BLASTX nr result
ID: Rheum21_contig00040639
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040639
(295 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG22121.1| polyprotein [Solanum melongena] 143 2e-32
ref|WP_010863442.1| hypothetical protein, partial [Plesiomonas s... 135 6e-30
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 134 2e-29
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 133 3e-29
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 130 1e-28
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 129 3e-28
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 129 5e-28
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 129 5e-28
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 128 9e-28
emb|CAN81354.1| hypothetical protein VITISV_003396 [Vitis vinifera] 127 2e-27
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 127 2e-27
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 127 2e-27
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 127 2e-27
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 125 6e-27
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 124 1e-26
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 121 9e-26
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 121 9e-26
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 120 2e-25
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 118 9e-25
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 118 9e-25
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 143 bits (361), Expect = 2e-32
Identities = 67/98 (68%), Positives = 84/98 (85%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FM Q YTRS YDHCVY K+ +GS++YLLLYVDDMLIA+ ++ EI++LK +LS EFEMK
Sbjct: 55 FMQDQRYTRSKYDHCVYFHKLQNGSYVYLLLYVDDMLIAAKSQFEIDRLKAQLSKEFEMK 114
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKFG 1
DLG+AKKILGMEI RDR +G++CL+QK YLKKVL++FG
Sbjct: 115 DLGEAKKILGMEISRDRQRGKLCLTQKQYLKKVLQRFG 152
>ref|WP_010863442.1| hypothetical protein, partial [Plesiomonas shigelloides]
gi|499066173|gb|EON88725.1| hypothetical protein
PLESHI_09099, partial [Plesiomonas shigelloides 302-73]
Length = 114
Score = 135 bits (340), Expect = 6e-30
Identities = 67/94 (71%), Positives = 77/94 (81%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FM+GQ YTRS YD CVY +K+ DG +IYLLLYVDDMLIAS +++EIE LK LS EFEMK
Sbjct: 21 FMMGQKYTRSKYDDCVYFRKLQDGFYIYLLLYVDDMLIASKSQNEIETLKFHLSKEFEMK 80
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVL 13
D G+AKKILGMEI RDR GR+CL+QK YL KVL
Sbjct: 81 DRGEAKKILGMEISRDRKLGRLCLTQKDYLSKVL 114
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 134 bits (336), Expect = 2e-29
Identities = 69/97 (71%), Positives = 77/97 (79%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FM G YTRS YD CVY KK + ++IYLLLYVDDMLIASANKSE+ +LK LS EFEMK
Sbjct: 983 FMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMK 1042
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLGDAKKILGMEI RDR G + LSQ+ Y+KKVLR F
Sbjct: 1043 DLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSF 1079
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 133 bits (334), Expect = 3e-29
Identities = 69/97 (71%), Positives = 82/97 (84%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML Q + RS+YD+CVY KV DGS IYLLLYVDDMLIA+ +KSEIEKLK +LS+EFEMK
Sbjct: 725 FMLSQKFRRSNYDNCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMK 783
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R+R G++ LSQK Y++KVLR+F
Sbjct: 784 DLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRF 820
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 130 bits (328), Expect = 1e-28
Identities = 68/97 (70%), Positives = 80/97 (82%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FM Q + RS+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEIEKLK +LS+EFEMK
Sbjct: 862 FMFSQKFRRSNYDSCVY-LKVVDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMK 920
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R+R G++ LSQK Y++KVLR+F
Sbjct: 921 DLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRF 957
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 129 bits (325), Expect = 3e-28
Identities = 68/97 (70%), Positives = 80/97 (82%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML Q + S+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEIEKLK +LS+EFEMK
Sbjct: 955 FMLSQKFRISNYDSCVY-LKVVDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMK 1013
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R+R G++ LSQK Y++KVLR+F
Sbjct: 1014 DLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRF 1050
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 129 bits (323), Expect = 5e-28
Identities = 68/97 (70%), Positives = 79/97 (81%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML Q + RS+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEI KLK +LS+EF MK
Sbjct: 1018 FMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMK 1076
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R+R G++ LSQK Y+KKVLR+F
Sbjct: 1077 DLGAAKKILGMEITRERHSGKLYLSQKGYIKKVLRRF 1113
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 129 bits (323), Expect = 5e-28
Identities = 68/97 (70%), Positives = 79/97 (81%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML Q + RS+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEI KLK +LS+EF MK
Sbjct: 1018 FMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMK 1076
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R+R G++ LSQK Y+KKVLR+F
Sbjct: 1077 DLGAAKKILGMEITRERHSGKLYLSQKGYIKKVLRRF 1113
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 128 bits (321), Expect = 9e-28
Identities = 67/97 (69%), Positives = 79/97 (81%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML Q + RS+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEI KLK +LS+EFEMK
