646 MGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMV 705
Query: 368 ATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDV 547
+L+ MY K G + +A++ F ++E++ +WN+M+S YG G I +F+ M+ +
Sbjct: 706 QNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGI 765
Query: 548 RPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAEA 727
+ + ++V+S+C+ G +S+ M + + + ++D+YG+SG L A
Sbjct: 766 ESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARR 825
Query: 728 LVLSMPCTPDGGIWGSLLTS 787
+ +P D W +L++S
Sbjct: 826 IFCRIP--RDIVTWNTLISS 843
Score = 89.0 bits (219), Expect = 2e-15
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Frame = +2
Query: 245 KPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSVATSLVDMYAKCGQIDMAKE 424
+PN TL AC + AL +G+ +H +++ G+ Y V +SL+ MY+KCG + A
Sbjct: 564 RPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHR 623
Query: 425 IFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDVRPNDQTFLAVLSACAHSGL 604
F + KDIISW MIS Y G+ I++F M S + P+ +LS+ ++S
Sbjct: 624 SFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMR 683
Query: 605 VDEGKSLFHKM---KEYSLAPTLKHYACMVDLYGRSGYLDEAE 724
V E K+ FH + + Y+L +++ ++ +Y + G+L AE
Sbjct: 684 VFEAKA-FHGLIIRRHYTLDQMVQN--ALLSMYCKFGFLKLAE 723
>ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|222856525|gb|EEE94072.1|
predicted protein [Populus trichocarpa]
Length = 733
Score = 393 bits (1009), Expect = e-107
Identities = 180/320 (56%), Positives = 248/320 (77%)
Frame = +2
Query: 20 IHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQDIITWNSLISSYSDNGNC 199
+HC +IK + E V+I NSLI+MYGK G L+ A ++F +D++TWN+LISSY+ +G+
Sbjct: 413 VHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQRDVVTWNTLISSYTHSGHY 472
Query: 200 LKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSVATSL 379
+AI+ FD MIS L PN+ATL ++LSAC + +LEKGK +H YI E G +VS+ T+L
Sbjct: 473 AEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTAL 532
Query: 380 VDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDVRPND 559
VDMYAKCGQ++ ++E+F+S+ EKD+ISWNVMIS YG+HG SA+E+FQ+M++S+V+PN
Sbjct: 533 VDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNA 592
Query: 560 QTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAEALVLS 739
TFL++LSAC H+G VDEGK LF +M+ YS+ P LKH+ACM DL GRSG L EAE LV S
Sbjct: 593 ITFLSLLSACTHAGYVDEGKQLFDRMQYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQS 652
Query: 740 MPCTPDGGIWGSLLTSCKLHNNPAMGMKIAKHAIEADPENGGYYILVSDFYSSMGMWEDV 919
MP PDGG+WG+LL++CK+HN +G+++AK AIE+DPEN GYYI++S+ Y SMG W++
Sbjct: 653 MPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEA 712
Query: 920 GQVRKTMKDRGVRKTVGWSA 979
+ R+ MK+RG+ K GWSA
Sbjct: 713 ERARELMKERGIGKRAGWSA 732
Score = 111 bits (278), Expect = 4e-22
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 56/328 (17%)
Frame = +2
Query: 11 GQSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHA-SQDIITWNSLI----- 172
G+ +H +KT + + +SL++MY KCG + EA F +D+ +W S+I
Sbjct: 254 GRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCAR 313
Query: 173 -----------------SSYSDN----------GNCL---KAISFFDVMISRCLKPNTAT 262
Y D GN + + +F +++ R +
Sbjct: 314 FGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTV 373
Query: 263 LAVLLSACAQIAALEKGKK--------------------IHDYILEEGLTYDVSVATSLV 382
LLS + L +K +H YI++ + DVS+A SL+
Sbjct: 374 NNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLI 433
Query: 383 DMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDVRPNDQ 562
DMY K G + +A ++F +++D+++WN +IS Y G+ AI +F M + PN
Sbjct: 434 DMYGKGGNLSIAWKMF-CRTQRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSA 492
Query: 563 TFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAEALVLSM 742
T + VLSAC H +++GK + +KE + +VD+Y + G L+++ L SM
Sbjct: 493 TLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSM 552
Query: 743 PCTPDGGIWGSLLTSCKLHNNPAMGMKI 826
D W +++ LH + M++
Sbjct: 553 K-EKDVISWNVMISGYGLHGDANSAMEV 579
Score = 108 bits (270), Expect = 3e-21
Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Frame = +2
Query: 23 HCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQ-DIITWNSLISSYSDNGNC 199
H +I T V I + LI++Y K + +F +Q D WNS+I S+ NGN
Sbjct: 52 HALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNY 111
Query: 200 LKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVS-VATS 376
KA F+ M PN T+ ++++ CA++ LE+GK IH + + GL + S V +S
Sbjct: 112 FKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSS 171
Query: 377 LVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKE---SDV 547
V MYAKCG ++ A +FD I +D++SW ++ Y + + +E M+
Sbjct: 172 FVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGE 231
Query: 548 RPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEA 721
+ N +T AC + G + G+ L + L + + ++ +Y + G ++EA
Sbjct: 232 KVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEA 289
Score = 103 bits (256), Expect = 1e-19
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 8/248 (3%)
Frame = +2
Query: 11 GQSIHCCMIKT-MMLEKVTIVNSLINMYGKCGKLTEAERLFHH-ASQDIITWNSLISSYS 184
G+ IH + K+ + E + +S + MY KCG + +A +F +D+++W +L+ Y
Sbjct: 149 GKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYV 208
Query: 185 DNGNCLKAISFFDVMI---SRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTY 355
N + K + M K N+ TL AC + A+ G+ +H ++ GL
Sbjct: 209 HNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGC 268
Query: 356 DVSVATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMK 535
V +SL+ MY+KCG ++ A F + +KD+ SW +I G+ + +F M+
Sbjct: 269 SQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQ 328
Query: 536 ESDVRPNDQTFLAVLSACAHSGLVDEGKSLFHKM---KEYSLAPTLKHYACMVDLYGRSG 706
DV P+ +L +S +V EGK+ FH + + Y L T+ + ++ +Y + G
Sbjct: 329 VDDVYPDGIVVSCILLGFGNSMMVREGKA-FHGLIVRRNYVLDDTVNN--ALLSMYCKFG 385
Query: 707 YLDEAEAL 730
L+ AE L
Sbjct: 386 TLNPAEKL 393
Score = 58.2 bits (139), Expect = 5e-06
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Frame = +2
Query: 290 QIAALEKGKKIHDYILEEGLTYDVSVATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNV 469
Q L+ K H I+ G +V +++ L+ +YA + + +FDS ++KD WN
Sbjct: 41 QTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNS 100
Query: 470 MISCYGMHGYGKSAIEIFQRMKESDVRPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYS 649
+I + +G A + + +M+ + PN T +++ CA ++EGK + + +
Sbjct: 101 IIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSG 160
Query: 650 L-APTLKHYACMVDLYGRSGYLDEAEAL 730
L A + V +Y + G +++A +
Sbjct: 161 LFAENSAVGSSFVYMYAKCGVMEDASLM 188
>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 758
Score = 389 bits (998), Expect = e-105
Identities = 182/326 (55%), Positives = 252/326 (77%), Gaps = 1/326 (0%)
Frame = +2
Query: 2 IGFGQSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQDIITWNSLISSY 181
I G+SIHC +IK + E +++ NSLI MYGKC K+ + R+F+ + +D+I WN+LIS++
Sbjct: 431 INLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRSERDVILWNALISAH 490
Query: 182 SDNGNCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDV 361
+ +AIS FD+MI PNTATL V+LSAC+ +A LEKG+++H YI E+G ++
Sbjct: 491 IHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNL 550
Query: 362 SVATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKES 541
+ T+LVDMYAKCGQ++ ++E+FDS+ EKD+I WN MIS YGM+GY +SAIEIF M+ES
Sbjct: 551 PLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEES 610
Query: 542 DVRPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEA 721
+V+PN+ TFL++LSACAH+GLV+EGK++F KM+ YS+ P LKHY CMVDL GRS L+EA
Sbjct: 611 NVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPNLKHYTCMVDLLGRSCNLEEA 670
Query: 722 EALVLSMPCTPDGGIWGSLLTSCKLHNNPAMGMKIAKHAIEADPENGGYYILVSDFYSSM 901
E LVLSMP PDGG+WG+LL++CK HN MG++I K+AI+++PEN GYYI+V++ YSS+
Sbjct: 671 EELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSI 730
Query: 902 GMWEDVGQVRKTMKDR-GVRKTVGWS 976
G W++ VR+TMKDR + K GWS
Sbjct: 731 GRWDEAENVRRTMKDRCSMGKKAGWS 756
Score = 132 bits (333), Expect = 2e-28
Identities = 74/244 (30%), Positives = 129/244 (52%)
