BLASTX nr result
ID: Rheum21_contig00040163
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040163
(410 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278787.1| PREDICTED: protein TRANSPARENT TESTA 1-like ... 99 4e-19
emb|CBI27059.3| unnamed protein product [Vitis vinifera] 99 4e-19
ref|XP_004140390.1| PREDICTED: protein TRANSPARENT TESTA 1-like ... 94 2e-17
gb|EMJ28900.1| hypothetical protein PRUPE_ppa020013m2g, partial ... 91 2e-16
ref|XP_006484574.1| PREDICTED: protein TRANSPARENT TESTA 1-like ... 91 2e-16
ref|XP_006437731.1| hypothetical protein CICLE_v10033535mg [Citr... 91 2e-16
ref|XP_002314883.2| hypothetical protein POPTR_0010s13910g [Popu... 91 2e-16
gb|EXC29364.1| Protein TRANSPARENT TESTA 1 [Morus notabilis] 89 6e-16
gb|EOY02131.1| C2H2-like zinc finger protein [Theobroma cacao] 88 1e-15
gb|EXB49709.1| Protein TRANSPARENT TESTA 1 [Morus notabilis] 85 9e-15
gb|EPS60506.1| hypothetical protein M569_14297, partial [Genlise... 84 1e-14
ref|XP_003555454.1| PREDICTED: protein TRANSPARENT TESTA 1-like ... 84 1e-14
ref|XP_003535504.1| PREDICTED: protein TRANSPARENT TESTA 1-like ... 84 1e-14
ref|XP_001776296.1| predicted protein [Physcomitrella patens] gi... 84 1e-14
ref|NP_172787.1| protein DOT5 [Arabidopsis thaliana] gi|9958064... 84 3e-14
ref|XP_002892738.1| zinc finger family protein [Arabidopsis lyra... 84 3e-14
ref|XP_006304718.1| hypothetical protein CARUB_v10012013mg [Caps... 83 3e-14
gb|ESW25343.1| hypothetical protein PHAVU_003G027900g [Phaseolus... 82 7e-14
ref|XP_006417136.1| hypothetical protein EUTSA_v10009489mg [Eutr... 82 7e-14
ref|XP_004513518.1| PREDICTED: protein TRANSPARENT TESTA 1-like ... 82 7e-14
>ref|XP_002278787.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Vitis vinifera]
Length = 273
Score = 99.4 bits (246), Expect = 4e-19
Identities = 56/122 (45%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Frame = -2
Query: 364 SSDQSACXXXXXXXXXXXXXXXGPPGRNLSSCCTSIDVNIAPEEATKAAVGYDGAASVTV 185
SS +SAC PPG++ S + P+ + VTV
Sbjct: 10 SSSESACLEADEEDEDSILLSLCPPGQSTSKRAIYHPSSSKPQNYQNT----NREDGVTV 65
Query: 184 ALHIGPPSAAASTSRP-----------QYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQ 38
ALHIGPP+A ASTS P QYWIPSPAQILVGPTQFSC+VC+KTFNR+NNMQ
Sbjct: 66 ALHIGPPNACASTSNPNNINGGDPVEGQYWIPSPAQILVGPTQFSCTVCNKTFNRYNNMQ 125
Query: 37 VN 32
++
Sbjct: 126 MH 127
>emb|CBI27059.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 99.4 bits (246), Expect = 4e-19
Identities = 56/122 (45%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Frame = -2
Query: 364 SSDQSACXXXXXXXXXXXXXXXGPPGRNLSSCCTSIDVNIAPEEATKAAVGYDGAASVTV 185
SS +SAC PPG++ S + P+ + VTV
Sbjct: 10 SSSESACLEADEEDEDSILLSLCPPGQSTSKRAIYHPSSSKPQNYQNT----NREDGVTV 65
Query: 184 ALHIGPPSAAASTSRP-----------QYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQ 38
ALHIGPP+A ASTS P QYWIPSPAQILVGPTQFSC+VC+KTFNR+NNMQ
Sbjct: 66 ALHIGPPNACASTSNPNNINGGDPVEGQYWIPSPAQILVGPTQFSCTVCNKTFNRYNNMQ 125
Query: 37 VN 32
++
Sbjct: 126 MH 127
>ref|XP_004140390.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis sativus]
Length = 286
Score = 94.0 bits (232), Expect = 2e-17
Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 8/119 (6%)
Frame = -2
Query: 364 SSDQSACXXXXXXXXXXXXXXXGPPGRNLSSCCTSIDVNIAPEEATKAAVG---YDGAAS 194
SS +SAC PPG+ +S + I P + + ++ A+
Sbjct: 11 SSSESACLEGDEEGEESIFLSLSPPGQR-TSFSSKQQQTIYPNSSLQNPNNDNNHENGAA 69
Query: 193 VTVALHIGPPSAAASTS----RP-QYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQVN 32
VTVA+HIGPP A S++ RP YWIP+PAQILVGPTQFSCSVC+KTFNR+NNMQ++
Sbjct: 70 VTVAMHIGPPPALLSSTPAAVRPLDYWIPTPAQILVGPTQFSCSVCTKTFNRYNNMQMH 128
>gb|EMJ28900.1| hypothetical protein PRUPE_ppa020013m2g, partial [Prunus persica]
Length = 241
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/59 (77%), Positives = 49/59 (83%)
Frame = -2
Query: 208 DGAASVTVALHIGPPSAAASTSRPQYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQVN 32
DGA VTVALHIGPPS S QYWIPSPAQILVGPTQFSC VCSKTFNR+NNMQ++
Sbjct: 47 DGA--VTVALHIGPPS-----SEGQYWIPSPAQILVGPTQFSCPVCSKTFNRYNNMQMH 98
>ref|XP_006484574.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Citrus sinensis]
Length = 296
Score = 90.5 bits (223), Expect = 2e-16
Identities = 52/102 (50%), Positives = 61/102 (59%), Gaps = 14/102 (13%)
Frame = -2
Query: 295 PPGRNLSSCCTSIDVNIAPEEATKAAVGYDGAASVTVALHIGPPSA--AASTSRP----- 137
PPG+ +S TS + + G VTVALHIGPP+A A STS P
Sbjct: 37 PPGQRVSKNSTSNQLLAHNNNHQNPTSHHSG---VTVALHIGPPTAEAAGSTSNPTPNDI 93
Query: 136 -------QYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQVN 32
QYWIPSP QILVGPTQFSC VC+KTFNR+NNMQ++
Sbjct: 94 VNKLVEGQYWIPSPEQILVGPTQFSCPVCNKTFNRYNNMQMH 135
>ref|XP_006437731.1| hypothetical protein CICLE_v10033535mg [Citrus clementina]
gi|557539927|gb|ESR50971.1| hypothetical protein
CICLE_v10033535mg [Citrus clementina]
Length = 296
Score = 90.5 bits (223), Expect = 2e-16
Identities = 52/102 (50%), Positives = 61/102 (59%), Gaps = 14/102 (13%)
Frame = -2
Query: 295 PPGRNLSSCCTSIDVNIAPEEATKAAVGYDGAASVTVALHIGPPSA--AASTSRP----- 137
PPG+ +S TS + + G VTVALHIGPP+A A STS P
Sbjct: 37 PPGQRVSKHSTSNQLLAHNNNHQNPTSHHSG---VTVALHIGPPTAEAAGSTSNPTPNDI 93
Query: 136 -------QYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQVN 32
QYWIPSP QILVGPTQFSC VC+KTFNR+NNMQ++
Sbjct: 94 VNKLVEGQYWIPSPEQILVGPTQFSCPVCNKTFNRYNNMQMH 135
>ref|XP_002314883.2| hypothetical protein POPTR_0010s13910g [Populus trichocarpa]
gi|550329762|gb|EEF01054.2| hypothetical protein
POPTR_0010s13910g [Populus trichocarpa]
Length = 275
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 11/67 (16%)
Frame = -2
Query: 199 ASVTVALHIGPPSAAASTSRP-----------QYWIPSPAQILVGPTQFSCSVCSKTFNR 53
+ VT+ALHIGPP+A A TS QYWIPSPAQILVGPTQF+CSVC+KTFNR
Sbjct: 65 SGVTIALHIGPPTAGARTSNHPDNHIGSLVEGQYWIPSPAQILVGPTQFTCSVCNKTFNR 124
Query: 52 FNNMQVN 32
+NNMQ++
Sbjct: 125 YNNMQMH 131
>gb|EXC29364.1| Protein TRANSPARENT TESTA 1 [Morus notabilis]
Length = 297
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/64 (70%), Positives = 50/64 (78%), Gaps = 10/64 (15%)
Frame = -2
Query: 193 VTVALHIGPPSAAASTSRP----------QYWIPSPAQILVGPTQFSCSVCSKTFNRFNN 44
VTVALHIGPP+A S RP QYWIPSPAQILVGPTQFSCSVC+KTFNR+NN
Sbjct: 77 VTVALHIGPPNAG-SVVRPNHSGGPPIESQYWIPSPAQILVGPTQFSCSVCNKTFNRYNN 135
Query: 43 MQVN 32
MQ++
Sbjct: 136 MQMH 139
>gb|EOY02131.1| C2H2-like zinc finger protein [Theobroma cacao]