Sbjct: 892 FMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMK 950
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R+R G++ LSQK Y++KVL +F
Sbjct: 951 DLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRF 987
>emb|CAN81354.1| hypothetical protein VITISV_003396 [Vitis vinifera]
Length = 252
Score = 127 bits (319), Expect = 2e-27
Identities = 66/101 (65%), Positives = 76/101 (75%), Gaps = 3/101 (2%)
Frame = -2
Query: 294 FMLGQA---YTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEF 124
FM+G Y RS YD+CVYHKK+ DGSFIYLLLYVDDMLIA N EI K +L EF
Sbjct: 68 FMIGNESNDYHRSEYDNCVYHKKLFDGSFIYLLLYVDDMLIAYKNMFEINMSKTQLQREF 127
Query: 123 EMKDLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKFG 1
EMKDLG AKKILGMEI RD+ G++ LSQK Y++KVL +FG
Sbjct: 128 EMKDLGTAKKILGMEIHRDQKVGKLYLSQKNYIEKVLERFG 168
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 127 bits (319), Expect = 2e-27
Identities = 67/97 (69%), Positives = 79/97 (81%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML Q + RS+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEI KLK +LS+EFEMK
Sbjct: 741 FMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMK 799
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R+R ++ LSQK Y++KVLR+F
Sbjct: 800 DLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRF 836
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 127 bits (319), Expect = 2e-27
Identities = 67/97 (69%), Positives = 79/97 (81%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML Q + RS+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEI KLK +LS+EFEMK
Sbjct: 909 FMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMK 967
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R+R ++ LSQK Y++KVLR+F
Sbjct: 968 DLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRF 1004
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 127 bits (318), Expect = 2e-27
Identities = 62/97 (63%), Positives = 79/97 (81%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FM+GQ Y +S YD C+Y + +GSFIYLLLYVDDMLIAS +KS I+KLK +LS EF+MK
Sbjct: 332 FMIGQNYCKSQYDDCIYFQNFQNGSFIYLLLYVDDMLIASRDKSLIKKLKTELSNEFDMK 391
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
+LG AKKILGMEI+RDR G++ LSQ+ Y+K+VL +F
Sbjct: 392 ELGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVLDRF 428
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 125 bits (314), Expect = 6e-27
Identities = 67/97 (69%), Positives = 78/97 (80%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML Q + RS+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEI KLK +LS+EFEMK
Sbjct: 1190 FMLSQKFRRSNYDSCVY-LKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMK 1248
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI R R ++ LSQK Y++KVLR+F
Sbjct: 1249 DLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRF 1285
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 124 bits (311), Expect = 1e-26
Identities = 61/98 (62%), Positives = 80/98 (81%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
+M+ YTRS YD CVY+ +++D SFIYL+LYVDDMLIA+ K +I+KLK LSAEFEMK
Sbjct: 958 YMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMK 1017
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKFG 1
DLG A+KILGMEI RDR + ++ LSQ++Y++KVL +FG
Sbjct: 1018 DLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFG 1055
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 121 bits (304), Expect = 9e-26
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FM+ Y RS Y+ CVY ++++DGS+IYLLLYVDDMLIAS NK +I+KLK L+ EFEMK
Sbjct: 990 FMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEMK 1049
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKFG 1
DLG A+KILGMEI R+R +G + LSQ Y+ VLR FG
Sbjct: 1050 DLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFG 1087
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 121 bits (304), Expect = 9e-26
Identities = 60/97 (61%), Positives = 76/97 (78%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FM+ + R+ YD CVY K + DGSFIYLLLYVDDMLIA+ N++EI KLK LS+EFEMK
Sbjct: 1282 FMVSHEFMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMK 1341
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI RDR G + +SQ+ Y++K+++ F
Sbjct: 1342 DLGAAKKILGMEIWRDRDAGLLYVSQQKYIEKLMQAF 1378
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 120 bits (301), Expect = 2e-25
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = -2
Query: 276 YTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMKDLGDAK 97
+ RS+YD CVY KV DGS IYLLLYVDDMLIA+ +KSEI KLK +LS+EFEMKDLG AK
Sbjct: 795 FRRSNYDSCVY-PKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAK 853
Query: 96 KILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
KILG+EI ++R G++ LSQK Y++KVLR+F
Sbjct: 854 KILGIEITKERHSGKLYLSQKGYIEKVLRRF 884
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 118 bits (295), Expect = 9e-25
Identities = 64/97 (65%), Positives = 75/97 (77%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML ++ RS YD CVY K V+ GS IYLLLYVDDMLIA+ +K EI KLK LS+EF+MK
Sbjct: 984 FMLSHSFKRSKYDSCVYIKHVN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMK 1042
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI RDR G + LSQ Y+KKVL++F
Sbjct: 1043 DLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRF 1079
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 118 bits (295), Expect = 9e-25
Identities = 64/97 (65%), Positives = 75/97 (77%)
Frame = -2
Query: 294 FMLGQAYTRSHYDHCVYHKKVSDGSFIYLLLYVDDMLIASANKSEIEKLKCKLSAEFEMK 115
FML ++ RS YD CVY K V+ GS IYLLLYVDDMLIA+ +K EI KLK LS+EF+MK
Sbjct: 984 FMLSHSFKRSKYDSCVYIKHVN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMK 1042
Query: 114 DLGDAKKILGMEIQRDRVKGRVCLSQKAYLKKVLRKF 4
DLG AKKILGMEI RDR G + LSQ Y+KKVL++F
Sbjct: 1043 DLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRF 1079