BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00040292
         (347 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    75   9e-12
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            75   9e-12
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             75   1e-11
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...    74   2e-11
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   74   2e-11
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    73   3e-11
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    72   6e-11
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    72   6e-11
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...    72   8e-11
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...    70   2e-10
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660...    70   2e-10
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A...    70   3e-10
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    70   3e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    69   5e-10
ref|XP_006582752.1| PREDICTED: uncharacterized protein LOC102662...    69   6e-10
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    69   6e-10
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    69   8e-10
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 69   8e-10
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    69   8e-10
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...    68   1e-09

>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/84 (40%), Positives = 56/84 (66%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           +F  GL+ ++R   A   GF  G FP++YL +PL  RKL++ DY PL ++L   L S  +
Sbjct: 597 LFQAGLDLSERITSA-AYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVS 655

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           + LS+AGR Q++ +++ G+++FWM
Sbjct: 656 KALSFAGRTQLISSVIFGLINFWM 679


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/84 (40%), Positives = 56/84 (66%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           +F  GL+ ++R   A   GF  G FP++YL +PL  RKL++ DY PL ++L   L S  +
Sbjct: 597 LFQAGLDLSERITSA-AYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVS 655

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           + LS+AGR Q++ +++ G+++FWM
Sbjct: 656 KALSFAGRTQLISSVIFGLINFWM 679


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 32/85 (37%), Positives = 57/85 (67%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           +F GGL  +++ E ++ +G T G FP+KYL +P+ + +L   DY PL ++++  + + S+
Sbjct: 107 MFLGGLTDSEKQELSSCMGITLGNFPMKYLGLPVNTHRLTKADYEPLLEKIRAKVSNWSS 166

Query: 272 RNLSYAGRAQVVRAILEGVVSFWMQ 346
           + LSYAG+ Q+V  ++ G+VS W Q
Sbjct: 167 KLLSYAGKIQLVSVVIYGMVSSWSQ 191


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 31/85 (36%), Positives = 53/85 (62%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           ++  G+   +      L GF  G FP +YL +PL S +L V  YAPL  ++   +   S 
Sbjct: 66  IYSAGIRPHELSHIQQLTGFNLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSR 125

Query: 272 RNLSYAGRAQVVRAILEGVVSFWMQ 346
           ++LSYAG+ +++RA+++G+V+FWM+
Sbjct: 126 KSLSYAGKLELIRAVIQGIVNFWMK 150


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           +F  GLN  +      +IGFT+G  PV+YL + L   +L   DY PL DR+K  ++S + 
Sbjct: 190 IFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKINSWTT 249

Query: 272 RNLSYAGRAQVVRAILEGVVSFW 340
           R LSYAGR Q+V  ++ G+V+ W
Sbjct: 250 RYLSYAGRLQLVGTVIYGMVNAW 272


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/84 (39%), Positives = 56/84 (66%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           ++  GL+ ++ D  A+  GF  G  PV+YL +PL SRKL + +YAPL +++    +S   
Sbjct: 634 LYHAGLSQSESDSMASY-GFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVV 692

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           R LS+AGR Q++ +++ G+V+FW+
Sbjct: 693 RLLSFAGRVQLLASVISGIVNFWI 716


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/84 (40%), Positives = 49/84 (58%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           V+  GL+   R E  +   F  G  PV+YL +PL +++    DY PL D +KQ + S SA
Sbjct: 73  VYLAGLSHTTRQEVIDRFSFAVGTLPVRYLGLPLVTKQFSSTDYLPLIDHIKQKICSWSA 132

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           R LSY GR  ++ +IL  + +FWM
Sbjct: 133 RFLSYTGRLNLISSILWSICNFWM 156


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/79 (40%), Positives = 52/79 (65%)
 Frame = +2

Query: 104 GLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSARNLS 283
           G N A+    A+ +G T G  PV+YL +PL S+K++  DY PL DR+     S +AR+LS
Sbjct: 741 GGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLS 800

Query: 284 YAGRAQVVRAILEGVVSFW 340
           +AGR Q++++++   ++FW
Sbjct: 801 FAGRLQLLKSVIYSTINFW 819


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 32/85 (37%), Positives = 53/85 (62%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           ++ GG+    R +    +G+T    P KYL +PL S+KL  + + PL +++   ++S +A
Sbjct: 536 IYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTA 595

Query: 272 RNLSYAGRAQVVRAILEGVVSFWMQ 346
           + LSYAGRAQ+V+ +L GV + W Q
Sbjct: 596 KKLSYAGRAQLVKTVLFGVQALWAQ 620


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/84 (39%), Positives = 49/84 (58%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           VF GGLN         + GF +G  PV+YL +PL  +KL V  Y PL +++   +   S+
Sbjct: 217 VFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSS 276

