BLASTX nr result
ID: Rheum21_contig00040241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040241
(565 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004304747.1| PREDICTED: pentatricopeptide repeat-containi... 138 1e-30
gb|EXB94227.1| hypothetical protein L484_004418 [Morus notabilis] 125 5e-27
gb|EMJ07978.1| hypothetical protein PRUPE_ppa025445mg [Prunus pe... 125 9e-27
ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containi... 122 8e-26
emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera] 122 8e-26
ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
gb|EOY11075.1| Mitochondrial editing factor 20 [Theobroma cacao] 114 2e-23
gb|ESW22006.1| hypothetical protein PHAVU_005G118500g [Phaseolus... 111 1e-22
ref|XP_006592781.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
ref|XP_006592780.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
gb|ESW22011.1| hypothetical protein PHAVU_005G119000g [Phaseolus... 109 5e-22
ref|XP_006432929.1| hypothetical protein CICLE_v10000988mg [Citr... 108 1e-21
ref|XP_002885286.1| pentatricopeptide repeat-containing protein ... 88 1e-15
ref|XP_006406547.1| hypothetical protein EUTSA_v10022209mg [Eutr... 88 2e-15
ref|NP_188527.2| mitochondrial editing factor 20 [Arabidopsis th... 86 8e-15
ref|XP_006299548.1| hypothetical protein CARUB_v10015722mg [Caps... 84 2e-14
ref|XP_004516355.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_002325053.2| hypothetical protein POPTR_0018s10010g [Popu... 67 3e-09
ref|XP_002531775.1| pentatricopeptide repeat-containing protein,... 67 3e-09
>ref|XP_004304747.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Fragaria vesca subsp. vesca]
Length = 476
Score = 138 bits (347), Expect = 1e-30
Identities = 73/145 (50%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Frame = -3
Query: 437 MSPIAELVTFSINQLKPKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLS-PKSAASY 261
M + L S+ LK KS Q+KQ HA IT +K+ + KLI++YC LS P+S + Y
Sbjct: 1 MHSLPRLRALSLLNLKLKSTHQLKQAHAQLITNGLKSTSIYGKLIQHYCALSDPESTSLY 60
Query: 260 AHRVLNQQDGGKLFLLNTLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPS 81
AH V D LFLLNTLI+ +QP+DS+ LF+NWVS + L FDD TY F LGACAR PS
Sbjct: 61 AHLVFKHFDEPNLFLLNTLIRCTQPKDSIFLFANWVSEASLCFDDFTYKFVLGACARLPS 120
Query: 80 NSALIEGKQIHARLVKEGMMLNLQV 6
L+ G++I AR+VKEG++ N+ V
Sbjct: 121 VPTLVVGREIQARIVKEGIISNILV 145
>gb|EXB94227.1| hypothetical protein L484_004418 [Morus notabilis]
Length = 466
Score = 125 bits (315), Expect = 5e-27
Identities = 65/131 (49%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Frame = -3
Query: 395 LKPKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLS-PKSAASYAHRVLNQQDGGKLF 219
LK KS+ Q+KQIH+ I + + L+ K+I+ Y S P + YAH V D +F
Sbjct: 15 LKLKSICQLKQIHSQLIVNGLNSPSLVAKVIQQYFTSSNPHNNYHYAHLVFKHFDKPNVF 74
Query: 218 LLNTLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHARL 39
LLNTLI+ SQP++++L+FSNWVSR L FDD TYIF LGACARSPS ++ G QIHAR+
Sbjct: 75 LLNTLIRCSQPKEAILVFSNWVSRGSLDFDDFTYIFVLGACARSPSVPSIWTGSQIHARI 134
Query: 38 VKEGMMLNLQV 6
++ G++ N+ V
Sbjct: 135 MRHGIVSNIMV 145
>gb|EMJ07978.1| hypothetical protein PRUPE_ppa025445mg [Prunus persica]
Length = 480
Score = 125 bits (313), Expect = 9e-27
Identities = 69/132 (52%), Positives = 90/132 (68%), Gaps = 2/132 (1%)
