BLASTX nr result

ID: Salvia21_contig00001596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00001596
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [So...    58   4e-06

>emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
          Length = 602

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 43/105 (40%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
 Frame = +1

Query: 1   WKKTVSKTKRQALMMNN----NPAAGVSIPTSPATDADVGAMSDKNDDSGKKIK-XXXXX 165
           WKK VSKTKRQALM+NN    + +A  S  T+   +AD    S+KND   K  K      
Sbjct: 472 WKKMVSKTKRQALMINNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKPKKGDVGEE 531

Query: 166 XXXXXXXMPAASFPPVEIEIEKDEXXXXXXXXXRDHDQEDNGRGN 300
                   PA  FPPV  EIEKDE            DQE+ G G+
Sbjct: 532 DVEIEDDEPATHFPPV--EIEKDEGG--------GRDQENGGGGS 566


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