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           + LS AGR Q+VR+I+  +  +WM
Sbjct: 277 KLLSIAGRIQLVRSIITAIAQYWM 300


>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
          Length = 303

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/84 (34%), Positives = 52/84 (61%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           ++   +   +      L GF+ G FP +YL +PL S +L V  YAPL  ++   +   S 
Sbjct: 66  IYSSSIRTHELSHIQQLTGFSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSR 125

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           ++LSYAG+ +++RA+++G+V+FW+
Sbjct: 126 KSLSYAGKLELIRAVIQGIVNFWI 149


>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 192

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/85 (35%), Positives = 53/85 (62%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           ++  G+   +      L GF+ G FP +YL +PL S +L V  YA L  ++   +   S 
Sbjct: 23  IYSTGIRPHELSHIQQLTGFSLGDFPFRYLGVPLLSSRLNVCHYALLLSKITGLIQGWSK 82

Query: 272 RNLSYAGRAQVVRAILEGVVSFWMQ 346
           ++LSYAG+ +++RA+++G+V+FWM+
Sbjct: 83  KSLSYAGKLELIRAVIQGIVNFWME 107


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/84 (39%), Positives = 50/84 (59%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           V+F GL+     E      F  G  PV+YL +PL +++L   DY PL + +K+ + S SA
Sbjct: 125 VYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSA 184

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           R LSYAGR  ++ ++L  + +FWM
Sbjct: 185 RFLSYAGRLNLISSVLWSICNFWM 208


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/84 (35%), Positives = 55/84 (65%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           V+  GL+A  R+E A+   F+ G  PV+YL +PL +++L   D  PL +++++ + S ++
Sbjct: 743 VYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTS 802

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           R LSYAGR  ++ ++L  + +FW+
Sbjct: 803 RFLSYAGRLNLISSVLWSICNFWL 826


>ref|XP_006582752.1| PREDICTED: uncharacterized protein LOC102662758 [Glycine max]
          Length = 151

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 28/68 (41%), Positives = 47/68 (69%)
 Frame = +2

Query: 140 LIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSARNLSYAGRAQVVRAIL 319
           L GF+ G FP +YL +PL S +L V  YAPL  ++   +   S ++LSY G+ +++RA++
Sbjct: 78  LTGFSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYTGKLELIRAVI 137

Query: 320 EGVVSFWM 343
           +G+++FWM
Sbjct: 138 QGILNFWM 145


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 28/84 (33%), Positives = 54/84 (64%)
 Frame = +2

Query: 92   VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
            ++  G++A+ R +  +   F  G  PV+YL +PL ++++   DY+PL + +K  + S +A
Sbjct: 1040 IYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTA 1099

Query: 272  RNLSYAGRAQVVRAILEGVVSFWM 343
            R+LSYAGR  ++ +++  + +FWM
Sbjct: 1100 RSLSYAGRLALLNSVIVSIANFWM 1123


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 31/79 (39%), Positives = 51/79 (64%)
 Frame = +2

Query: 104 GLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSARNLS 283
           G N  +    A  +G ++G  PV+YL +PL S+K+K  DY PL DR+     S +AR+LS
Sbjct: 288 GGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLS 347

Query: 284 YAGRAQVVRAILEGVVSFW 340
           +AGR Q++++++   ++FW
Sbjct: 348 FAGRLQLLKSVIYSTINFW 366


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 27/84 (32%), Positives = 53/84 (63%)
 Frame = +2

Query: 92  VFFGGLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSA 271
           ++  G++   R+   +   F  G  PV+YL +PL ++++   DY+PL D+++  + S +A
Sbjct: 316 LYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTA 375

Query: 272 RNLSYAGRAQVVRAILEGVVSFWM 343
           R+LSYAGR  ++ +++  + +FWM
Sbjct: 376 RSLSYAGRLALINSVIVSLSNFWM 399


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 31/79 (39%), Positives = 51/79 (64%)
 Frame = +2

Query: 104 GLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSARNLS 283
           G N  +    A  +G ++G  PV+YL +PL S+K+K  DY PL DR+     S +AR+LS
Sbjct: 288 GGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLS 347

Query: 284 YAGRAQVVRAILEGVVSFW 340
           +AGR Q++++++   ++FW
Sbjct: 348 FAGRLQLLKSVIYSTINFW 366


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/80 (36%), Positives = 51/80 (63%)
 Frame = +2

Query: 104 GLNAAKRDEYANLIGFTKGVFPVKYLDIPLQSRKLKVVDYAPLYDRLKQALHSRSARNLS 283
           G++A  + E   + GF +G  P KYL +P+ S+KL  + Y+PL D++   +   +AR LS
Sbjct: 118 GIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLS 177

Query: 284 YAGRAQVVRAILEGVVSFWM 343
           YAGR Q+V +++  + ++W+
Sbjct: 178 YAGRLQLVNSVMFALTNYWL 197