Frame = -3
Query: 395 LKPKSVKQIKQIHALSITADI-KTQYLLRKLIEYYCVLS-PKSAASYAHRVLNQQDGGKL 222
LK KS Q+K+ HA IT+ + K+ L KLI+ Y LS P+S YAH V D L
Sbjct: 15 LKLKSTHQLKRTHAQLITSGLLKSPTLYAKLIQQYGALSDPQSTNLYAHFVFKHFDEPNL 74
Query: 221 FLLNTLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHAR 42
FLLNTLI+ +QP+DS+L+F+NWVS++ L FDD TY F LGACAR PS S L+ G QIHAR
Sbjct: 75 FLLNTLIRCTQPKDSILVFANWVSKATLIFDDFTYKFVLGACARLPSVSTLLVGSQIHAR 134
Query: 41 LVKEGMMLNLQV 6
++K ++ N+ V
Sbjct: 135 IIKHDVVSNILV 146
>ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera] gi|298204853|emb|CBI34160.3| unnamed
protein product [Vitis vinifera]
Length = 471
Score = 122 bits (305), Expect = 8e-26
Identities = 69/148 (46%), Positives = 90/148 (60%)
Frame = -3
Query: 449 SQTAMSPIAELVTFSINQLKPKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSA 270
S M ++ L ++ KP S+ IKQ+HA IT + + LL KLI +YC S +
Sbjct: 2 SNLHMRSLSRLAFDTLLHFKPNSIHHIKQLHAHLITNAVSSPPLLAKLIHHYCAFS---S 58
Query: 269 ASYAHRVLNQQDGGKLFLLNTLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACAR 90
YA+ LFL NTLIK P S+L+F++WVSR L FDD TYIFALGACAR
Sbjct: 59 PHYAYTFFIHLRSPNLFLFNTLIKCLPPSSSILVFADWVSREALVFDDFTYIFALGACAR 118
Query: 89 SPSNSALIEGKQIHARLVKEGMMLNLQV 6
SPS L EG+QIHAR++K+G+ N+ V
Sbjct: 119 SPS---LWEGRQIHARILKQGVWSNVLV 143
>emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera]
Length = 437
Score = 122 bits (305), Expect = 8e-26
Identities = 69/148 (46%), Positives = 90/148 (60%)
Frame = -3
Query: 449 SQTAMSPIAELVTFSINQLKPKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSA 270
S M ++ L ++ KP S+ IKQ+HA IT + + LL KLI +YC S +
Sbjct: 2 SNLHMRSLSRLAFDTLLHFKPNSIHHIKQLHAHLITNAVSSPPLLAKLIHHYCAFS---S 58
Query: 269 ASYAHRVLNQQDGGKLFLLNTLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACAR 90
YA+ LFL NTLIK P S+L+F++WVSR L FDD TYIFALGACAR
Sbjct: 59 PHYAYTFFIHLRSPNLFLFNTLIKCLPPSSSILVFADWVSREALVFDDFTYIFALGACAR 118
Query: 89 SPSNSALIEGKQIHARLVKEGMMLNLQV 6
SPS L EG+QIHAR++K+G+ N+ V
Sbjct: 119 SPS---LWEGRQIHARILKQGVWSNVLV 143
>ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like isoform X1 [Glycine max]
gi|571502173|ref|XP_006594919.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18970-like isoform X2 [Glycine max]
Length = 477
Score = 116 bits (291), Expect = 3e-24
Identities = 64/128 (50%), Positives = 78/128 (60%)
Frame = -3
Query: 389 PKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLLN 210
PK IKQIHA IT +K+ KLIE+YC + AS AH V D LFL N
Sbjct: 18 PKLSYNIKQIHAQLITNGLKSPTFWAKLIEHYCGSPDQHIASNAHLVFQYFDKPDLFLFN 77
Query: 209 TLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHARLVKE 30
TLI+ QP D +L+F N SR + FD++TY F LGACARSPS S L G+Q+HAR+VK
Sbjct: 78 TLIRCVQPNDCILIFQNEFSRGLMYFDEYTYNFVLGACARSPSASTLWVGRQLHARIVKH 137
Query: 29 GMMLNLQV 6
G N+ V
Sbjct: 138 GFESNILV 145
>gb|EOY11075.1| Mitochondrial editing factor 20 [Theobroma cacao]
Length = 479
Score = 114 bits (284), Expect = 2e-23
Identities = 64/133 (48%), Positives = 78/133 (58%)
Frame = -3
Query: 404 INQLKPKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGK 225
+N P IKQIHA I +K L KLIE YC YA V Q D
Sbjct: 13 LNLKSPIPSHHIKQIHAQLIINGLKEPSFLAKLIENYCFSPSPQNTKYAQLVNKQFDTQS 72
Query: 224 LFLLNTLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHA 45
LFL NTL++ SQP+ S++ F+NWVS+ L FDD T+IF LGACARS S S L G+QIH
