BLASTX nr result

ID: Salvia21_contig00004556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004556
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   209   2e-52
ref|XP_002533251.1| chlorophyll A/B binding protein, putative [R...   209   2e-52
gb|AAQ54512.1| chlorophyll a/b-binding protein type I [Malus x d...   209   2e-52
emb|CAL07974.1| chlorophyll a/b-binding protein, photosystem I [...   207   6e-52
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers...   206   1e-51

>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
           PREDICTED: chlorophyll a-b binding protein 6A,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/125 (81%), Positives = 109/125 (87%), Gaps = 2/125 (1%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASVTFGTNAT--TSRFTMSADWMPGEPRPPYLDGSA 176
           +MSCG+A  A  PSVLSSSKSKFA  V     A   +SRF+MSA+WMPG+PRPPYLDGSA
Sbjct: 6   LMSCGIATTAF-PSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSA 64

Query: 177 PGDFGFDPLGLGAVPENLERFKESEIFHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVP 356
           PGDFGFDPLGLG VPENLERFKESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAAVP
Sbjct: 65  PGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVP 124

Query: 357 GGQAT 371
           GGQAT
Sbjct: 125 GGQAT 129


>ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223526931|gb|EEF29136.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 244

 Score =  209 bits (531), Expect = 2e-52
 Identities = 101/124 (81%), Positives = 110/124 (88%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASVTFG-TNATTSRFTMSADWMPGEPRPPYLDGSAP 179
           +MSCG+A A   PS+LSSSKSKFA+SV     N ++SR TMSADWMPG+PRPPYLDGSAP
Sbjct: 6   LMSCGIATAF--PSLLSSSKSKFASSVPLPCVNGSSSRITMSADWMPGQPRPPYLDGSAP 63

Query: 180 GDFGFDPLGLGAVPENLERFKESEIFHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPG 359
           GDFGFDPL LG VPENLERFKESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAA+PG
Sbjct: 64  GDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPG 123

Query: 360 GQAT 371
           GQAT
Sbjct: 124 GQAT 127


>gb|AAQ54512.1| chlorophyll a/b-binding protein type I [Malus x domestica]
          Length = 147

 Score =  209 bits (531), Expect = 2e-52
 Identities = 104/127 (81%), Positives = 111/127 (87%), Gaps = 4/127 (3%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASV----TFGTNATTSRFTMSADWMPGEPRPPYLDG 170
           +MSCG+A  A  PSVLSSSKSKFA S     + G NA+ SRF+MSA+WMPGEPRPPYLDG
Sbjct: 6   LMSCGIATTAF-PSVLSSSKSKFATSAVQLPSIGANAS-SRFSMSAEWMPGEPRPPYLDG 63

Query: 171 SAPGDFGFDPLGLGAVPENLERFKESEIFHCRWAMLAVPGILVPEALGLGNWVKAQEWAA 350
           SAPGDFGFDPL LG VPENLERFKESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAA
Sbjct: 64  SAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAA 123

Query: 351 VPGGQAT 371
           VPGGQAT
Sbjct: 124 VPGGQAT 130


>emb|CAL07974.1| chlorophyll a/b-binding protein, photosystem I [Platanus x
           acerifolia]
          Length = 167

 Score =  207 bits (528), Expect = 6e-52
 Identities = 105/126 (83%), Positives = 112/126 (88%), Gaps = 3/126 (2%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASVTFG---TNATTSRFTMSADWMPGEPRPPYLDGS 173
           + SCGVAA  V PS+LSSSKSKFA +V      +NA+T RFTMSADWMPG+PRPPYLDGS
Sbjct: 6   LRSCGVAA--VFPSLLSSSKSKFATAVALPGACSNAST-RFTMSADWMPGQPRPPYLDGS 62

Query: 174 APGDFGFDPLGLGAVPENLERFKESEIFHCRWAMLAVPGILVPEALGLGNWVKAQEWAAV 353
           APGDFGFDPL LGAVPENLERFKESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAAV
Sbjct: 63  APGDFGFDPLLLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAV 122

Query: 354 PGGQAT 371
           PGGQAT
Sbjct: 123 PGGQAT 128


>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
           gi|225895|prf||1402358A photosystem I protein CAB
          Length = 246

 Score =  206 bits (525), Expect = 1e-51
 Identities = 98/125 (78%), Positives = 109/125 (87%), Gaps = 2/125 (1%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASVTFGTNATTS--RFTMSADWMPGEPRPPYLDGSA 176
           +MSCG+ A  VCPS LSS+KSKFAA++     AT S  RF+MSADWMPG+PRP YLDGSA
Sbjct: 6   LMSCGIPA--VCPSFLSSTKSKFAAAMPVSVGATNSMSRFSMSADWMPGQPRPSYLDGSA 63

Query: 177 PGDFGFDPLGLGAVPENLERFKESEIFHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVP 356
           PGDFGFDPLGLG VP NLER+KESE+ HCRWAMLAVPGI+VPEALGLGNWVKAQEWAA+P
Sbjct: 64  PGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIP 123

Query: 357 GGQAT 371
           GGQAT
Sbjct: 124 GGQAT 128


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