BLASTX nr result
ID: Rheum21_contig00040581
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040581
(304 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 118 7e-25
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 117 1e-24
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 117 1e-24
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 117 1e-24
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 117 2e-24
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 117 2e-24
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 116 3e-24
emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera] 116 4e-24
emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera] 115 8e-24
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 114 1e-23
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 114 1e-23
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 113 2e-23
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 113 2e-23
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 112 5e-23
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 111 9e-23
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 111 9e-23
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 111 9e-23
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 110 1e-22
emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera] 110 1e-22
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 110 1e-22
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 118 bits (296), Expect = 7e-25
Identities = 55/96 (57%), Positives = 66/96 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EA TA +LINRSPSS + FKTP+E WTG+ + HL+ FGCTAY K KL+PRA+
Sbjct: 579 WAEAAETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAV 638
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNE 300
KC+ LGYP+G KGY + G K I SR VTFNE
Sbjct: 639 KCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNE 674
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 117 bits (294), Expect = 1e-24
Identities = 55/97 (56%), Positives = 68/97 (70%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV TAAYL+NRSPS+ I FKTP+E+W+G+ N S L+ FGC AYA + GKL+PRA+
Sbjct: 720 WAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAM 779
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGY G KGY + K I SR VTF+ES
Sbjct: 780 KCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDES 816
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 117 bits (294), Expect = 1e-24
Identities = 55/97 (56%), Positives = 68/97 (70%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV TAAYL+NRSPS+ I FKTP+E+W+G+ N S L+ FGC AYA + GKL+PRA+
Sbjct: 933 WAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAM 992
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGY G KGY + K I SR VTF+ES
Sbjct: 993 KCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDES 1029
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 117 bits (294), Expect = 1e-24
Identities = 56/97 (57%), Positives = 70/97 (72%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EA +TA YLINR+P+S IGFK P+E+WTG KP++SHLR FGC+AY + Q K PRA+
Sbjct: 510 WAEATSTAVYLINRTPNSFIGFKLPEEVWTGTKPDLSHLRRFGCSAYVHVTQDKTSPRAV 569
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
K V +GYP G KGY L + G K TSR+V FNE+
Sbjct: 570 KGVFMGYPCGIKGYRVWLPKEG--KCTTSRNVVFNET 604
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 117 bits (292), Expect = 2e-24
Identities = 58/97 (59%), Positives = 68/97 (70%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+TA YLINRSPS I KTP E+W+G N S LR FGCTAYA + GKL+PRA+
Sbjct: 828 WAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAI 887
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G KGY L P KV+ SR+V F+ES
Sbjct: 888 KCIFLGYPSGVKGYK--LWCPETKKVVISRNVVFHES 922
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 117 bits (292), Expect = 2e-24
Identities = 58/97 (59%), Positives = 68/97 (70%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+TA YLINRSPS I KTP E+W+G N S LR FGCTAYA + GKL+PRA+
Sbjct: 621 WAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAI 680
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G KGY L P KV+ SR+V F+ES
Sbjct: 681 KCIFLGYPSGVKGYK--LWCPETKKVVISRNVVFHES 715
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 116 bits (291), Expect = 3e-24
Identities = 58/99 (58%), Positives = 68/99 (68%)
Frame = +1
Query: 7 SLWGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPR 186
S W EAV TA+YL+NRSPSS IGFKTP+E+W G+ N +LR FGC AY I QGKL+ R
Sbjct: 609 SFWAEAVNTASYLVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAYLHINQGKLEAR 668
Query: 187 ALKCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
ALK V +GYP+G KGY G K I SR V F+ES
Sbjct: 669 ALKGVFVGYPDGVKGYKIWCKDQG--KCIVSRDVVFHES 705
>emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera]
Length = 626
Score = 116 bits (290), Expect = 4e-24
Identities = 52/100 (52%), Positives = 67/100 (67%)
Frame = +1
Query: 1 KSSLWGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQ 180
+ LWG+A+ TA YL+NR PS+ + FKTP E W + +L+ FGC+AYA IKQ KL+
Sbjct: 208 RRQLWGKALKTACYLVNRCPSAAVXFKTPPEAWLRHPADYGNLKIFGCSAYAHIKQDKLK 267
Query: 181 PRALKCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNE 300
PRALKC+ LGY +G KGY I+PG K + S V FNE
Sbjct: 268 PRALKCIFLGYSDGIKGYKLWCIEPGNEKCVISXDVVFNE 307
>emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]
Length = 540
Score = 115 bits (287), Expect = 8e-24
