BLASTX nr result
ID: Rheum21_contig00040294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040294
(343 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29756.3| unnamed protein product [Vitis vinifera] 134 2e-29
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like... 134 2e-29
ref|XP_006471018.1| PREDICTED: ATP-dependent DNA helicase Q-like... 119 4e-25
ref|XP_006431828.1| hypothetical protein CICLE_v10000077mg [Citr... 117 2e-24
ref|XP_002303149.2| DNA helicase family protein [Populus trichoc... 115 5e-24
gb|EOX98092.1| DNA helicase (RECQl4A) isoform 2 [Theobroma cacao] 113 2e-23
gb|EOX98091.1| DNA helicase isoform 1 [Theobroma cacao] 113 2e-23
gb|EXB87372.1| ATP-dependent DNA helicase Q-like 4A [Morus notab... 108 7e-22
emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana] 108 1e-21
ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidops... 108 1e-21
ref|XP_004485478.1| PREDICTED: ATP-dependent DNA helicase Q-like... 107 1e-21
ref|XP_006304960.1| hypothetical protein CARUB_v10012033mg, part... 107 2e-21
gb|EMJ14919.1| hypothetical protein PRUPE_ppa000416mg [Prunus pe... 106 3e-21
ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like... 103 3e-20
gb|ESW20522.1| hypothetical protein PHAVU_006G216200g [Phaseolus... 102 5e-20
ref|XP_004301498.1| PREDICTED: ATP-dependent DNA helicase Q-like... 102 7e-20
ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyra... 101 9e-20
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi... 101 1e-19
ref|XP_006417403.1| hypothetical protein EUTSA_v10006602mg [Eutr... 99 4e-19
ref|XP_003592992.1| ATP-dependent DNA helicase Q1, partial [Medi... 99 8e-19
>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 134 bits (336), Expect = 2e-29
Identities = 67/112 (59%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Frame = -1
Query: 334 HAQVMERLSGDDVMIEGQVIGQTEVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSIS 155
H QV+ + SG + GQV PN DDDILE+IDVDQIVMEHYQ+ TPQPSIS
Sbjct: 165 HIQVVGQSSGTCNVHTGQVKELVGAFPNGTDDDDILEDIDVDQIVMEHYQSTCTPQPSIS 224
Query: 154 KNPSITPAV-VCNTAKHDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKDM 2
K P +TP + N AKH+ LP ELCSNC HG+KLGLCP+ A+HLQE+KDM
Sbjct: 225 KLPPVTPTLSTVNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDM 276
>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
vinifera]
Length = 1224
Score = 134 bits (336), Expect = 2e-29
Identities = 67/112 (59%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Frame = -1
Query: 334 HAQVMERLSGDDVMIEGQVIGQTEVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSIS 155
H QV+ + SG + GQV PN DDDILE+IDVDQIVMEHYQ+ TPQPSIS
Sbjct: 154 HIQVVGQSSGTCNVHTGQVKELVGAFPNGTDDDDILEDIDVDQIVMEHYQSTCTPQPSIS 213
Query: 154 KNPSITPAV-VCNTAKHDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKDM 2
K P +TP + N AKH+ LP ELCSNC HG+KLGLCP+ A+HLQE+KDM
