BLASTX nr result

ID: Salvia21_contig00000848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00000848
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93470.1| unknown [Populus trichocarpa]                          102   6e-20
ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|1...   102   6e-20
ref|XP_002529063.1| 60S acidic ribosomal protein P2, putative [R...   100   2e-19
gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanu...    99   7e-19
gb|AFW81220.1| acidic ribosomal protein P2a-4 [Zea mays]               99   7e-19

>gb|ABK93470.1| unknown [Populus trichocarpa]
          Length = 114

 Score =  102 bits (255), Expect = 6e-20
 Identities = 61/114 (53%), Positives = 66/114 (57%)
 Frame = -3

Query: 620 MKVVAAYLLAVLGGNASPSAEDVKGILSSVGADCDEERIELLLSQVAGKDITELIAAGRE 441
           MKVVAAYLLAVLGGN  P+AED+K IL SVGAD D++RIELLLS V GKDITELIA+GRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 440 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 279
           KL                                        ESDDDMGF LFD
Sbjct: 61  KLASVPSGGGVAVASGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


>ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|118481307|gb|ABK92597.1|
           unknown [Populus trichocarpa]
           gi|118485702|gb|ABK94701.1| unknown [Populus
           trichocarpa] gi|222837577|gb|EEE75942.1| predicted
           protein [Populus trichocarpa]
          Length = 114

 Score =  102 bits (255), Expect = 6e-20
 Identities = 61/114 (53%), Positives = 66/114 (57%)
 Frame = -3

Query: 620 MKVVAAYLLAVLGGNASPSAEDVKGILSSVGADCDEERIELLLSQVAGKDITELIAAGRE 441
           MKVVAAYLLAVLGGN  P+AED+K IL SVGAD D++RIELLLS V GKDITELIA+GRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 440 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 279
           KL                                        ESDDDMGF LFD
Sbjct: 61  KLASVPSGGGVAVAAGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


>ref|XP_002529063.1| 60S acidic ribosomal protein P2, putative [Ricinus communis]
           gi|223531475|gb|EEF33307.1| 60S acidic ribosomal protein
           P2, putative [Ricinus communis]
          Length = 113

 Score =  100 bits (250), Expect = 2e-19
 Identities = 63/114 (55%), Positives = 66/114 (57%)
 Frame = -3

Query: 620 MKVVAAYLLAVLGGNASPSAEDVKGILSSVGADCDEERIELLLSQVAGKDITELIAAGRE 441
           MK+VAAYLLAVLGGN SPSAED+K IL SVG D DE+RI LLLSQV GKDITELIAAGRE
Sbjct: 1   MKIVAAYLLAVLGGNTSPSAEDLKEILGSVGIDADEDRIGLLLSQVKGKDITELIAAGRE 60

Query: 440 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 279
           KL                                        ESDDDMGF LFD
Sbjct: 61  KL-ASVPSGGGVAVAAAAAPAAGGAAAPAAEAKKEEKVEEKEESDDDMGFSLFD 113


>gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanum tuberosum]
          Length = 115

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 61/115 (53%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
 Frame = -3

Query: 620 MKVVAAYLLAVLGGNASPSAEDVKGILSSVGADCDEERIELLLSQVAGKDITELIAAGRE 441
           MKV+A+YLLAVLGGN SPSA D+K IL+SVGA+ D++RIELLLSQV GKDITELIAAGRE
Sbjct: 1   MKVIASYLLAVLGGNTSPSAADLKKILASVGAEADDDRIELLLSQVKGKDITELIAAGRE 60

Query: 440 KL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 279
           KL                                         ESDDDMGF LFD
Sbjct: 61  KLASVPAGGGGGVAVAVSGGGGGGAAAPAAEEKKVEKKVEEKEESDDDMGFSLFD 115


>gb|AFW81220.1| acidic ribosomal protein P2a-4 [Zea mays]
          Length = 120

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 62/116 (53%), Positives = 67/116 (57%)
 Frame = -3

Query: 626 SDMKVVAAYLLAVLGGNASPSAEDVKGILSSVGADCDEERIELLLSQVAGKDITELIAAG 447
           S MKVVAAYLLAVL GNASPSAED+ GIL SVG + D ER+ELLLSQ++GKDITELIAAG
Sbjct: 7   SRMKVVAAYLLAVLAGNASPSAEDLTGILESVGCEVDNERMELLLSQLSGKDITELIAAG 66

Query: 446 REKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFGLFD 279
           REK                                         ESDDDMGF LFD
Sbjct: 67  REKF--ASVPCGGGGVAVAAGAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 120


Top