BLASTX nr result

ID: Salvia21_contig00002688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00002688
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote...   113   2e-23
ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   112   3e-23
ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote...   103   1e-20
ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|NP_192844.2| Single-stranded DNA-binding protein [Arabidopsi...   101   5e-20

>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
           protein product [Vitis vinifera]
          Length = 208

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/100 (59%), Positives = 70/100 (70%)
 Frame = -1

Query: 339 MNSLAPKFRNLLRLPNFSTAACLQRSSKVFFSTEPFDSGNTPDKEGPDAPEIEDDDFLTE 160
           M+SLA   R L   P  S    +Q++SK ++ST  FD G+   K G    E  D+D +TE
Sbjct: 1   MSSLANLARFLRVRPTTSLVVGVQKNSKAWYSTVSFDGGDGDGKNGEG--EESDNDLVTE 58

Query: 159 KPELQLQGVDPRKGWNFRGVHRAIICGKVGQAPIQKILRN 40
           KP LQLQGVDPRKGW FRGVH+AIICGKVGQAP+QKILRN
Sbjct: 59  KPNLQLQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRN 98


>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/105 (59%), Positives = 71/105 (67%), Gaps = 5/105 (4%)
 Frame = -1

Query: 339 MNSLAPKFRNLLRLPN-----FSTAACLQRSSKVFFSTEPFDSGNTPDKEGPDAPEIEDD 175
           M+SLA KF   LR+ +      S    LQRS K  +STE F   N   K   +  + E D
Sbjct: 1   MSSLAVKFAKFLRVSSPAATTSSPVVGLQRSFKTLYSTESFSGENDVGKN--NELDEEFD 58

Query: 174 DFLTEKPELQLQGVDPRKGWNFRGVHRAIICGKVGQAPIQKILRN 40
           DFL EKPELQ+QGVDPRKGW FRGVH+AIICGKVGQAP+QKILRN
Sbjct: 59  DFLGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRN 103


>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 217

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 7/107 (6%)
 Frame = -1

Query: 339 MNSLAPKFRNLLRLPNFSTAAC--LQRSSKVFFSTEPFDSGNT---PDKEGP--DAPEIE 181
           MNS+A +    LRL   ++ +   + RS   ++ST      N    PD + P  +A + E
Sbjct: 1   MNSMAVRLAKHLRLSALTSFSLGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEALDEE 60

Query: 180 DDDFLTEKPELQLQGVDPRKGWNFRGVHRAIICGKVGQAPIQKILRN 40
            DDFL EKPELQLQGVDP+KGW FRGVH+AIICGKVGQAP+QKILRN
Sbjct: 61  FDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRN 107


>ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|222857871|gb|EEE95418.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  102 bits (255), Expect = 2e-20
 Identities = 58/106 (54%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
 Frame = -1

Query: 339 MNSLAPKFRNLLRLPN------FSTAACLQRSSKVFFSTEPFDSGNTPDKEGPDAPEIED 178
           M+SL  +F  LLR+P+       S    LQRS +  +ST  F+S N   K   D  E E 
Sbjct: 1   MSSLVLRFAKLLRVPSPVIMPTSSLGVGLQRSLRSCYSTVSFNSDNEEGKN--DKVEEEF 58

Query: 177 DDFLTEKPELQLQGVDPRKGWNFRGVHRAIICGKVGQAPIQKILRN 40
           DD L ++ E + QGVDPRKGW FRGVHRAIICGKVGQAP+QKILRN
Sbjct: 59  DDLLGDRRESRFQGVDPRKGWEFRGVHRAIICGKVGQAPVQKILRN 104


>ref|NP_192844.2| Single-stranded DNA-binding protein [Arabidopsis thaliana]
           gi|38258307|sp|Q84J78.1|SSB_ARATH RecName:
           Full=Single-stranded DNA-binding protein, mitochondrial;
           Flags: Precursor gi|28393531|gb|AAO42186.1| unknown
           protein [Arabidopsis thaliana]
           gi|28827408|gb|AAO50548.1| unknown protein [Arabidopsis
           thaliana] gi|34556071|emb|CAE46651.1| single-stranded
           DNA binding protein [Arabidopsis thaliana]
           gi|332657567|gb|AEE82967.1| Single-stranded DNA-binding
           protein [Arabidopsis thaliana]
          Length = 201

 Score =  101 bits (252), Expect = 5e-20
 Identities = 57/101 (56%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = -1

Query: 339 MNSLAPKFRNLLRLPNFSTAAC-LQRSSKVFFSTEPFDSGNTPDKEGPDAPEIEDDDFLT 163
           MNSLA +   +LR  + S  A   +R SK +FST P D G   D E          + +T
Sbjct: 1   MNSLAIRVSKVLRSSSISPLAISAERGSKSWFSTGPIDEGVEEDFE----------ENVT 50

Query: 162 EKPELQLQGVDPRKGWNFRGVHRAIICGKVGQAPIQKILRN 40
           E+PELQ  GVDPRKGW FRGVHRAIICGKVGQAP+QKILRN
Sbjct: 51  ERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRN 91


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