Sbjct: 73 LFLFNTLLRCSQPKVSIITFANWVSKGHLVFDDFTFIFVLGACARSHSLSTLWLGRQIHV 132
Query: 44 RLVKEGMMLNLQV 6
+ +K G+M NL V
Sbjct: 133 KALKFGVMSNLLV 145
>gb|ESW22006.1| hypothetical protein PHAVU_005G118500g [Phaseolus vulgaris]
Length = 465
Score = 111 bits (278), Expect = 1e-22
Identities = 60/128 (46%), Positives = 79/128 (61%)
Frame = -3
Query: 386 KSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLLNT 207
K + IKQIHA IT +K L KLIE+YC + AH V D LFL NT
Sbjct: 17 KESENIKQIHAQLITNGLKLPAFLAKLIEHYCGSPDSHITNNAHLVFQYFDKPDLFLFNT 76
Query: 206 LIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHARLVKEG 27
LI+ ++P DS+++F + SR L FDD+TY F LGACARSPS S L G+Q+H+ +VK G
Sbjct: 77 LIRCAKPNDSIIIFQDEFSRGLLFFDDYTYNFVLGACARSPSASTLWVGRQLHSLIVKHG 136
Query: 26 MMLNLQVA 3
+ N+ V+
Sbjct: 137 VGSNILVS 144
>ref|XP_006592781.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like isoform X2 [Glycine max]
Length = 450
Score = 110 bits (274), Expect = 3e-22
Identities = 62/128 (48%), Positives = 77/128 (60%)
Frame = -3
Query: 389 PKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLLN 210
PK IKQIHA IT +K KLIE+YC + A+ A V D LFL N
Sbjct: 36 PKLSYNIKQIHAQLITNGLKYPTFWAKLIEHYCGSPDQHIANNARLVFQYFDKPDLFLFN 95
Query: 209 TLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHARLVKE 30
TLI+ QP DS+L+F N SR + FD++TY F LGACARSPS S L G+Q+HA +VK
Sbjct: 96 TLIRCVQPNDSILIFRNEFSRGLMFFDEYTYNFVLGACARSPSASTLWVGRQLHALIVKH 155
Query: 29 GMMLNLQV 6
G+ N+ V
Sbjct: 156 GVESNIVV 163
>ref|XP_006592780.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like isoform X1 [Glycine max]
Length = 493
Score = 110 bits (274), Expect = 3e-22
Identities = 62/128 (48%), Positives = 77/128 (60%)
Frame = -3
Query: 389 PKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLLN 210
PK IKQIHA IT +K KLIE+YC + A+ A V D LFL N
Sbjct: 36 PKLSYNIKQIHAQLITNGLKYPTFWAKLIEHYCGSPDQHIANNARLVFQYFDKPDLFLFN 95
Query: 209 TLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHARLVKE 30
TLI+ QP DS+L+F N SR + FD++TY F LGACARSPS S L G+Q+HA +VK
Sbjct: 96 TLIRCVQPNDSILIFRNEFSRGLMFFDEYTYNFVLGACARSPSASTLWVGRQLHALIVKH 155
Query: 29 GMMLNLQV 6
G+ N+ V
Sbjct: 156 GVESNIVV 163
>gb|ESW22011.1| hypothetical protein PHAVU_005G119000g [Phaseolus vulgaris]
gi|561023282|gb|ESW22012.1| hypothetical protein
PHAVU_005G119000g [Phaseolus vulgaris]
Length = 476
Score = 109 bits (272), Expect = 5e-22
Identities = 60/128 (46%), Positives = 77/128 (60%)
Frame = -3
Query: 386 KSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLLNT 207
K K IKQIHA IT +K L KLIE YC + AH V D LFL NT
Sbjct: 19 KESKNIKQIHAQLITNGLKLPTFLAKLIENYCGSPDSHITNNAHLVFQYFDKPDLFLFNT 78
Query: 206 LIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHARLVKEG 27
LI+ ++P DS+ +F + SR + FDD+TY F LGACARSPS S L G+Q+H+ +VK G
Sbjct: 79 LIRCAKPNDSITIFRDEFSRGLMFFDDYTYNFVLGACARSPSASTLWVGRQLHSLIVKHG 138
Query: 26 MMLNLQVA 3
+ N+ V+
Sbjct: 139 VGSNILVS 146
>ref|XP_006432929.1| hypothetical protein CICLE_v10000988mg [Citrus clementina]
gi|568835223|ref|XP_006471678.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18970-like [Citrus sinensis]
gi|557535051|gb|ESR46169.1| hypothetical protein
CICLE_v10000988mg [Citrus clementina]
Length = 480
Score = 108 bits (269), Expect = 1e-21
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 5/136 (3%)
