BLASTX nr result
ID: Rheum21_contig00040345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040345
(275 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006446965.1| hypothetical protein CICLE_v10015046mg [Citr... 59 9e-15
ref|XP_006468870.1| PREDICTED: long chain base biosynthesis prot... 59 2e-14
ref|XP_002512864.1| serine palmitoyltransferase, putative [Ricin... 56 4e-13
gb|EXB62852.1| Serine palmitoyltransferase 2 [Morus notabilis] 57 6e-13
gb|EOY02913.1| Long chain base2 isoform 1 [Theobroma cacao] 56 1e-12
gb|EOY02914.1| Long chain base2 isoform 2 [Theobroma cacao] 56 1e-12
ref|XP_006446964.1| hypothetical protein CICLE_v10017847mg [Citr... 56 2e-12
ref|XP_002318160.1| serine palmitoyltransferase family protein [... 55 3e-12
ref|XP_002275468.1| PREDICTED: serine palmitoyltransferase 2 [Vi... 54 8e-12
ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso... 53 1e-11
ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso... 53 1e-11
dbj|BAC55228.1| serine palmitoyltransferase [Lotus japonicus] 52 1e-11
gb|EMJ11162.1| hypothetical protein PRUPE_ppa004890mg [Prunus pe... 55 1e-11
gb|ESW23739.1| hypothetical protein PHAVU_004G071100g [Phaseolus... 52 2e-11
ref|XP_003548027.1| PREDICTED: long chain base biosynthesis prot... 51 2e-11
ref|XP_006290987.1| hypothetical protein CARUB_v10017101mg [Caps... 54 4e-11
dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana] 52 4e-11
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana... 52 4e-11
ref|XP_006404217.1| hypothetical protein EUTSA_v10010322mg [Eutr... 54 5e-11
ref|XP_006364387.1| PREDICTED: long chain base biosynthesis prot... 51 5e-11
>ref|XP_006446965.1| hypothetical protein CICLE_v10015046mg [Citrus clementina]
gi|557549576|gb|ESR60205.1| hypothetical protein
CICLE_v10015046mg [Citrus clementina]
Length = 488
Score = 58.5 bits (140), Expect(2) = 9e-15
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -3
Query: 273 GFPATPLLLSRARFCISASHTKEDLVHALEV 181
GFPATPLLL+RAR CISASHTKEDL+ ALEV
Sbjct: 429 GFPATPLLLARARICISASHTKEDLIEALEV 459
Score = 47.0 bits (110), Expect(2) = 9e-15
Identities = 18/32 (56%), Positives = 29/32 (90%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDDGMIKL 2
+++VIS++GDLVGIKYFP++P++ + GM+KL
Sbjct: 456 ALEVISRIGDLVGIKYFPAEPKKQQQVGMLKL 487
>ref|XP_006468870.1| PREDICTED: long chain base biosynthesis protein 2a-like isoform X1
[Citrus sinensis] gi|568829105|ref|XP_006468871.1|
PREDICTED: long chain base biosynthesis protein 2a-like
isoform X2 [Citrus sinensis]
gi|568829107|ref|XP_006468872.1| PREDICTED: long chain
base biosynthesis protein 2a-like isoform X3 [Citrus
sinensis]
Length = 488
Score = 58.5 bits (140), Expect(2) = 2e-14
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -3
Query: 273 GFPATPLLLSRARFCISASHTKEDLVHALEV 181
GFPATPLLL+RAR CISASHTKEDL+ ALEV
Sbjct: 429 GFPATPLLLARARICISASHTKEDLIEALEV 459
Score = 45.8 bits (107), Expect(2) = 2e-14
Identities = 17/32 (53%), Positives = 29/32 (90%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDDGMIKL 2
+++VI+++GDLVGIKYFP++P++ + GM+KL
Sbjct: 456 ALEVINRIGDLVGIKYFPAEPKKQQQVGMLKL 487