Sbjct: 214 KLPPVTPTLSTVNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDM 265
>ref|XP_006471018.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1
[Citrus sinensis] gi|568833708|ref|XP_006471019.1|
PREDICTED: ATP-dependent DNA helicase Q-like 4A-like
isoform X2 [Citrus sinensis]
Length = 1212
Score = 119 bits (298), Expect = 4e-25
Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = -1
Query: 307 GDDVMIEGQVIGQTEVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITP-A 131
G+ GQ+ EV N I DD+ILE IDVDQIVMEHY ++ TP+PSIS+ PSITP A
Sbjct: 194 GNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSISRLPSITPNA 253
Query: 130 VVCNTAKHDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKDM 2
A+ D CLP ELCS C HG KLGLCP+ +SH+Q+MKDM
Sbjct: 254 GNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDM 296
>ref|XP_006431828.1| hypothetical protein CICLE_v10000077mg [Citrus clementina]
gi|557533950|gb|ESR45068.1| hypothetical protein
CICLE_v10000077mg [Citrus clementina]
Length = 1151
Score = 117 bits (293), Expect = 2e-24
Identities = 59/103 (57%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Frame = -1
Query: 307 GDDVMIEGQVIGQTEVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITP-A 131
G+ GQ+ EV N I DD+ILE IDVDQIVMEHY ++ TP+PSIS+ P ITP A
Sbjct: 133 GNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSISRLPPITPNA 192
Query: 130 VVCNTAKHDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKDM 2
A+ D CLP ELCS C HG KLGLCP+ +SH+Q+MKDM
Sbjct: 193 GNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDM 235
>ref|XP_002303149.2| DNA helicase family protein [Populus trichocarpa]
gi|550342106|gb|EEE78128.2| DNA helicase family protein
[Populus trichocarpa]
Length = 1194
Score = 115 bits (289), Expect = 5e-24
Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = -1
Query: 265 EVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNT-AKHDSACLP 89
E + + I DDD++E+IDVDQIVMEHYQA TPQP+ISK P ITP N+ + + +P
Sbjct: 211 ETSADYIDDDDLIESIDVDQIVMEHYQATCTPQPAISKFPPITPTADQNSFIRPEEISVP 270
Query: 88 SELCSNCCHGYKLGLCPDMASHLQEMKDM 2
ELCSNC HG+KLGLCP+ A HLQEMKDM
Sbjct: 271 PELCSNCSHGFKLGLCPEAAKHLQEMKDM 299
>gb|EOX98092.1| DNA helicase (RECQl4A) isoform 2 [Theobroma cacao]
Length = 1042
Score = 113 bits (283), Expect = 2e-23
Identities = 54/93 (58%), Positives = 67/93 (72%)
Frame = -1
Query: 283 QVIGQTEVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNTAKHD 104
Q+ EV ++I DDD+L++IDVDQIV +HYQ+ TPQPS+SK P I A +
Sbjct: 191 QLEQSAEVLADEIDDDDLLKDIDVDQIVSKHYQSTCTPQPSVSKFPPIAQMDKRAFAGEE 250
Query: 103 SACLPSELCSNCCHGYKLGLCPDMASHLQEMKD 5
ACLP+ELCSNC HG KLGLCP+ ASH+QEMKD
Sbjct: 251 EACLPTELCSNCSHGCKLGLCPEAASHVQEMKD 283
>gb|EOX98091.1| DNA helicase isoform 1 [Theobroma cacao]
Length = 1250
Score = 113 bits (283), Expect = 2e-23
Identities = 54/93 (58%), Positives = 67/93 (72%)
