BLASTX nr result

ID: Salvia21_contig00002076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00002076
         (2784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-bi...    76   4e-11
ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|...    75   1e-10
gb|AFW86040.1| hypothetical protein ZEAMMB73_854699 [Zea mays]         69   5e-09
ref|NP_001141317.1| uncharacterized protein LOC100273408 [Zea ma...    69   5e-09
ref|XP_002511743.1| Spastin, putative [Ricinus communis] gi|2235...    68   1e-08

>gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-binding protein [Nicotiana
            tabacum]
          Length = 537

 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = -3

Query: 1075 NAPTSQKLVQEPAGGHDAKLVEMINSVIVDCSLSVKWEDITGPEMAKQALTEMVILPKAK 896
            N+ +S K  QE A G+D KLV+MINSVIVD S SVKWEDI G E AKQAL EMVILP  +
Sbjct: 229  NSISSHKPSQESANGYDPKLVDMINSVIVDRSPSVKWEDIAGLEKAKQALLEMVILPTKR 288

Query: 895  SNL 887
             +L
Sbjct: 289  KDL 291


>ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|296089089|emb|CBI38792.3|
            unnamed protein product [Vitis vinifera]
          Length = 491

 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = -3

Query: 1063 SQKLVQEPAGGHDAKLVEMINSVIVDCSLSVKWEDITGPEMAKQALTEMVILPKAKSNL 887
            S K VQE   G+DAKLVEMIN+VIVD S SVKW+D+ G E AKQAL EMVILP  + +L
Sbjct: 187  SSKPVQESGHGYDAKLVEMINTVIVDRSPSVKWDDVAGLEKAKQALLEMVILPTKRKDL 245


>gb|AFW86040.1| hypothetical protein ZEAMMB73_854699 [Zea mays]
          Length = 396

 Score = 69.3 bits (168), Expect = 5e-09
 Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
 Frame = -3

Query: 1081 GNNAPTSQKL-------VQEPAGGHDAKLVEMINSVIVDCSLSVKWEDITGPEMAKQALT 923
            G  A T QK+       VQ+  G +D KLVEMIN+ IVD S SVKW+D+ G + AKQAL 
Sbjct: 172  GGQASTHQKIGSGASRPVQKAGGNYDDKLVEMINTTIVDRSPSVKWDDVAGLDKAKQALM 231

Query: 922  EMVILPKAKSNL 887
            EMVILP  + +L
Sbjct: 232  EMVILPSKRRDL 243


>ref|NP_001141317.1| uncharacterized protein LOC100273408 [Zea mays]
            gi|194703948|gb|ACF86058.1| unknown [Zea mays]
            gi|413953392|gb|AFW86041.1| hypothetical protein
            ZEAMMB73_854699 [Zea mays]
          Length = 490

 Score = 69.3 bits (168), Expect = 5e-09
 Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
 Frame = -3

Query: 1081 GNNAPTSQKL-------VQEPAGGHDAKLVEMINSVIVDCSLSVKWEDITGPEMAKQALT 923
            G  A T QK+       VQ+  G +D KLVEMIN+ IVD S SVKW+D+ G + AKQAL 
Sbjct: 172  GGQASTHQKIGSGASRPVQKAGGNYDDKLVEMINTTIVDRSPSVKWDDVAGLDKAKQALM 231

Query: 922  EMVILPKAKSNL 887
            EMVILP  + +L
Sbjct: 232  EMVILPSKRRDL 243


>ref|XP_002511743.1| Spastin, putative [Ricinus communis] gi|223548923|gb|EEF50412.1|
            Spastin, putative [Ricinus communis]
          Length = 518

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -3

Query: 1057 KLVQEPAGGHDAKLVEMINSVIVDCSLSVKWEDITGPEMAKQALTEMVILPKAKSNL 887
            K  QE   G++AKLVEMIN+ IVD S SVKW+D+ G E AKQ+L EMVILP  + +L
Sbjct: 215  KSAQESGNGYEAKLVEMINTAIVDRSPSVKWDDVAGLEKAKQSLMEMVILPTKRRDL 271


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