Frame = -3
Query: 395 LKPKSV---KQIKQIHALSITADIKTQYLLRKLIEYYCV--LSPKSAASYAHRVLNQQDG 231
LK K++ IKQIHA IT +K+ L +LI+ YC SP+S AH V D
Sbjct: 13 LKLKAITNPSHIKQIHAQLITNALKSPPLYAQLIQLYCTKKASPQST-KIAHFVFTHFDP 71
Query: 230 GKLFLLNTLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQI 51
LFL NTLI+ + P+DS+L+F+NWVS+ L FD TY+F LG+CAR S S L G+QI
Sbjct: 72 PNLFLFNTLIRCTPPQDSVLVFANWVSKGLLTFDYFTYVFELGSCARFCSLSTLWLGRQI 131
Query: 50 HARLVKEGMMLNLQVA 3
H + K G M N+ VA
Sbjct: 132 HVHVTKRGFMFNVLVA 147
>ref|XP_002885286.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331126|gb|EFH61545.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 471
Score = 88.2 bits (217), Expect = 1e-15
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = -3
Query: 386 KSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGK-LFLLN 210
K++ Q KQIHA + + L KLI +YC ++ AH ++ + G FL N
Sbjct: 19 KTLIQAKQIHAQLVINGCQDNSLFGKLIGHYCSKPSTESSKLAHLLVFPRFGHPDKFLFN 78
Query: 209 TLIKSSQPRDSLLLFSNWVSRSCLPF-DDHTYIFALGACARSPSNSALIEGKQIHARLVK 33
TL+K S+P DS+ +F+NW S+S L + ++ T++F LGACARS S+SAL G+ +H + K
Sbjct: 79 TLLKCSKPEDSIRIFTNWASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKK 138
Query: 32 EGMM 21
G +
Sbjct: 139 LGFL 142
>ref|XP_006406547.1| hypothetical protein EUTSA_v10022209mg [Eutrema salsugineum]
gi|557107693|gb|ESQ48000.1| hypothetical protein
EUTSA_v10022209mg [Eutrema salsugineum]
Length = 472
Score = 87.8 bits (216), Expect = 2e-15
Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Frame = -3
Query: 386 KSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHR-VLNQQDGGKLFLLN 210
K++ Q KQIHA + + L KLI +YC ++ AH V + FL N
Sbjct: 19 KTLIQAKQIHAQLVINGCQENSLFGKLIGHYCSKPSSESSKLAHSLVFPRFSNPDKFLFN 78
Query: 209 TLIKSSQPRDSLLLFSNWVSRSCLPF-DDHTYIFALGACARSPSN-SALIEGKQIHARLV 36
TL+K S+P DS+ +F+NW S+S L F ++ T++F LGACARS S+ SAL G+ +H +V
Sbjct: 79 TLLKCSKPEDSIRIFANWASKSSLLFLNERTFVFVLGACARSASSVSALRVGRIVHGMVV 138
Query: 35 KEGMM 21
K G++
Sbjct: 139 KLGLL 143
>ref|NP_188527.2| mitochondrial editing factor 20 [Arabidopsis thaliana]
gi|75273478|sp|Q9LJ69.1|PP243_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g18970 gi|9280314|dbj|BAB01693.1| unnamed protein
product [Arabidopsis thaliana]
gi|134031924|gb|ABO45699.1| At3g18970 [Arabidopsis
thaliana] gi|332642654|gb|AEE76175.1| mitochondrial
editing factor 20 [Arabidopsis thaliana]
Length = 472
Score = 85.5 bits (210), Expect = 8e-15
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Frame = -3
Query: 407 SINQLKPKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVL-SPKSAASYAHRVLNQQDG 231
S+ Q K++ Q KQIHA + L KLI +YC S +S++ AH ++ + G
Sbjct: 12 SLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFG 71
Query: 230 GK-LFLLNTLIKSSQPRDSLLLFSNWVSRSCLPF-DDHTYIFALGACARSPSNSALIEGK 57
FL NTL+K S+P DS+ +F+N+ S+S L + ++ T++F LGACARS S+SAL G+
Sbjct: 72 HPDKFLFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGR 131
Query: 56 QIHARLVKEGMM 21
+H + K G +
Sbjct: 132 IVHGMVKKLGFL 143
>ref|XP_006299548.1| hypothetical protein CARUB_v10015722mg [Capsella rubella]
gi|482568257|gb|EOA32446.1| hypothetical protein
CARUB_v10015722mg [Capsella rubella]
Length = 474
Score = 84.0 bits (206), Expect = 2e-14
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Frame = -3
