BLASTX nr result

ID: Salvia21_contig00006736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00006736
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   198   6e-56
ref|NP_566579.1| 50S ribosomal protein L3-2 [Arabidopsis thalian...   186   7e-51
gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidop...   186   8e-51
ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arab...   185   1e-50
gb|ABK95213.1| unknown [Populus trichocarpa]                          186   1e-49

>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis
           vinifera] gi|297736812|emb|CBI26013.3| unnamed protein
           product [Vitis vinifera]
          Length = 307

 Score =  198 bits (503), Expect(2) = 6e-56
 Identities = 92/105 (87%), Positives = 98/105 (93%)
 Frame = -2

Query: 530 GMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGHMGVEQRTVKNVWIYKIDPARNLLW 351
           GMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPG MG +QRTVKNVW+YKIDP RNL+W
Sbjct: 187 GMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYKIDPTRNLMW 246

Query: 350 VRGQVPGATGNFVFIKDAVYKKPNIALLPFPTYFAAEDEDPTQLE 216
           VRGQVPGA GNFVFIKDAVYKKP+ ++LPFPTYF AEDEDPT LE
Sbjct: 247 VRGQVPGAEGNFVFIKDAVYKKPDASILPFPTYFPAEDEDPTVLE 291



 Score = 44.7 bits (104), Expect(2) = 6e-56
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = -1

Query: 165 EDPTQLEPIVADYGDIDPFMAAD 97
           EDPT LEPIVAD GDIDPFM AD
Sbjct: 285 EDPTVLEPIVADLGDIDPFMVAD 307


>ref|NP_566579.1| 50S ribosomal protein L3-2 [Arabidopsis thaliana]
           gi|42559534|sp|Q9LRN8.1|RK3B_ARATH RecName: Full=50S
           ribosomal protein L3-2, chloroplastic; Flags: Precursor
           gi|11994685|dbj|BAB02923.1| 50S ribosomal protein L3
           [Arabidopsis thaliana] gi|332642436|gb|AEE75957.1| 50S
           ribosomal protein L3-2 [Arabidopsis thaliana]
          Length = 324

 Score =  186 bits (471), Expect(2) = 7e-51
 Identities = 87/105 (82%), Positives = 95/105 (90%)
 Frame = -2

Query: 530 GMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGHMGVEQRTVKNVWIYKIDPARNLLW 351
           GMPASHGASLSHRS GSTGQRDAPGKVFKG+KM G MG +QRTVKNVW+YKIDPARNL+W
Sbjct: 204 GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYKIDPARNLMW 263

Query: 350 VRGQVPGATGNFVFIKDAVYKKPNIALLPFPTYFAAEDEDPTQLE 216
           VRGQVPGA GNFVFIKDA  KKP+I+ LPFPTY A EDEDP++LE
Sbjct: 264 VRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTYLAPEDEDPSELE 308



 Score = 40.0 bits (92), Expect(2) = 7e-51
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = -1

Query: 165 EDPTQLEPIVADYGDIDPFMAAD 97
           EDP++LEP+VAD G++DPFM A+
Sbjct: 302 EDPSELEPLVADLGEVDPFMLAE 324


>gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidopsis thaliana]
          Length = 134

 Score =  186 bits (471), Expect(2) = 8e-51
 Identities = 87/105 (82%), Positives = 95/105 (90%)
 Frame = -2

Query: 530 GMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGHMGVEQRTVKNVWIYKIDPARNLLW 351
           GMPASHGASLSHRS GSTGQRDAPGKVFKG+KM G MG +QRTVKNVW+YKIDPARNL+W
Sbjct: 14  GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYKIDPARNLMW 73

Query: 350 VRGQVPGATGNFVFIKDAVYKKPNIALLPFPTYFAAEDEDPTQLE 216
           VRGQVPGA GNFVFIKDA  KKP+I+ LPFPTY A EDEDP++LE
Sbjct: 74  VRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTYLAPEDEDPSELE 118



 Score = 40.0 bits (92), Expect(2) = 8e-51
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = -1

Query: 165 EDPTQLEPIVADYGDIDPFMAAD 97
           EDP++LEP+VAD G++DPFM A+
Sbjct: 112 EDPSELEPLVADLGEVDPFMLAE 134


>ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp.
           lyrata] gi|297331053|gb|EFH61472.1| hypothetical protein
           ARALYDRAFT_479224 [Arabidopsis lyrata subsp. lyrata]
          Length = 323

 Score =  185 bits (470), Expect(2) = 1e-50
 Identities = 87/105 (82%), Positives = 94/105 (89%)
 Frame = -2

Query: 530 GMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGHMGVEQRTVKNVWIYKIDPARNLLW 351
           GMP SHGASLSHRS GSTGQRDAPGKVFKGKKM G MG +QRTVKNVW+YKIDPARNL+W
Sbjct: 203 GMPGSHGASLSHRSGGSTGQRDAPGKVFKGKKMAGRMGADQRTVKNVWVYKIDPARNLMW 262

Query: 350 VRGQVPGATGNFVFIKDAVYKKPNIALLPFPTYFAAEDEDPTQLE 216
           VRGQVPGA GNFVFIKDA  KKP+I+ LPFPTY A EDEDP++LE
Sbjct: 263 VRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTYLAPEDEDPSELE 307



 Score = 40.0 bits (92), Expect(2) = 1e-50
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = -1

Query: 165 EDPTQLEPIVADYGDIDPFMAAD 97
           EDP++LEP+VAD G++DPFM A+
Sbjct: 301 EDPSELEPLVADLGEVDPFMLAE 323


>gb|ABK95213.1| unknown [Populus trichocarpa]
          Length = 315

 Score =  186 bits (472), Expect(2) = 1e-49
 Identities = 86/100 (86%), Positives = 93/100 (93%)
 Frame = -2

Query: 530 GMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGHMGVEQRTVKNVWIYKIDPARNLLW 351
           G PASHGASLSHRSIGSTGQRDAPGKVFKGKKMPG MG  QRTVKNVW+YKIDPARNL+W
Sbjct: 197 GGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYKIDPARNLMW 256

Query: 350 VRGQVPGATGNFVFIKDAVYKKPNIALLPFPTYFAAEDED 231
           V+GQVPGA GNFVFIKD+VYKKP+I +LPFPTYF AED+D
Sbjct: 257 VKGQVPGAEGNFVFIKDSVYKKPDIQMLPFPTYFGAEDDD 296



 Score = 35.4 bits (80), Expect(2) = 1e-49
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -1

Query: 165 EDPTQLEPIVADYGDIDPFMAAD 97
           ED    EP+VAD G++DPFM AD
Sbjct: 293 EDDDNAEPLVADLGEVDPFMVAD 315


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