Frame = -1
Query: 283 QVIGQTEVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNTAKHD 104
Q+ EV ++I DDD+L++IDVDQIV +HYQ+ TPQPS+SK P I A +
Sbjct: 245 QLEQSAEVLADEIDDDDLLKDIDVDQIVSKHYQSTCTPQPSVSKFPPIAQMDKRAFAGEE 304
Query: 103 SACLPSELCSNCCHGYKLGLCPDMASHLQEMKD 5
ACLP+ELCSNC HG KLGLCP+ ASH+QEMKD
Sbjct: 305 EACLPTELCSNCSHGCKLGLCPEAASHVQEMKD 337
>gb|EXB87372.1| ATP-dependent DNA helicase Q-like 4A [Morus notabilis]
Length = 1088
Score = 108 bits (270), Expect = 7e-22
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = -1
Query: 253 NDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNTAKHDSACLPSELCS 74
+D+ DD+ILENIDVDQIV E YQ+ TPQPS+SK P ITP++ + +CLP ELCS
Sbjct: 126 SDMDDDEILENIDVDQIV-EQYQSTCTPQPSMSKLPPITPSIDKSNFMGHESCLPPELCS 184
Query: 73 NCCHGYKLGLCPDMASHLQEMKDM 2
C HG+KLG CP+ A HLQEMKDM
Sbjct: 185 ICSHGFKLGTCPEAACHLQEMKDM 208
>emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana]
Length = 1182
Score = 108 bits (269), Expect = 1e-21
Identities = 50/85 (58%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = -1
Query: 253 NDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNTAKHDSAC-LPSELC 77
+D+ DDDILENIDVDQIVMEHY + STPQPS+S TP V + ++ + C LP ELC
Sbjct: 203 DDMDDDDILENIDVDQIVMEHYHSTSTPQPSVSNFSLRTPPVDRSASRLEEECNLPPELC 262
Query: 76 SNCCHGYKLGLCPDMASHLQEMKDM 2
SNC HG KLGLCP+ ++H+++MKD+
Sbjct: 263 SNCSHGIKLGLCPEASTHVEQMKDV 287
>ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
gi|75329797|sp|Q8L840.1|RQL4A_ARATH RecName:
Full=ATP-dependent DNA helicase Q-like 4A; AltName:
Full=RecQ-like protein 4A; Short=AtRecQ4A;
Short=AtRecQl4A; AltName: Full=SGS1-like protein;
Short=AtSGS1 gi|21539533|gb|AAM53319.1| DNA helicase
isolog [Arabidopsis thaliana] gi|33589672|gb|AAQ22602.1|
At1g10930 [Arabidopsis thaliana]
gi|332190544|gb|AEE28665.1| ATP-dependent DNA helicase
Q-like 4A [Arabidopsis thaliana]
Length = 1188
Score = 108 bits (269), Expect = 1e-21
Identities = 50/85 (58%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = -1
Query: 253 NDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNTAKHDSAC-LPSELC 77
+D+ DDDILENIDVDQIVMEHY + STPQPS+S TP V + ++ + C LP ELC
Sbjct: 209 DDMDDDDILENIDVDQIVMEHYHSTSTPQPSVSNFSLRTPPVDRSASRLEEECNLPPELC 268
Query: 76 SNCCHGYKLGLCPDMASHLQEMKDM 2
SNC HG KLGLCP+ ++H+++MKD+
Sbjct: 269 SNCSHGIKLGLCPEASTHVEQMKDV 293
>ref|XP_004485478.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1
[Cicer arietinum] gi|502076857|ref|XP_004485479.1|
PREDICTED: ATP-dependent DNA helicase Q-like 4A-like
isoform X2 [Cicer arietinum]
Length = 1157
Score = 107 bits (268), Expect = 1e-21
Identities = 60/112 (53%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Frame = -1
Query: 331 AQVMERLSGDDVMIEGQVIGQTEVAPNDIS--DDDILENIDVDQIVMEHYQAASTPQPSI 158
++V++ + Q + P+DI+ DDDILENIDVDQIV E YQ++ TPQPSI
