BLASTX nr result
ID: Rheum21_contig00040586
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040586
(296 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 135 6e-30
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 135 7e-30
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 131 1e-28
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 130 2e-28
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 130 2e-28
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 130 2e-28
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 130 2e-28
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 130 2e-28
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 130 2e-28
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 130 2e-28
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 130 2e-28
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 130 2e-28
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 129 3e-28
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 129 3e-28
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 129 3e-28
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 129 4e-28
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 129 5e-28
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 128 7e-28
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 128 7e-28
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 128 9e-28
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 135 bits (340), Expect = 6e-30
Identities = 59/98 (60%), Positives = 75/98 (76%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LL G ++ K+ FC+ CVMGKQ +V F G HTT G+L+Y+HSD+WGP+ +S G RY+V
Sbjct: 768 LLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIHSDLWGPSPVESHSGCRYYV 827
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
FIDD+SRKVWVYF+K K EVFGKFK WK VE +TG+
Sbjct: 828 TFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGK 865
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 135 bits (339), Expect = 7e-30
Identities = 60/99 (60%), Positives = 80/99 (80%), Gaps = 2/99 (2%)
Frame = -3
Query: 291 LDGLKSCKMGFCKFCVMGKQSKVSFK--TGQHTTKGLLDYVHSDVWGPTREQSIGGSRYF 118
LDG+ S + FC++C +GKQ++VSF + ++ +KG+LDY+H+DVWGP+ S GG+RYF
Sbjct: 416 LDGVMSAALEFCRYCTLGKQTRVSFNLSSSENKSKGVLDYIHTDVWGPSATISKGGARYF 475
Query: 117 VIFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
V FIDD+SRKVW++FMK K+EVF KFK WKAEV NQTGR
Sbjct: 476 VSFIDDFSRKVWIFFMKTKNEVFTKFKEWKAEVGNQTGR 514
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 131 bits (329), Expect = 1e-28
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 456 LLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMM 515
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 516 TIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTER 553
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 130 bits (327), Expect = 2e-28
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R++S GG+RY +
Sbjct: 395 LLDGQNIGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVHSDLWGPARKRSFGGARYMM 454
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK E F FK WK VE QT R
Sbjct: 455 TIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQTER 492
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 130 bits (326), Expect = 2e-28
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 663 LLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMM 722
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 723 TIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 760
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 130 bits (326), Expect = 2e-28
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 417 LLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMM 476
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 477 TIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 514
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 130 bits (326), Expect = 2e-28
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 288 LLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIM 347
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 348 TIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 385
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 130 bits (326), Expect = 2e-28
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 456 LLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMM 515
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 516 TIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 553
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 130 bits (326), Expect = 2e-28
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 288 LLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIM 347
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 348 TIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 385
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 130 bits (326), Expect = 2e-28
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 471 LLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMM 530
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 531 TIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 568
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 130 bits (326), Expect = 2e-28
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 365 LLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMM 424
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 425 TIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTER 462
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 130 bits (326), Expect = 2e-28
Identities = 55/96 (57%), Positives = 68/96 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG KM FC+ CV GK +V F T H TKG+LDYVH+D+WGP+R+ +GG+RY +
Sbjct: 449 LLDGCTQGKMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHTDLWGPSRKAYLGGARYML 508
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQT 7
IDDYSRKVW YF+KHK + F FK WK +E QT
Sbjct: 509 TIIDDYSRKVWPYFLKHKDDTFAAFKEWKVRIERQT 544
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 129 bits (325), Expect = 3e-28
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LL G S K+ FC+ C+ GK +V F T HTTKG LDYVH+D+WGP+++ S+GG+RY +
Sbjct: 448 LLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYML 507
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
IDDYSRKVW YF+KHK + F FK WK +E QT R
Sbjct: 508 TIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTER 545
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 129 bits (325), Expect = 3e-28
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LL G S K+ FC+ C+ GK +V F T HTTKG LDYVH+D+WGP+++ S+GG+RY +
Sbjct: 448 LLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYML 507
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
IDDYSRKVW YF+KHK + F FK WK +E QT R
Sbjct: 508 TIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTER 545
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 129 bits (325), Expect = 3e-28
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LL G S K+ FC+ C+ GK +V F T HTTKG LDYVH+D+WGP+++ S+GG+RY +
Sbjct: 450 LLKGYTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYML 509
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
IDDYSRKVW YF+KHK + F FK WK +E QT R
Sbjct: 510 TIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTER 547
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 129 bits (324), Expect = 4e-28
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LL G S K+ FC+ C+ GK +V F T HTTKG LDYVH+D+WGP+++ S+GG+RY +
Sbjct: 448 LLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYML 507
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
IDDYSRKVW YF+KHK + F FK WK +E QT R
Sbjct: 508 TVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTER 545
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 129 bits (323), Expect = 5e-28
Identities = 55/96 (57%), Positives = 68/96 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG M FC+ CV GK +V F T H TKG+LDYVH+D+WGP+R+ S+GG+RY +
Sbjct: 449 LLDGCTQGNMKFCERCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYML 508
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQT 7
IDDYSRKVW YF+KHK + F FK WK +E QT
Sbjct: 509 TIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQT 544
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 128 bits (322), Expect = 7e-28
Identities = 55/98 (56%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 273 LLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMM 332
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
++DYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 333 TIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTER 370
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 128 bits (322), Expect = 7e-28
Identities = 55/98 (56%), Positives = 69/98 (70%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP R+ S GG+RY +
Sbjct: 441 LLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMM 500
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
++DYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 501 TIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTER 538
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 128 bits (321), Expect = 9e-28
Identities = 55/98 (56%), Positives = 68/98 (69%)
Frame = -3
Query: 294 LLDGLKSCKMGFCKFCVMGKQSKVSFKTGQHTTKGLLDYVHSDVWGPTREQSIGGSRYFV 115
LLDG K+ FC+ C+ GK +V F T HTT+G+LDYVHSD+WGP + S GG+RY +
Sbjct: 428 LLDGQSIRKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPAHKTSFGGARYMM 487
Query: 114 IFIDDYSRKVWVYFMKHKSEVFGKFKIWKAEVENQTGR 1
+DDYSRKVW YF+KHK + F FK WK VE QT R
Sbjct: 488 TIVDDYSRKVWPYFLKHKYQAFDGFKEWKTMVERQTER 525