>ref|XP_002512864.1| serine palmitoyltransferase, putative [Ricinus communis]
gi|223547875|gb|EEF49367.1| serine palmitoyltransferase,
putative [Ricinus communis]
Length = 488
Score = 55.8 bits (133), Expect(2) = 4e-13
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHTKEDL+ ALEV
Sbjct: 429 FPATPLLLARARICISASHTKEDLIKALEV 458
Score = 43.9 bits (102), Expect(2) = 4e-13
Identities = 19/33 (57%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDP-REHRDDGMIKL 2
+++VIS+VGDLVGIKYFP++P ++ DD ++KL
Sbjct: 455 ALEVISQVGDLVGIKYFPAEPNKQQEDDKIVKL 487
>gb|EXB62852.1| Serine palmitoyltransferase 2 [Morus notabilis]
Length = 508
Score = 56.6 bits (135), Expect(2) = 6e-13
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHTKEDLV ALEV
Sbjct: 449 FPATPLLLARARICISASHTKEDLVQALEV 478
Score = 42.7 bits (99), Expect(2) = 6e-13
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDDGMIK 5
+++VIS+VGDLVGIKYFP++P + D +K
Sbjct: 475 ALEVISRVGDLVGIKYFPAEPNKQEQDESLK 505
>gb|EOY02913.1| Long chain base2 isoform 1 [Theobroma cacao]
Length = 489
Score = 55.8 bits (133), Expect(2) = 1e-12
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHTKEDL+ ALEV
Sbjct: 431 FPATPLLLARARICISASHTKEDLIKALEV 460
Score = 42.7 bits (99), Expect(2) = 1e-12
Identities = 17/32 (53%), Positives = 27/32 (84%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDDGMIKL 2
+++VIS+VGDLVGIKYFP++P + + + +KL
Sbjct: 457 ALEVISRVGDLVGIKYFPAEPEKQQQEERMKL 488
>gb|EOY02914.1| Long chain base2 isoform 2 [Theobroma cacao]
Length = 454
Score = 55.8 bits (133), Expect(2) = 1e-12
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHTKEDL+ ALEV
Sbjct: 396 FPATPLLLARARICISASHTKEDLIKALEV 425
Score = 42.7 bits (99), Expect(2) = 1e-12
Identities = 17/32 (53%), Positives = 27/32 (84%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDDGMIKL 2
+++VIS+VGDLVGIKYFP++P + + + +KL
Sbjct: 422 ALEVISRVGDLVGIKYFPAEPEKQQQEERMKL 453
>ref|XP_006446964.1| hypothetical protein CICLE_v10017847mg [Citrus clementina]
gi|568829109|ref|XP_006468873.1| PREDICTED: long chain
base biosynthesis protein 2a-like [Citrus sinensis]
gi|557549575|gb|ESR60204.1| hypothetical protein
CICLE_v10017847mg [Citrus clementina]
Length = 489
Score = 55.8 bits (133), Expect(2) = 2e-12
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHTKEDL+ ALEV
Sbjct: 430 FPATPLLLARARICISASHTKEDLIKALEV 459
Score = 42.0 bits (97), Expect(2) = 2e-12
Identities = 16/27 (59%), Positives = 25/27 (92%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDD 17
+++VIS+VGDLVGIKYFP++PR+ ++
Sbjct: 456 ALEVISRVGDLVGIKYFPAEPRKQMEE 482
>ref|XP_002318160.1| serine palmitoyltransferase family protein [Populus trichocarpa]
gi|222858833|gb|EEE96380.1| serine palmitoyltransferase
family protein [Populus trichocarpa]
Length = 489
Score = 55.1 bits (131), Expect(2) = 3e-12
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHTKEDL+ ALEV
Sbjct: 430 FPATPLLLARARICISASHTKEDLLKALEV 459
Score = 42.0 bits (97), Expect(2) = 3e-12
Identities = 18/33 (54%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSD-PREHRDDGMIKL 2
+++VIS+VGDLVGIKYFP++ ++H++ G +KL
Sbjct: 456 ALEVISQVGDLVGIKYFPAESDKQHQEPGALKL 488