Frame = +2
Query: 11 GQSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQDIITWNSLISSYSDN 190
G++ H +I+ + NSL++MY K G L+ AERLF + I WN +I Y
Sbjct: 334 GKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQGSIEYWNFMIVGYGRI 393
Query: 191 GNCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSVA 370
G +K I F M ++ + + +++C Q+ + G+ IH +++ + +SV
Sbjct: 394 GKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVT 453
Query: 371 TSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDVR 550
SL++MY KC +++++ IF+ SE+D+I WN +IS + + + AI +F M D
Sbjct: 454 NSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQN 512
Query: 551 PNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAEAL 730
PN T + VLSAC+H +++G+ L + E L +VD+Y + G L+++ +
Sbjct: 513 PNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREV 572
Query: 731 VLSM 742
SM
Sbjct: 573 FDSM 576
Score = 100 bits (248), Expect = 1e-18
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Frame = +2
Query: 11 GQSIHCCMIKTMML-EKVTIVNSLINMYGKCGKLTEAERLFHHAS-QDIITWNSLISSYS 184
G ++H K E + +S +++Y +C ++ +A ++F +D++ W +L+ Y
Sbjct: 128 GMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYV 187
Query: 185 DNGNC---LKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTY 355
NG L+ IS + KPN TL AC + L G+ +H +++ G+
Sbjct: 188 QNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGC 247
Query: 356 DVSVATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMK 535
+ + +S++ MY KCG A + F + KD++SW MI Y G + F M
Sbjct: 248 LLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEML 307
Query: 536 ESDVRPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLD 715
E+ V P+ +LS +S V GK+ + AP ++ +Y + G L
Sbjct: 308 ENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLS 367
Query: 716 EAEAL 730
AE L
Sbjct: 368 FAERL 372
Score = 83.6 bits (205), Expect = 1e-13
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 5/238 (2%)
Frame = +2
Query: 23 HCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHAS-QDIITWNSLISSYSDNGNC 199
H + T I LI++Y T + LFH +D WNS + +
Sbjct: 31 HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 90
Query: 200 LKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVS-VATS 376
+ +SF+ +M S + PN T ++ S+ A + G +H + G + S V +S
Sbjct: 91 PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSS 150
Query: 377 LVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQ---RMKESDV 547
V +Y++C +++ A ++FD I +D+++W ++ Y +G + +E R+ +
Sbjct: 151 FVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQ 210
Query: 548 RPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEA 721
+PN +T AC + G + G+ L + + + L + ++ +Y + G EA
Sbjct: 211 KPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREA 268
>ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 383 bits (983), Expect = e-104
Identities = 175/327 (53%), Positives = 251/327 (76%), Gaps = 1/327 (0%)
Frame = +2
Query: 2 IGFGQSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQ-DIITWNSLISS 178
I G+SIHC IK ++E V++ NSL++MYGK G +T R+FH Q D+I+WN+LISS
Sbjct: 427 INIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISS 486
Query: 179 YSDNGNCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYD 358
Y +G +AI FD M+ + PN T ++LSACA +A+L++G+KIH YI E G +
Sbjct: 487 YKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESN 546
Query: 359 VSVATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKE 538
+++ T+L+DMYAKCG+++ ++++F+S E+D+I WNVMIS YGMHG+ +SA+EIFQ M+E
Sbjct: 547 ITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEE 606
Query: 539 SDVRPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDE 718
S+++PN QTFL++LSAC H+G V EG+ LF +M++Y + P+LKHYA ++DL GRSG L+
Sbjct: 607 SNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEA 666
Query: 719 AEALVLSMPCTPDGGIWGSLLTSCKLHNNPAMGMKIAKHAIEADPENGGYYILVSDFYSS 898
AEALVLSMP TPDG +WGSLL++CK+HN +G+++A++AIE+DP+N GYYI++SD YS
Sbjct: 667 AEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSC 726
