BLASTX nr result

ID: Salvia21_contig00004465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004465
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [S...   135   2e-29
gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]        124   3e-26
gb|AFW65850.1| WW domain-binding protein 11 [Zea mays]                124   3e-26
gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays]        124   3e-26
ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotei...   121   2e-25

>ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [Solanum lycopersicum]
           gi|62751087|dbj|BAD95791.1| similar to u1 small nuclear
           ribonucleoprotein C [Solanum lycopersicum]
          Length = 197

 Score =  135 bits (340), Expect = 2e-29
 Identities = 60/63 (95%), Positives = 62/63 (98%)
 Frame = +3

Query: 84  MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLGA 263
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHK NVR+YYQQ+EAQLNQSLIDQKVKEHLGA
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGA 60

Query: 264 FRP 272
           FRP
Sbjct: 61  FRP 63


>gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
          Length = 322

 Score =  124 bits (311), Expect = 3e-26
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +3

Query: 69  SSNSAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVK 248
           SS +AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q  QSLIDQ++K
Sbjct: 189 SSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIK 248

Query: 249 EHLG 260
           EHLG
Sbjct: 249 EHLG 252


>gb|AFW65850.1| WW domain-binding protein 11 [Zea mays]
          Length = 421

 Score =  124 bits (311), Expect = 3e-26
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +3

Query: 69  SSNSAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVK 248
           SS +AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q  QSLIDQ++K
Sbjct: 189 SSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIK 248

Query: 249 EHLG 260
           EHLG
Sbjct: 249 EHLG 252


>gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
          Length = 345

 Score =  124 bits (311), Expect = 3e-26
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +3

Query: 69  SSNSAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVK 248
           SS +AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q  QSLIDQ++K
Sbjct: 189 SSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIK 248

Query: 249 EHLG 260
           EHLG
Sbjct: 249 EHLG 252


>ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
           sativus] gi|449491514|ref|XP_004158922.1| PREDICTED: U1
           small nuclear ribonucleoprotein C-like [Cucumis sativus]
          Length = 197

 Score =  121 bits (304), Expect = 2e-25
 Identities = 53/59 (89%), Positives = 56/59 (94%)
 Frame = +3

Query: 84  MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG 260
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ+E Q  QSLIDQ++KEHLG
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLG 59


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