>ref|XP_002275468.1| PREDICTED: serine palmitoyltransferase 2 [Vitis vinifera]
gi|296082288|emb|CBI21293.3| unnamed protein product
[Vitis vinifera]
Length = 489
Score = 54.3 bits (129), Expect(2) = 8e-12
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHTKEDL+ LEV
Sbjct: 430 FPATPLLLARARICISASHTKEDLIKGLEV 459
Score = 41.2 bits (95), Expect(2) = 8e-12
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = -2
Query: 94 IQVISKVGDLVGIKYFPSDPREHRDD 17
++VIS+VGDLVGIKYFP+ P+E + +
Sbjct: 457 LEVISRVGDLVGIKYFPAQPKEQQQE 482
>ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera]
gi|297734488|emb|CBI15735.3| unnamed protein product
[Vitis vinifera]
Length = 513
Score = 53.1 bits (126), Expect(2) = 1e-11
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHT+EDL+ LEV
Sbjct: 454 FPATPLLLARARICISASHTREDLIKGLEV 483
Score = 42.0 bits (97), Expect(2) = 1e-11
Identities = 18/32 (56%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Frame = -2
Query: 94 IQVISKVGDLVGIKYFPSDPREHR-DDGMIKL 2
++VIS+VGDLV IKYFP++PR+ + ++G +KL
Sbjct: 481 LEVISRVGDLVAIKYFPAEPRKQQLEEGRVKL 512
>ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera]
Length = 489
Score = 53.1 bits (126), Expect(2) = 1e-11
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHT+EDL+ LEV
Sbjct: 430 FPATPLLLARARICISASHTREDLIKGLEV 459
Score = 42.0 bits (97), Expect(2) = 1e-11
Identities = 18/32 (56%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Frame = -2
Query: 94 IQVISKVGDLVGIKYFPSDPREHR-DDGMIKL 2
++VIS+VGDLV IKYFP++PR+ + ++G +KL
Sbjct: 457 LEVISRVGDLVAIKYFPAEPRKQQLEEGRVKL 488
>dbj|BAC55228.1| serine palmitoyltransferase [Lotus japonicus]
Length = 489
Score = 52.0 bits (123), Expect(2) = 1e-11
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASH++EDLV AL+V
Sbjct: 430 FPATPLLLARARICISASHSREDLVTALQV 459
Score = 43.1 bits (100), Expect(2) = 1e-11
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDDG 14
++QVIS+VGDLVGIKYFP++P + + +G
Sbjct: 456 ALQVISRVGDLVGIKYFPAEPSKQQQEG 483
>gb|EMJ11162.1| hypothetical protein PRUPE_ppa004890mg [Prunus persica]
Length = 487
Score = 55.5 bits (132), Expect(2) = 1e-11
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASHTKEDL+ ALEV
Sbjct: 430 FPATPLLLARARICISASHTKEDLLRALEV 459
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDDGMIKL 2
+++VIS+VGDLVGIKYFP++P + ++ IKL
Sbjct: 456 ALEVISRVGDLVGIKYFPAEPSK-QETNAIKL 486
>gb|ESW23739.1| hypothetical protein PHAVU_004G071100g [Phaseolus vulgaris]
Length = 487
Score = 52.0 bits (123), Expect(2) = 2e-11
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISASH++EDL+ AL+V
Sbjct: 430 FPATPLLLARARICISASHSREDLIKALQV 459
Score = 42.4 bits (98), Expect(2) = 2e-11
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRD 20
++QVIS+VGDLVGIKYFP++P + +D
Sbjct: 456 ALQVISRVGDLVGIKYFPAEPAKQQD 481
>ref|XP_003548027.1| PREDICTED: long chain base biosynthesis protein 2a-like [Glycine
max]
Length = 490
Score = 50.8 bits (120), Expect(2) = 2e-11
Identities = 22/30 (73%), Positives = 28/30 (93%)
Frame = -3
Query: 270 FPATPLLLSRARFCISASHTKEDLVHALEV 181
FPATPLLL+RAR CISA+H++EDL+ AL+V