Query: 899 MGMWEDVGQVRKTMKDRGVRKTVGWSA 979
+G W++V +VR MK RGV K GWSA
Sbjct: 727 LGRWDEVEKVRDMMKKRGVEKRAGWSA 753
Score = 157 bits (396), Expect = 7e-36
Identities = 86/272 (31%), Positives = 144/272 (52%)
Frame = +2
Query: 11 GQSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQDIITWNSLISSYSDN 190
G++ H ++K N+L++MY K G L A ++FH + W+++I YS+
Sbjct: 330 GKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYSNM 389
Query: 191 GNCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSVA 370
G K ISF M+ +P+ +L ++S+C+Q+ A+ G+ IH Y ++ + +VSVA
Sbjct: 390 GQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVA 449
Query: 371 TSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDVR 550
SL+DMY K G + IF ++D+ISWN +IS Y G AI +F +M + V
Sbjct: 450 NSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVY 509
Query: 551 PNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAEAL 730
PN T + VLSACAH +DEG+ + +KE + ++D+Y + G L+ + L
Sbjct: 510 PNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKL 569
Query: 731 VLSMPCTPDGGIWGSLLTSCKLHNNPAMGMKI 826
S D +W ++++ +H + M+I
Sbjct: 570 FNSTE-ERDVILWNVMISNYGMHGHVESAMEI 600
Score = 101 bits (252), Expect = 4e-19
Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Frame = +2
Query: 11 GQSIHCCMIKT-MMLEKVTIVNSLINMYGKCGKLTEAERLFHHAS-QDIITWNSLISSYS 184
G +IH K + + I +S I MY KCG + A +F + +D++TW +LI Y
Sbjct: 127 GMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYV 186
Query: 185 DNGNCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVS 364
N + + M PN T+ AC + AL +GK +H L+ G
Sbjct: 187 QNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEV 246
Query: 365 VATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESD 544
V ++++ MY++CG + A F + +KD+ISW +I+ + G + +F M+ S+
Sbjct: 247 VKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASE 306
Query: 545 VRPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAE 724
+ P++ +L +S + EGK+ ++ + A + + ++ +Y + G+L A
Sbjct: 307 IIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTAN 366
Query: 725 AL 730
+
Sbjct: 367 KI 368
Score = 93.6 bits (231), Expect = 1e-16
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Frame = +2
Query: 11 GQSIHCCMIKTMMLEKVTIVNSLINMYGKCGKLTEAERLFHHASQ-DIITWNSLISSYSD 187
G+ +H +K L + +++++MY +CG EA R F Q D+I+W S+I+ +S
Sbjct: 229 GKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSK 288
Query: 188 NGNCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGLTYDVSV 367
G + + F M + + P+ ++ +L + +GK H IL++
Sbjct: 289 FGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGIT 348
Query: 368 ATSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDV 547
+L+ MY K G + A +IF S K W+ MI Y G + I + M
Sbjct: 349 HNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGR 407
Query: 548 RPNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEAEA 727
P+ + ++V+S+C+ G ++ G+S+ + S+ + ++D+YG+SG++ A
Sbjct: 408 EPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHV-TATW 466
Query: 728 LVLSMPCTPDGGIWGSLLTSCK 793
+ D W +L++S K
Sbjct: 467 RIFHRTLQRDVISWNTLISSYK 488
Score = 92.4 bits (228), Expect = 2e-16
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 4/237 (1%)
Frame = +2
Query: 23 HCCMIKTMMLEKVTIVNSLINMYG---KCGKLTEAERLFHHASQDIITWNSLISSYSDNG 193
H +I T V L+ Y K T RL H S+DI WNS+I S+ NG
Sbjct: 30 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIH--SKDIFLWNSIIQSHFSNG 87
Query: 194 NCLKAISFFDVMISRCLKPNTATLAVLLSACAQIAALEKGKKIHDYILEEGL-TYDVSVA 370
+ +A F+ M + PN T+ +++S CA++ G IH + GL + ++
Sbjct: 88 DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 147
Query: 371 TSLVDMYAKCGQIDMAKEIFDSISEKDIISWNVMISCYGMHGYGKSAIEIFQRMKESDVR 550
+S + MY+KCG ++ A +F I+ KD+++W +I Y + ++ M
Sbjct: 148 SSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 207
Query: 551 PNDQTFLAVLSACAHSGLVDEGKSLFHKMKEYSLAPTLKHYACMVDLYGRSGYLDEA 721
PN +T + AC + EGK L + + ++ +Y R G +EA
Sbjct: 208 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEA 264