Sbjct: 135 SRVLDTSVNNHTKYASQTNKSAKCVPDDINADDDDILENIDVDQIV-EKYQSSCTPQPSI 193
Query: 157 SKNPSITP-AVVCNTAKHDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKD 5
SK P ITP A N A++ LP ELC +C HGYKLGLCP+ ASHLQE+KD
Sbjct: 194 SKFPPITPMADKDNFARNGDINLPPELCLDCIHGYKLGLCPEAASHLQELKD 245
>ref|XP_006304960.1| hypothetical protein CARUB_v10012033mg, partial [Capsella rubella]
gi|482573671|gb|EOA37858.1| hypothetical protein
CARUB_v10012033mg, partial [Capsella rubella]
Length = 1179
Score = 107 bits (267), Expect = 2e-21
Identities = 49/85 (57%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = -1
Query: 253 NDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNTAK-HDSACLPSELC 77
+DI DD++LENIDVDQIVMEHY + STPQPS S TP V + ++ + C+PSELC
Sbjct: 197 DDIDDDELLENIDVDQIVMEHYHSTSTPQPSASNFSLRTPPVDRSASRFEEDGCMPSELC 256
Query: 76 SNCCHGYKLGLCPDMASHLQEMKDM 2
SNC HG KLGLCP+ ++H+ +MKD+
Sbjct: 257 SNCSHGIKLGLCPEASTHVDQMKDV 281
>gb|EMJ14919.1| hypothetical protein PRUPE_ppa000416mg [Prunus persica]
Length = 1198
Score = 106 bits (265), Expect = 3e-21
Identities = 57/95 (60%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Frame = -1
Query: 283 QVIGQTEVAPNDISDDD-ILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNT-AK 110
Q+ +V NDI DDD ILENIDVDQIV E YQ+ TPQP ISK P ITP++ ++ A+
Sbjct: 144 QIKHSAKVLVNDIDDDDEILENIDVDQIV-EQYQSNCTPQPLISKLPPITPSIDKDSIAR 202
Query: 109 HDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKD 5
+ LP +LCSNC HG K+GLCP+ ASHLQEMKD
Sbjct: 203 QEVTSLPPDLCSNCIHGLKIGLCPEAASHLQEMKD 237
>ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1
[Glycine max] gi|571472092|ref|XP_006585495.1|
PREDICTED: ATP-dependent DNA helicase Q-like 4A-like
isoform X2 [Glycine max]
Length = 1160
Score = 103 bits (256), Expect = 3e-20
Identities = 58/97 (59%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Frame = -1
Query: 286 GQVIGQTEVAPNDISDDD--ILENIDVDQIVMEHYQAASTPQPSISKNPSITP-AVVCNT 116
GQ+I + DI DDD IL NIDVDQIV EH Q+ TP+PSISK P ITP A N
Sbjct: 153 GQIIKSSNCMAVDIDDDDDAILANIDVDQIVEEH-QSTCTPKPSISKFPPITPTADKDNF 211
Query: 115 AKHDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKD 5
A+ LP ELC +C HGYKLG CP+ ASHLQEMKD
Sbjct: 212 ARQGDNVLPPELCLDCIHGYKLGFCPEAASHLQEMKD 248
>gb|ESW20522.1| hypothetical protein PHAVU_006G216200g [Phaseolus vulgaris]
Length = 1167
Score = 102 bits (254), Expect = 5e-20
Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Frame = -1
Query: 286 GQVIGQTEVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITP-AVVCNTAK 110
GQ+ + DI DD+ILENIDVDQIV E YQ+ TP+PSISK P ITP A + A+
Sbjct: 164 GQINESSNCMSGDIDDDNILENIDVDQIV-EKYQSTCTPKPSISKLPPITPIADKDDFAR 222
Query: 109 HDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKD 5
LP +LC +C HGYKLGLCP+ A HLQE+KD
Sbjct: 223 EGDNALPPDLCLDCIHGYKLGLCPEAAIHLQELKD 257
>ref|XP_004301498.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Fragaria