Sbjct: 430 FPATPLLLARARICISAAHSREDLIKALQV 459
Score = 43.1 bits (100), Expect(2) = 2e-11
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDDG 14
++QVIS+VGDLVGIKYFP++P + + +G
Sbjct: 456 ALQVISRVGDLVGIKYFPAEPTKQQQEG 483
>ref|XP_006290987.1| hypothetical protein CARUB_v10017101mg [Capsella rubella]
gi|482559694|gb|EOA23885.1| hypothetical protein
CARUB_v10017101mg [Capsella rubella]
Length = 489
Score = 54.3 bits (129), Expect(2) = 4e-11
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -3
Query: 273 GFPATPLLLSRARFCISASHTKEDLVHALEV 181
GFPATPLLL+RAR CISASH++EDL+ AL+V
Sbjct: 429 GFPATPLLLARARICISASHSREDLIKALQV 459
Score = 38.9 bits (89), Expect(2) = 4e-11
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHRDD 17
++QVISK GDL GIKYFP+ P++ D
Sbjct: 456 ALQVISKAGDLTGIKYFPAAPKKQDQD 482
>dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]
Length = 489
Score = 52.0 bits (123), Expect(2) = 4e-11
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = -3
Query: 273 GFPATPLLLSRARFCISASHTKEDLVHALEV 181
GFPATPLLL+RAR CISA+H++EDL ALEV
Sbjct: 429 GFPATPLLLARARICISAAHSREDLNKALEV 459
Score = 41.2 bits (95), Expect(2) = 4e-11
Identities = 17/33 (51%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHR-DDGMIKL 2
+++VIS+VGDLVGIKYFP++P++ + ++ +KL
Sbjct: 456 ALEVISRVGDLVGIKYFPAEPKKQQLEENRVKL 488
>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
long chain base subunit [Nicotiana benthamiana]
Length = 489
Score = 52.0 bits (123), Expect(2) = 4e-11
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = -3
Query: 273 GFPATPLLLSRARFCISASHTKEDLVHALEV 181
GFPATPLLL+RAR CISA+H++EDL ALEV
Sbjct: 429 GFPATPLLLARARICISAAHSREDLNKALEV 459
Score = 41.2 bits (95), Expect(2) = 4e-11
Identities = 17/33 (51%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDPREHR-DDGMIKL 2
+++VIS+VGDLVGIKYFP++P++ + ++ +KL
Sbjct: 456 ALEVISRVGDLVGIKYFPAEPKKQQLEENRVKL 488
>ref|XP_006404217.1| hypothetical protein EUTSA_v10010322mg [Eutrema salsugineum]
gi|557105336|gb|ESQ45670.1| hypothetical protein
EUTSA_v10010322mg [Eutrema salsugineum]
Length = 489
Score = 54.3 bits (129), Expect(2) = 5e-11
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -3
Query: 273 GFPATPLLLSRARFCISASHTKEDLVHALEV 181
GFPATPLLL+RAR CISASH++EDL+ AL+V
Sbjct: 429 GFPATPLLLARARICISASHSREDLIKALQV 459
Score = 38.5 bits (88), Expect(2) = 5e-11
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Frame = -2
Query: 97 SIQVISKVGDLVGIKYFPSDP-REHRDDGMIKL 2
++QVISK GDL GIKYFP+ P ++ ++ IKL
Sbjct: 456 ALQVISKAGDLTGIKYFPAAPKKQEQEKNSIKL 488
>ref|XP_006364387.1| PREDICTED: long chain base biosynthesis protein 2b-like [Solanum
tuberosum]
Length = 489
Score = 51.2 bits (121), Expect(2) = 5e-11
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = -3
Query: 273 GFPATPLLLSRARFCISASHTKEDLVHALEV 181
GFPATPLLL+RAR CISA+H++EDL ALEV
Sbjct: 429 GFPATPLLLARARICISAAHSREDLNIALEV 459
Score = 41.6 bits (96), Expect(2) = 5e-11
Identities = 17/34 (50%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Frame = -2
Query: 100 VSIQVISKVGDLVGIKYFPSDPREHR-DDGMIKL 2
++++VISKVGDL GIKYFP++P++ + ++ +KL
Sbjct: 455 IALEVISKVGDLTGIKYFPAEPQKQQVEENRVKL 488