BLASTX nr result

ID: Rheum21_contig00040305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00040305
         (335 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004297931.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]    70   2e-10
ref|XP_006489626.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_006420344.1| hypothetical protein CICLE_v10006438mg [Citr...    67   2e-09
gb|EMJ26714.1| hypothetical protein PRUPE_ppa025358mg [Prunus pe...    67   2e-09
ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
gb|EXB50649.1| hypothetical protein L484_004167 [Morus notabilis]      61   1e-07
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    61   1e-07
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
gb|EPS72239.1| hypothetical protein M569_02517, partial [Genlise...    60   4e-07
ref|XP_004959800.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
gb|ESW32437.1| hypothetical protein PHAVU_002G3226001g [Phaseolu...    59   7e-07
gb|EPS70369.1| hypothetical protein M569_04391, partial [Genlise...    59   7e-07
gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus pe...    59   9e-07
ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    57   2e-06
ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    57   2e-06
tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea m...    57   2e-06
ref|XP_006658718.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>ref|XP_004297931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Fragaria vesca subsp. vesca]
          Length = 686

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/47 (63%), Positives = 38/47 (80%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRE 193
           M+  GVKKQPGCSWI+VNN GHVFL+GD  HP+F  IC++L LL+ +
Sbjct: 621 MKEKGVKKQPGCSWIEVNNIGHVFLSGDKSHPKFRRICYVLELLYTD 667


>ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 691

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRE 193
           MR  GVKKQP CSW++VN  GHVFL+GD  HPQF  +C +L LLH E
Sbjct: 618 MREKGVKKQPACSWMEVNGSGHVFLSGDSSHPQFSRVCGVLGLLHME 664


>emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
          Length = 833

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRE 193
           MR  GVKKQP CSW++VN  GHVFL+GD  HPQF  +C +L LLH E
Sbjct: 760 MREKGVKKQPACSWMEVNGSGHVFLSGDSSHPQFSRVCGVLGLLHME 806


>ref|XP_006489626.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Citrus sinensis]
          Length = 676

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRE 193
           M+  GVKK+PGCSWIQ+N+ GHVFL+GD  HP+F  + ++L LLH E
Sbjct: 619 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 665


>ref|XP_006420344.1| hypothetical protein CICLE_v10006438mg [Citrus clementina]
           gi|557522217|gb|ESR33584.1| hypothetical protein
           CICLE_v10006438mg [Citrus clementina]
          Length = 659

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRE 193
           M+  GVKK+PGCSWIQ+N+ GHVFL+GD  HP+F  + ++L LLH E
Sbjct: 602 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 648


>gb|EMJ26714.1| hypothetical protein PRUPE_ppa025358mg [Prunus persica]
          Length = 676

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRE 193
           M+  GVKKQPGCSWI+VNN GHVFL+GD  HP+F  I  +L +LH E
Sbjct: 611 MKEKGVKKQPGCSWIEVNNIGHVFLSGDKSHPKFCRIYSVLEILHTE 657


>ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
           gi|449487596|ref|XP_004157705.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 675

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGG 184
           M+  GVKKQPGCSWI+VNN G+VFL+GD  +P FD IC +++L++ E  G
Sbjct: 623 MKNNGVKKQPGCSWIEVNNCGYVFLSGDCSNPHFDRICSVVKLVNLEING 672


>gb|EXB50649.1| hypothetical protein L484_004167 [Morus notabilis]
          Length = 636

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRE 193
           M+  GVKKQPGCSWI++NN  HVFL+GD  +PQF  I   L LL  E
Sbjct: 567 MKGAGVKKQPGCSWIELNNSSHVFLSGDSSNPQFSDISSGLELLRSE 613


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGGFGRTLLHD 160
           M+  G+KKQPGCSWI+V N  HVF+ GD  H +F++I  +L  LH +    G TL  D
Sbjct: 582 MKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHTLYED 639


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGGFGRTLLHD 160
           M+  G+KKQPGCSWI+V N  HVF+ GD  H +F++I  +L  LH +    G TL  D
Sbjct: 582 MKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHTLYED 639