Identities = 52/97 (53%), Positives = 65/97 (67%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
WGEAV T YL+NR+PSS I KT +E+W+G+ N HLR FGCT Y +GKL R++
Sbjct: 308 WGEAVMTTCYLVNRTPSSAIDLKTLEELWSGKPSNYDHLRIFGCTTYVHQSEGKLVTRSI 367
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYPEG KGY + G K+I SR V FNE+
Sbjct: 368 KCIFLGYPEGVKGYKLWNKESSGVKIIISRDVVFNEN 404
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 114 bits (286), Expect = 1e-23
Identities = 57/97 (58%), Positives = 67/97 (69%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+TA YLINRSPS I KTP E+W+G N S LR FGC AYA + GKL+PRA+
Sbjct: 656 WAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCIAYAHVDNGKLEPRAI 715
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G KGY L P KV+ SR+V F+ES
Sbjct: 716 KCIFLGYPSGVKGYK--LWCPETKKVVISRNVVFHES 750
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 114 bits (285), Expect = 1e-23
Identities = 56/97 (57%), Positives = 66/97 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EA +TA YLINRSPS I KTP EMW+G N S L+ FGCTAYA + GKL+PRA+
Sbjct: 560 WAEAASTACYLINRSPSYAIDKKTPIEMWSGSPANYSDLKVFGCTAYAHVDNGKLEPRAI 619
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G K Y L P KV+ SR+V FNE+
Sbjct: 620 KCIFLGYPSGVKAYK--LWCPETQKVVISRNVIFNET 654
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 113 bits (283), Expect = 2e-23
Identities = 56/97 (57%), Positives = 66/97 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+T YLINRSPS KTP E+W+G N S LR FGCTAYA + GKL+PRA+
Sbjct: 656 WAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAI 715
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G KGY L P KV+ SR+V F+ES
Sbjct: 716 KCIFLGYPSGVKGYK--LWCPETKKVVISRNVVFHES 750
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 113 bits (283), Expect = 2e-23
Identities = 56/97 (57%), Positives = 66/97 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+T YLINRSPS KTP E+W+G N S LR FGCTAYA + GKL+PRA+
Sbjct: 656 WAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAI 715
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G KGY L P KV+ SR+V F+ES
Sbjct: 716 KCIFLGYPSGVKGYK--LWCPETKKVVISRNVVFHES 750
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 112 bits (280), Expect = 5e-23
Identities = 56/97 (57%), Positives = 66/97 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+TA YLINRSP I KTP E+W+G N S LR FGCTAYA + GKL+PRA+
Sbjct: 593 WAEAVSTACYLINRSPGYAIDKKTPIEVWSGSPTNYSDLRVFGCTAYAHVDNGKLEPRAI 652
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGY G KGY L P KV+ SR+V F+ES
Sbjct: 653 KCIFLGYASGVKGYK--LWCPETKKVVISRNVVFHES 687
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 111 bits (278), Expect = 9e-23
Identities = 56/97 (57%), Positives = 66/97 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W E V+TA YLINRSPS I KTP E+W+ N S LR FGCTAYA + GKL+PRA+
Sbjct: 403 WVETVSTACYLINRSPSYAIDKKTPIEVWSDSPVNYSDLRVFGCTAYAHVDNGKLEPRAI 462
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G KGY L P KV+ SR+V F+ES
Sbjct: 463 KCIFLGYPSGMKGYK--LWCPKTKKVVISRNVVFHES 497
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 111 bits (278), Expect = 9e-23
Identities = 56/97 (57%), Positives = 66/97 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+TA YLINRSPS I KTP E+W+G N S LR FGCTAYA + GKL+PR +
Sbjct: 530 WAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVI 589
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGY G KGY L P KV+ SR+V F+ES
Sbjct: 590 KCIFLGYLSGVKGYK--LWCPETKKVVISRNVVFHES 624
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 111 bits (278), Expect = 9e-23
Identities = 56/97 (57%), Positives = 63/97 (64%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EA TA YLINRSPS + KTP E+W+G N S LR FGCTAYA + GKL+PRA+
Sbjct: 509 WAEAAKTACYLINRSPSISLNKKTPIEVWSGMPANYSQLRVFGCTAYAHVNNGKLEPRAI 568
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGY G KGY L P K SRSV FNES
Sbjct: 569 KCLFLGYGSGVKGYK--LWNPETNKTFMSRSVVFNES 603
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 110 bits (276), Expect = 1e-22
Identities = 55/97 (56%), Positives = 66/97 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+TA YLINRSPS I KTP ++W+G N S LR FGC AYA + KL+PRA+
Sbjct: 582 WAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAI 641
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G KGY L P KV+ SR+V F+ES
Sbjct: 642 KCIFLGYPSGVKGYK--LWCPETKKVVISRNVVFHES 676
>emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera]
Length = 1017
Score = 110 bits (276), Expect = 1e-22
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = +1
Query: 19 EAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRALKC 198
+AV YL+NR PSS I FKTP+E+W G+ N HLR FGC Y +GKL+PR++KC
Sbjct: 126 KAVMATCYLVNRIPSSAINFKTPEELWFGKPSNYDHLRIFGCITYVHQSEGKLKPRSIKC 185
Query: 199 VMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
+ LGYPEG KGY + G K+I SR V FNE+
Sbjct: 186 IFLGYPEGVKGYRLWYKESPGVKIIISRDVMFNEN 220
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 110 bits (276), Expect = 1e-22
Identities = 55/97 (56%), Positives = 66/97 (68%)
Frame = +1
Query: 13 WGEAVTTAAYLINRSPSSVIGFKTPKEMWTGQKPNISHLRPFGCTAYAQIKQGKLQPRAL 192
W EAV+TA YLINRSPS I KTP ++W+G N S LR FGC AYA + KL+PRA+
Sbjct: 619 WAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAI 678
Query: 193 KCVMLGYPEGFKGYTQLLIQPGGYKVITSRSVTFNES 303
KC+ LGYP G KGY L P KV+ SR+V F+ES
Sbjct: 679 KCIFLGYPSGVKGYK--LWCPETKKVVISRNVVFHES 713