Query: 386 KSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGK-LFLLN 210
K++ Q KQIHA I + L KLI YC ++ H ++ + G FL N
Sbjct: 19 KTLFQAKQIHAQLIINGCQDNSLFGKLIGQYCSKPSTESSKLTHLLVFPRFGHPDKFLFN 78
Query: 209 TLIKSSQPRDSLLLFSNWVSRSCLPF-DDHTYIFALGACARSPSNSALIEGKQIHARLVK 33
TL+K S+P DS+ +F++W S+S L + ++ T++F LGACARS S+SAL G+ +H + K
Sbjct: 79 TLLKCSKPEDSIRIFTSWASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKK 138
Query: 32 EGMM 21
G +
Sbjct: 139 LGFL 142
>ref|XP_004516355.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Cicer arietinum]
Length = 473
Score = 79.0 bits (193), Expect = 8e-13
Identities = 46/129 (35%), Positives = 65/129 (50%)
Frame = -3
Query: 392 KPKSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLL 213
KP + IKQIH+ I K KLI +Y ++SP S Y+ + + L L
Sbjct: 19 KPTNNNNIKQIHSQLIINGFKYPIFFAKLINHYSLISPNSNILYS--IFHHFHTPHLLLF 76
Query: 212 NTLIKSSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHARLVK 33
NT +K + S+ +F + + FD HT+ F LGACARSPS L G Q+H ++K
Sbjct: 77 NTFVKCTPLNHSIHIFKTHFIKKLIHFDHHTFNFILGACARSPSYPTLKLGTQLHTLIIK 136
Query: 32 EGMMLNLQV 6
G N+ V
Sbjct: 137 LGFCSNVLV 145
>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/132 (30%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Frame = -3
Query: 386 KSVKQIKQIHALSITADIKTQ-YLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLLN 210
KS KQ QIHA +I + Q + + +LI ++ +L K ++ + +Q D LF+ N
Sbjct: 20 KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWN 79
Query: 209 TLIK----SSQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHAR 42
T+I+ S PR++++L+ + +++ P ++ T+ F L +CAR S+L G ++H+
Sbjct: 80 TMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARL---SSLEPGHEVHSH 136
Query: 41 LVKEGMMLNLQV 6
++K G +L V
Sbjct: 137 IIKHGFESDLFV 148
>ref|XP_002325053.2| hypothetical protein POPTR_0018s10010g [Populus trichocarpa]
gi|550318436|gb|EEF03618.2| hypothetical protein
POPTR_0018s10010g [Populus trichocarpa]
Length = 595
Score = 67.0 bits (162), Expect = 3e-09
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Frame = -3
Query: 386 KSVKQIKQIHALSITADIKTQYLLRKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLLNT 207
K + Q+KQIHALS+ + + L S +YA+RV +Q D F+ N
Sbjct: 21 KDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHFSSLHDLNYAYRVFDQVDNPNSFMWNI 80
Query: 206 LIKSSQP-------RDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIH 48
LI++ R+++LL++ + RS D+HT+ F L ACA AL EGKQ H
Sbjct: 81 LIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACAYL---FALFEGKQAH 137
Query: 47 ARLVKEGMMLNLQV 6
A L+K G ++ +
Sbjct: 138 AHLLKLGFQSDVYI 151
>ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528611|gb|EEF30631.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 498
Score = 67.0 bits (162), Expect = 3e-09
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Frame = -3
Query: 374 QIKQIHALSITADIKTQYLL--RKLIEYYCVLSPKSAASYAHRVLNQQDGGKLFLLNTLI 201
+++Q+HA + + + + L R+L+E Y +S SYA + + +F+ NT+I
Sbjct: 3 EVRQLHAQFVVSGLLNHHSLCGRRLLESYVTMSE---ISYARSIFERIPYLDVFVYNTMI 59
Query: 200 KS----SQPRDSLLLFSNWVSRSCLPFDDHTYIFALGACARSPSNSALIEGKQIHARLVK 33
+ +P DSLLLF N + CL D++TY F L AC+ + AL EGKQ+H +++K
Sbjct: 60 RGLMLGKRPYDSLLLF-NELLLGCLKPDNYTYTFVLKACS---NQKALPEGKQVHCQIIK 115
Query: 32 EGMMLNLQV 6
G+ N +
Sbjct: 116 AGISPNTHI 124