BLASTX nr result
ID: Rheum21_contig00040283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040283
(287 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 71 2e-10
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 70 2e-10
ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus... 67 2e-09
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 67 2e-09
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript... 64 2e-08
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn... 63 5e-08
gb|ABB46931.2| retrotransposon protein, putative, unclassified [... 61 1e-07
gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indi... 61 2e-07
gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 60 2e-07
gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indi... 60 2e-07
gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 60 2e-07
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group... 60 3e-07
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 60 3e-07
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 60 3e-07
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo... 60 3e-07
gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indi... 60 3e-07
gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japo... 60 3e-07
gb|ABA94593.2| retrotransposon protein, putative, unclassified [... 60 3e-07
ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] g... 60 3e-07
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group] 60 3e-07
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 70.9 bits (172), Expect = 2e-10
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
WFQKSR L GDRNT FFH ST + RR N++ L+D+ D W+++ +E+L +D++
Sbjct: 151 WFQKSREKLLALGDRNTTFFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLAMDYYRK 210
Query: 263 LYT 271
LY+
Sbjct: 211 LYS 213
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
WFQKSR + DGDRNTR+FHLST + R N++ LQ+ W+S+ +V+ +VL ++
Sbjct: 342 WFQKSRMEAICDGDRNTRYFHLSTVIRRSRNRIDMLQNNDGEWISNPMEVKAMVLGYWKH 401
Query: 263 LYTED 277
L++ED
Sbjct: 402 LFSED 406
>ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus sinensis]
Length = 809
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W QKSR +L+ GDRNT +FH T RR N++ T+Q+A W+ D+ ++Q FF
Sbjct: 578 WLQKSRKEWLIQGDRNTAYFHQKTLARRRRNRITTIQNANGEWIVDNEIIKQHATAFFST 637
Query: 263 LYTED 277
LYT +
Sbjct: 638 LYTSE 642
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = +2
Query: 8 SQRMLDLERYLCKXXXXXXXXXXXXWFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVT 187
S +L E L K WFQKSR ++ GDRNT FFH ST + RR N++ +
Sbjct: 174 SDDLLAKEEVLLKEMDLVLEQEETLWFQKSREKYIELGDRNTTFFHTSTIIRRRRNRIES 233
Query: 188 LQDATDAWLSDSSQVEQLVLDFFVALYT 271
L+ D W++D ++E + L ++ LY+
Sbjct: 234 LKGDDDRWVTDKVELEAMALTYYKRLYS 261
>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 855
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +2
Query: 8 SQRMLDLERYLCKXXXXXXXXXXXXWFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVT 187
+ +L E L K WFQKSR ++ GDRNT++FH T V RR N++
Sbjct: 728 TDNLLSKEEELIKEFDVVLEQEEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRRNRIEM 787
Query: 188 LQDATDAWLSDSSQVEQLVLDFFVALYT 271
L+ +W+S ++E++ +D++ LY+
Sbjct: 788 LKADDGSWVSQQQELEKMAVDYYSRLYS 815
>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
Length = 464
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +2
Query: 17 MLDLERYLCKXXXXXXXXXXXXWFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQD 196
+L+ E L K WFQKSR ++ GDRNT++FH ST + RR N++ L+D
Sbjct: 287 LLNKEDVLIKEFEVVLEQEEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKD 346
Query: 197 ATDAWLSDSSQVEQLVLDFFVALYT 271
W+ + ++ ++ ++++ LY+
Sbjct: 347 DEGKWVEEPEELAKMAVEYYQKLYS 371
>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR +L +GDRNTRFFH + NK+ L+D+ D S + ++E++ ++F
Sbjct: 872 WLQRSRIAWLKEGDRNTRFFHNKAVWRAKKNKITKLRDSDDTVHSTTKELERMATEYFQR 931
