BLASTX nr result

ID: Salvia21_contig00000087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00000087
         (1936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g...   488   e-135
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]       484   e-134
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...   483   e-134
gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]           482   e-133
ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote...   481   e-133

>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] gi|40804404|gb|AAR91698.1|
            DNA-binding protein [Solanum lycopersicum]
          Length = 428

 Score =  488 bits (1257), Expect = e-135
 Identities = 242/347 (69%), Positives = 276/347 (79%), Gaps = 1/347 (0%)
 Frame = +1

Query: 472  MMYNQHYVPYYHPXXXXXXXXXXXXXXXXXXXXXIQNGAEDNKTIWIGDLQQWMDEGYLQ 651
            MMY Q Y+PYYH                       QN +EDN+TIWIGDLQQWMDEGYL 
Sbjct: 50   MMYGQQYMPYYHQQHQQMIQIQ-------------QNASEDNRTIWIGDLQQWMDEGYLH 96

Query: 652  SCFSQSGEVVSAKIIRNKQTGHSERYGFIEFNSHEAAEKVLQSFNGITMPNTEQPFRLNW 831
            +CF+Q+GEV+S K+IRNKQTG SERYGFIEFN+HEAAEKVLQS+NG  MPN EQPFRLNW
Sbjct: 97   TCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSYNGTMMPNAEQPFRLNW 156

Query: 832  AAFSTGDRRPNTG-GADIGSDLSIFVGDLASDVTDAMLTDTFASRYPSVKGAKVVVDANS 1008
            +AFS+G++R + G GA  GSDLSIFVGDLASDVTD ML DTF+SRYPSVKGAKVV+D+N+
Sbjct: 157  SAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNT 216

Query: 1009 GRSKGYGFVRFGDENERTRAMNEMNGVYCSSRPMRIGVATPKKTSPQQQQYSSQAVVLAG 1188
            GRSKGYGFVRF DE+ER+RAM EMNG+YCSSR MRIGVATPKK SP  QQY  QAV+LAG
Sbjct: 217  GRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSP-MQQYFPQAVILAG 275

Query: 1189 GGGYANGVVPQGQSDSDSANTTIFVGGLDSDVTDEELRQSFTPFGEVLSVKIPAGKGCGF 1368
            G           Q+DSD +NTT+FVGGLDS+VTDEELRQSF+ FG V+SVKIPAGKGCGF
Sbjct: 276  GHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAGKGCGF 335

Query: 1369 VQYANRSNAEDAIQRLNGTVIGKQTVRLSWGRTMGNKQSRMDANGQW 1509
            VQ++ RS AEDAI++LNGTVIG QTVRLSWGR   NKQ R D+  QW
Sbjct: 336  VQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPANKQFRTDSGSQW 382


>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score =  484 bits (1247), Expect = e-134
 Identities = 246/347 (70%), Positives = 278/347 (80%), Gaps = 1/347 (0%)
 Frame = +1

Query: 472  MMYNQHYVPYYHPXXXXXXXXXXXXXXXXXXXXXIQNGAEDNKTIWIGDLQQWMDEGYLQ 651
            MMY Q Y+PYY                       IQ+ +EDNKTIWIGDLQQWMDE YL 
Sbjct: 103  MMYGQQYMPYYQQHQQQQQKMQQSPTQ-------IQSSSEDNKTIWIGDLQQWMDESYLH 155

Query: 652  SCFSQSGEVVSAKIIRNKQTGHSERYGFIEFNSHEAAEKVLQSFNGITMPNTEQPFRLNW 831
            SCFSQ+GEV+S KIIRNKQTG SERYGF+EFN+H AAEKVLQS+NG  MPN EQPFRLNW
Sbjct: 156  SCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNAEQPFRLNW 215

Query: 832  AAFSTGDRRPNTGGADIGSDLSIFVGDLASDVTDAMLTDTFASRYPSVKGAKVVVDANSG 1011
            A FSTG++R     A+ GSD SIFVGDLASDVTD ML DTFASRYPS+KGAKVVVDAN+G
Sbjct: 216  AGFSTGEKR-----AETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTG 270