vesca subsp. vesca]
Length = 1156
Score = 102 bits (253), Expect = 7e-20
Identities = 47/87 (54%), Positives = 66/87 (75%)
Frame = -1
Query: 265 EVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNTAKHDSACLPS 86
E+ +D DD ILENIDVD IV E YQ++ TP+PSISK P +TP++ +T + ++ CLP
Sbjct: 152 EMDDDDDDDDSILENIDVDHIV-EQYQSSCTPKPSISKLPPLTPSI--HTERQEATCLPP 208
Query: 85 ELCSNCCHGYKLGLCPDMASHLQEMKD 5
ELC+NC HG+ +G+C + A+HLQE+KD
Sbjct: 209 ELCTNCVHGFMIGVCQEAANHLQELKD 235
>ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis
lyrata subsp. lyrata]
Length = 1189
Score = 101 bits (252), Expect = 9e-20
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -1
Query: 250 DISDDDILENIDVDQIVMEHYQAASTPQPSIS----KNPSITPAVVCNTAKHDSACLPSE 83
D+ DDDIL+NIDVDQIVMEHY + STPQPS+S + P P + + LP E
Sbjct: 205 DMDDDDILKNIDVDQIVMEHYHSTSTPQPSVSNFSLRTPPAPPVDRSASRLEEECYLPPE 264
Query: 82 LCSNCCHGYKLGLCPDMASHLQEMKDM 2
LCSNC HG KLGLCP+ ++H+++MKD+
Sbjct: 265 LCSNCSHGIKLGLCPEASTHVEQMKDV 291
>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
[Ricinus communis]
Length = 1233
Score = 101 bits (251), Expect = 1e-19
Identities = 54/89 (60%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = -1
Query: 265 EVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITP-AVVCNTAKHDSACLP 89
E + + I DDD+L NIDVDQIVMEH Q+ TP S K PSITP A N A+ D LP
Sbjct: 214 EASTDFIDDDDLLGNIDVDQIVMEHNQSNCTPPNS--KFPSITPTADKHNFARSDEMFLP 271
Query: 88 SELCSNCCHGYKLGLCPDMASHLQEMKDM 2
+ELC NC HG+KLGLCP+ +HLQEMKDM
Sbjct: 272 TELCQNCNHGFKLGLCPEAGNHLQEMKDM 300
>ref|XP_006417403.1| hypothetical protein EUTSA_v10006602mg [Eutrema salsugineum]
gi|557095174|gb|ESQ35756.1| hypothetical protein
EUTSA_v10006602mg [Eutrema salsugineum]
Length = 1174
Score = 99.4 bits (246), Expect = 4e-19
Identities = 47/90 (52%), Positives = 62/90 (68%)
Frame = -1
Query: 271 QTEVAPNDISDDDILENIDVDQIVMEHYQAASTPQPSISKNPSITPAVVCNTAKHDSACL 92
Q E + DDDIL NID+DQI MEHYQ+ ST QPS+S P P V + ++ + CL
Sbjct: 197 QLESGEAFLDDDDILMNIDLDQIAMEHYQSTST-QPSVSNFPLRNPPVDRSASRREEECL 255
Query: 91 PSELCSNCCHGYKLGLCPDMASHLQEMKDM 2
P ELC NC HG KLGLCP+ ++HL++MK++
Sbjct: 256 PPELCFNCSHGIKLGLCPEASTHLEQMKNV 285
>ref|XP_003592992.1| ATP-dependent DNA helicase Q1, partial [Medicago truncatula]
gi|355482040|gb|AES63243.1| ATP-dependent DNA helicase
Q1, partial [Medicago truncatula]
Length = 556
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/112 (49%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Frame = -1
Query: 331 AQVMERLSGDDVMIEGQVIGQTEVAPN--DISDDDILENIDVDQIVMEHYQAASTPQPSI 158
++V++ L + GQ T+ + +I DDDILE++D+DQIV E YQ+ TPQP +
Sbjct: 120 SRVVDSLVNNHTKYTGQTNESTKCVADTINIDDDDILESMDLDQIV-EKYQSTCTPQPPM 178
Query: 157 SKNPSITP-AVVCNTAKHDSACLPSELCSNCCHGYKLGLCPDMASHLQEMKD 5
SK P TP A N A LP ELC NC HGYKLG+CP+ ASHLQE KD
Sbjct: 179 SKFPPFTPTADKDNFAGQGDTFLPPELCLNCIHGYKLGICPEAASHLQEFKD 230