Query: 263 LYTEDPT 283
L+T DP+
Sbjct: 932 LFTADPS 938
>gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indica Group]
Length = 1143
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L +GDRNTRFFH + NK+ L+DA ++ +E + ++F
Sbjct: 268 WLQRSRVNWLKEGDRNTRFFHSRAVWRAKKNKITKLRDAEGTVQKSTTVLEDMATEYFEK 327
Query: 263 LYTEDP 280
+YT DP
Sbjct: 328 VYTADP 333
>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1557
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L +GDRNT+FFH A + NK+ L+DA + +EQ+ +F
Sbjct: 724 WLQRSRVNWLKEGDRNTKFFHNRVAWRAKKNKITKLRDAAGTFHRSKMVMEQMATQYFKD 783
Query: 263 LYTEDP 280
++T DP
Sbjct: 784 MFTADP 789
>gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indica Group]
Length = 1477
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR ++L +GDRNT+FFH A + NK+ L+D ++ + +E+L DFF
Sbjct: 581 WLQRSRVSWLKEGDRNTKFFHRQAAWRAKKNKINRLKDEDSRYVENKGDMEKLTRDFFQK 640
Query: 263 LYTED 277
LY D
Sbjct: 641 LYARD 645
>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L +GDRNT+FFH A + NK+ L+DA + +EQ+ +F
Sbjct: 752 WLQRSRVNWLKEGDRNTKFFHNRVAWRAKKNKITKLRDAAGTFHRSKMVMEQMATQYFKD 811
Query: 263 LYTEDP 280
++T DP
Sbjct: 812 MFTADP 817
>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1936
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L +GDRNTRFFH + NK+ L+D A S +S +E + ++F
Sbjct: 976 WLQRSRVNWLKEGDRNTRFFHSRAVWRAKKNKISKLRDENGAIHSTTSVLETMATEYFQG 1035
Query: 263 LYTEDPT 283
+Y DP+
Sbjct: 1036 VYKADPS 1042
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L +GDRNTRFFH + NK+ L+DA+ ++ +EQ+ D+F
Sbjct: 224 WLQRSRINWLKEGDRNTRFFHSKGVWRAKKNKISALRDASGTVHHLTNVMEQMATDYFKT 283
Query: 263 LYTEDP 280
L++ DP
Sbjct: 284 LFSADP 289
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L GD+N+ FFH +T R+ NK+V L+D WL + V LD+F A
Sbjct: 945 WHQRSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTA 1004
Query: 263 LY 268
LY
Sbjct: 1005 LY 1006
>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
Length = 1102
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L +GDRNTRFFH + N++ +L+D+ ++ +EQL ++F
Sbjct: 756 WLQRSRINWLKEGDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQE 815
Query: 263 LYTEDPT 283
+Y+ DP+
Sbjct: 816 VYSADPS 822
>gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
Length = 1765
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L D DRNT+FFH + NK+ L+DA + S + ++E + ++F
Sbjct: 811 WLQRSRVNWLKDEDRNTKFFHSRAVWRAKKNKISKLRDANETVHSSTMKLESMATEYFQD 870
Query: 263 LYTEDP 280
+YT DP
Sbjct: 871 VYTADP 876
>gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
Length = 787
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L +GDRNTRFFH + NK+ L+DA+ ++ +EQ+ D+F
Sbjct: 224 WLQRSRINWLKEGDRNTRFFHSKGVWRAKKNKISALRDASGTVHHLTNVMEQMATDYFKT 283
Query: 263 LYTEDP 280
L++ DP
Sbjct: 284 LFSADP 289
>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1469
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L +GDRNTRFFH + N++ +L+D+ ++ +EQL ++F
Sbjct: 749 WLQRSRINWLKEGDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQE 808
Query: 263 LYTEDPT 283
+Y+ DP+
Sbjct: 809 VYSADPS 815
>ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
gi|108862221|gb|ABA96496.2| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza
sativa Japonica Group]
Length = 1764
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L D DRNT+FFH + NK+ L+DA + S + ++E + ++F
Sbjct: 467 WLQRSRVNWLKDEDRNTKFFHSRAVWRAKKNKISKLRDANETVHSSTMKLESMATEYFQD 526
Query: 263 LYTEDP 280
+YT DP
Sbjct: 527 VYTADP 532
>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
Length = 2367
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 83 WFQKSRANFLLDGDRNTRFFHLSTAVHRRANKVVTLQDATDAWLSDSSQVEQLVLDFFVA 262
W Q+SR N+L D DRNT+FFH + NK+ L+DA + S + ++E + ++F
Sbjct: 1070 WLQRSRVNWLKDEDRNTKFFHSRAVWRAKKNKISKLRDANETVHSSTMKLESMATEYFQD 1129
Query: 263 LYTEDP 280
+YT DP
Sbjct: 1130 VYTADP 1135