Query: 1012 RSKGYGFVRFGDENERTRAMNEMNGVYCSSRPMRIGVATPKKTSPQQQQYSSQAVVLAGG 1191
             SKGYGFVRFGDE+ER+RAM EMNGVYCSSR MRIGVATPKK S  QQQYSSQAV+L+GG
Sbjct: 271  HSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPS-AQQQYSSQAVILSGG 329

Query: 1192 GGYANGVVPQG-QSDSDSANTTIFVGGLDSDVTDEELRQSFTPFGEVLSVKIPAGKGCGF 1368
               +NG    G QSD D++NTTIFVGGLDSDVTDEELRQSF  FGEV+SVKIPAGKGCGF
Sbjct: 330  YA-SNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGF 388

Query: 1369 VQYANRSNAEDAIQRLNGTVIGKQTVRLSWGRTMGNKQSRMDANGQW 1509
            VQ+++RS+A++AIQ+L+G +IGKQ VRLSWGR+  NKQ R D+  QW
Sbjct: 389  VQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRADSGSQW 435


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
            Short=Poly(A)-binding protein RBP47; AltName:
            Full=RNA-binding protein 47; Short=NplRBP47
            gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
            [Nicotiana plumbaginifolia]
          Length = 428

 Score =  483 bits (1243), Expect = e-134
 Identities = 245/347 (70%), Positives = 278/347 (80%), Gaps = 1/347 (0%)
 Frame = +1

Query: 472  MMYNQHYVPYYHPXXXXXXXXXXXXXXXXXXXXXIQNGAEDNKTIWIGDLQQWMDEGYLQ 651
            MMY Q Y+PYY                       IQ+ +EDNKTIWIGDLQQWMDE YL 
Sbjct: 50   MMYGQQYMPYYQQHQQQQKMQQSPTQ--------IQSSSEDNKTIWIGDLQQWMDESYLH 101

Query: 652  SCFSQSGEVVSAKIIRNKQTGHSERYGFIEFNSHEAAEKVLQSFNGITMPNTEQPFRLNW 831
            SCFSQ+GEV+S KIIRNKQTG SERYGF+EFN+H AAEKVLQS+NG  MPNTEQPFRLNW
Sbjct: 102  SCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNW 161

Query: 832  AAFSTGDRRPNTGGADIGSDLSIFVGDLASDVTDAMLTDTFASRYPSVKGAKVVVDANSG 1011
            A FSTG++R     A+ GSD SIFVGDLASDVTD ML DTFASRYPS+KGAKVVVDAN+G
Sbjct: 162  AGFSTGEKR-----AETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTG 216

Query: 1012 RSKGYGFVRFGDENERTRAMNEMNGVYCSSRPMRIGVATPKKTSPQQQQYSSQAVVLAGG 1191
             SKGYGFVRFGDE+ER+RAM EMNGVYCSSR MRIGVATPKK S   +QYSSQAV+L+GG
Sbjct: 217  HSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPS-AHEQYSSQAVILSGG 275

Query: 1192 GGYANGVVPQG-QSDSDSANTTIFVGGLDSDVTDEELRQSFTPFGEVLSVKIPAGKGCGF 1368
               +NG    G QSD DS+NTTIFVGGLDS+VTDEELRQSF  FGEV+SVKIPAGKGCGF
Sbjct: 276  YA-SNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGF 334

Query: 1369 VQYANRSNAEDAIQRLNGTVIGKQTVRLSWGRTMGNKQSRMDANGQW 1509
            VQ+++RS+A++AIQ+L+G +IGKQ VRLSWGR+  NKQ R D+  QW
Sbjct: 335  VQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQW 381


>gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
          Length = 423

 Score =  482 bits (1241), Expect = e-133
 Identities = 244/348 (70%), Positives = 276/348 (79%), Gaps = 2/348 (0%)
 Frame = +1

Query: 472  MMYNQHYVPYYHPXXXXXXXXXXXXXXXXXXXXXIQNGAEDNKTIWIGDLQQWMDEGYLQ 651
            MMY Q Y+PYYH                       QNG+EDN+TIWIGDLQQWMDEGYL 
Sbjct: 50   MMYGQQYMPYYHQQQQHMIQIQ-------------QNGSEDNRTIWIGDLQQWMDEGYLH 96