>gb|EPS72239.1| hypothetical protein M569_02517, partial [Genlisea aurea]
          Length = 786

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGGFGRT-----L 169
           MR  GVKK+PGCSW++V N+ HVFL GD VHP+   I   LR L +  G  G       +
Sbjct: 643 MRDRGVKKEPGCSWLEVENKIHVFLMGDTVHPEMREIYAFLRELMQRVGKMGYVPDTSYV 702

Query: 168 LHDDE 154
           +HD E
Sbjct: 703 MHDME 707


>ref|XP_004959800.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Setaria italica]
          Length = 943

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = -3

Query: 333  MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGGFG-----RTL 169
            MR  GVKK+PGCSWI+V N+ HVFL GD  HP+   +   L ++  +    G     + +
Sbjct: 800  MRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPEAHEVYHFLEMVGAKMRKLGYLPDTKVV 859

Query: 168  LHDDEAH 148
            LHD E H
Sbjct: 860  LHDMEPH 866


>gb|ESW32437.1| hypothetical protein PHAVU_002G3226001g [Phaseolus vulgaris]
          Length = 683

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLL--HRERGGF---GRTL 169
           MR  G+KK PGCSWI+V N+ H FLAGD  HP +D I   L +L    E+ G+    + +
Sbjct: 540 MRKKGLKKTPGCSWIEVGNKVHTFLAGDESHPYYDKINEALSILLEQMEKEGYVLDTKEV 599

Query: 168 LHD-DEAH 148
           LHD DE H
Sbjct: 600 LHDVDEEH 607


>gb|EPS70369.1| hypothetical protein M569_04391, partial [Genlisea aurea]
          Length = 629

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/47 (53%), Positives = 36/47 (76%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRE 193
           M+  GVKKQPGCSWI+ + +G+VFL+GD  HP+F +I   L L+++E
Sbjct: 580 MKEKGVKKQPGCSWIESSGEGNVFLSGDKTHPEFVAILTTLSLIYQE 626


>gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus persica]
          Length = 689

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGGFG-----RTL 169
           MR  GVKK+PGCSWI V N  HVFL GD VHP+  ++   L  L  E    G     + +
Sbjct: 546 MRDRGVKKEPGCSWIDVENMVHVFLVGDTVHPEVQAVYKYLEQLGLEMRKLGYLPDTKFV 605

Query: 168 LHDDEA 151
           LHD E+
Sbjct: 606 LHDMES 611


>ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/68 (47%), Positives = 38/68 (55%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGGFGRTLLHDDE 154
           MR  GV+K PGCSWI VN   H FLAG + HPQ DSI   L  L +E   F     H+ +
Sbjct: 385 MREKGVRKHPGCSWISVNRVVHEFLAGSLSHPQIDSIYHTLNGLVKEMKVFAS--YHNTQ 442

Query: 153 AHWILHGE 130
              +LH E
Sbjct: 443 LDALLHTE 450


>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLL 202
           M++ GV K+PGCSWI++ +Q HVF+ GD +HPQ   IC  LR L
Sbjct: 645 MKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRL 688


>ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLL 202
           M++ GV K+PGCSWI++ +Q HVF+ GD +HPQ   IC  LR L
Sbjct: 627 MKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRL 670


>tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGGFG-----RTL 169
           MR  GVKK+PGCSWI+  N+ HVFL GD  HP+   +   L ++  +    G     + +
Sbjct: 659 MRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVV 718

Query: 168 LHDDEAH 148
           LHD E H
Sbjct: 719 LHDMEPH 725


>ref|XP_006658718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Oryza brachyantha]
          Length = 749

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = -3

Query: 333 MRVLGVKKQPGCSWIQVNNQGHVFLAGDIVHPQFDSICFILRLLHRERGGFG-----RTL 169
           MR  GVKK+PGCSWI+V ++ HVFL GD  HP+  ++   L ++       G     + +
Sbjct: 606 MRDRGVKKEPGCSWIEVGSKTHVFLVGDTKHPEAQAVYQFLEVIGARMRKLGYVPDTKFV 665

Query: 168 LHDDEAH 148
           LHD E H
Sbjct: 666 LHDMEPH 672


Top