Query: 652  SCFSQSGEVVSAKIIRNKQTGHSERYGFIEFNSHEAAEKVLQSFNGITMPNTEQPFRLNW 831
            +CF+Q+GEV+S K+IRNKQTG SERYGFIEFN+HEAAEKVLQS+NG  MPN EQPFRLNW
Sbjct: 97   TCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSYNGTMMPNAEQPFRLNW 156

Query: 832  AAFSTGDRRPNTG-GADIGSDLSIFVGDLASDVTDAMLTDTFASRYPSVKGAKVVVDANS 1008
            +AFSTG++R + G  A  GSDLSIFVGDLASDVTD ML DTF+SRYPSVKGAKVV+D+N+
Sbjct: 157  SAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNT 216

Query: 1009 GRSKGYGFVRFGDENERTRAMNEMNGVYCSSRPMRIGVATPKKTSPQQQQYSSQAVVLAG 1188
            GRSKGYGFVRF DE+ER+RAM EMNG+YCSSR MRIGVATPKK S   QQYSSQ      
Sbjct: 217  GRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPS-AMQQYSSQ------ 269

Query: 1189 GGGYANGVVPQ-GQSDSDSANTTIFVGGLDSDVTDEELRQSFTPFGEVLSVKIPAGKGCG 1365
            GG  +NG   Q  Q+DSD +NTT+FVGGLDSDVTDEELRQSF+ FG V+SVKIPAGKGCG
Sbjct: 270  GGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCG 329

Query: 1366 FVQYANRSNAEDAIQRLNGTVIGKQTVRLSWGRTMGNKQSRMDANGQW 1509
            FVQ++ RS AEDAI++LNGTVIG QTVRLSWGR   NKQ R D+  QW
Sbjct: 330  FVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANKQFRTDSGSQW 377


>ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 416

 Score =  481 bits (1237), Expect = e-133
 Identities = 242/351 (68%), Positives = 277/351 (78%), Gaps = 3/351 (0%)
 Frame = +1

Query: 466  HNMMYNQHYVPYYHPXXXXXXXXXXXXXXXXXXXXXIQNGAEDNKTIWIGDLQQWMDEGY 645
            H MMY QHY+PY+HP                     +    ++ KT+W+GDL QWMD+ Y
Sbjct: 44   HQMMYPQHYMPYHHPQPPQQYQNQPPQHQ-------MHGSTDEIKTLWVGDLHQWMDDNY 96

Query: 646  LQSCFSQSGEVV--SAKIIRNKQTGHSERYGFIEFNSHEAAEKVLQSFNGITMPNTEQPF 819
            L++CF  +GEV   S KIIRNKQTG SE YGF+EF S   AEK+L S+NG  MPNTEQPF
Sbjct: 97   LRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKILHSYNGTLMPNTEQPF 156

Query: 820  RLNWAAFSTGDRRPNTGGADIGSDLSIFVGDLASDVTDAMLTDTFASRYPSVKGAKVVVD 999
            RLNWA FSTGDRR      D GSDLSIFVGDLASDVTDA+L +TFA+RYPSVKGAKVV D
Sbjct: 157  RLNWATFSTGDRR-----TDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTD 211

Query: 1000 ANSGRSKGYGFVRFGDENERTRAMNEMNGVYCSSRPMRIGVATPKKTSPQQQQYSSQAVV 1179
            +N+GRSKGYGFVRFGDENER+RAMNEMNG+YCSSRPMRIGVATPKK S  QQQYSSQA+V
Sbjct: 212  SNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALV 271

Query: 1180 LAGGGGYANGVVPQG-QSDSDSANTTIFVGGLDSDVTDEELRQSFTPFGEVLSVKIPAGK 1356
            LAGG   +NG V QG Q++ DS NTTIFVGGLDS+VTDE+LRQSF+ FGEV+SVKIP GK
Sbjct: 272  LAGGNA-SNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGK 330

Query: 1357 GCGFVQYANRSNAEDAIQRLNGTVIGKQTVRLSWGRTMGNKQSRMDANGQW 1509
            GCGFVQ+ANR++AEDA+QRLNGTVIGKQTVRLSWGR   +KQ R D+N QW
Sbjct: 331  GCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQW 381


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