Length = 291
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 11/67 (16%)
Frame = -2
Query: 199 ASVTVALHIGPPSAAASTSRP-----------QYWIPSPAQILVGPTQFSCSVCSKTFNR 53
+ VTVALHIGPP+ S+S QYWIPSPAQILVGPTQFSC+VC+KTFNR
Sbjct: 68 SGVTVALHIGPPAIETSSSNSNDIRSNKLVEGQYWIPSPAQILVGPTQFSCAVCNKTFNR 127
Query: 52 FNNMQVN 32
+NNMQ++
Sbjct: 128 YNNMQMH 134
>gb|EXB49709.1| Protein TRANSPARENT TESTA 1 [Morus notabilis]
Length = 259
Score = 85.1 bits (209), Expect = 9e-15
Identities = 44/64 (68%), Positives = 49/64 (76%), Gaps = 10/64 (15%)
Frame = -2
Query: 193 VTVALHIGPPSAAASTSRP----------QYWIPSPAQILVGPTQFSCSVCSKTFNRFNN 44
VTVALHIGPP+A S RP QYWIPS AQILVGPTQFSCSVC+KTFNR+NN
Sbjct: 46 VTVALHIGPPNAG-SVVRPNHSGGPPIESQYWIPSLAQILVGPTQFSCSVCNKTFNRYNN 104
Query: 43 MQVN 32
MQ++
Sbjct: 105 MQMH 108
>gb|EPS60506.1| hypothetical protein M569_14297, partial [Genlisea aurea]
Length = 207
Score = 84.3 bits (207), Expect = 1e-14
Identities = 42/61 (68%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Frame = -2
Query: 205 GAASVTVALHIGPPSAAASTSRP---QYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQV 35
G + VTVALHIG S S P YWIPSPAQILVGPTQFSC VC+KTFNRFNNMQ+
Sbjct: 5 GESGVTVALHIGLTPNGVSDSGPCEMGYWIPSPAQILVGPTQFSCPVCAKTFNRFNNMQM 64
Query: 34 N 32
+
Sbjct: 65 H 65
>ref|XP_003555454.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
Length = 274
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 6/65 (9%)
Frame = -2
Query: 208 DGAASVTVALHIGPPSAAAST--SRP----QYWIPSPAQILVGPTQFSCSVCSKTFNRFN 47
D + VTVALHIG P+ A+T S P +YWIP+P QIL+GPTQFSC+VC+KTFNRFN
Sbjct: 66 DDLSGVTVALHIGLPTPTAATKPSSPPIHGRYWIPTPQQILIGPTQFSCTVCNKTFNRFN 125
Query: 46 NMQVN 32
NMQ++
Sbjct: 126 NMQMH 130
>ref|XP_003535504.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
Length = 273
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
Frame = -2
Query: 208 DGAASVTVALHIGPPSAAASTSRP---QYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQ 38
D + VTVALHIG P+ S+ P +YWIP+P QIL+GPTQFSC+VC+KTFNRFNNMQ
Sbjct: 66 DLISGVTVALHIGLPTTKPSSPTPIHCRYWIPTPQQILIGPTQFSCTVCNKTFNRFNNMQ 125
Query: 37 VN 32
++
Sbjct: 126 MH 127
>ref|XP_001776296.1| predicted protein [Physcomitrella patens]
gi|162672391|gb|EDQ58929.1| predicted protein
[Physcomitrella patens]
Length = 233
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 13/68 (19%)
Frame = -2
Query: 196 SVTVALHIGPPSA-AASTSRP------------QYWIPSPAQILVGPTQFSCSVCSKTFN 56
+VTVALHIGPPS+ A S SR +YWIP+PAQILVGPTQFSC VC+KTFN
Sbjct: 20 NVTVALHIGPPSSDAMSMSRERLQRGRGRLLEGEYWIPTPAQILVGPTQFSCPVCNKTFN 79
Query: 55 RFNNMQVN 32
R+NNMQ++
Sbjct: 80 RYNNMQMH 87
>ref|NP_172787.1| protein DOT5 [Arabidopsis thaliana]
gi|9958064|gb|AAG09553.1|AC011810_12 hypothetical
protein, similar to zinc finger proteins [Arabidopsis
thaliana] gi|18376496|emb|CAC86166.1| WIP6 protein
[Arabidopsis thaliana] gi|332190874|gb|AEE28995.1|
C2H2-like zinc finger protein [Arabidopsis thaliana]
Length = 302
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 12/66 (18%)
Frame = -2
Query: 193 VTVALHIGPPSAAAST------------SRPQYWIPSPAQILVGPTQFSCSVCSKTFNRF 50
VTVALHIGPPS+ T + QYWIPS +QILVGPTQFSCSVC+KTFNRF
Sbjct: 54 VTVALHIGPPSSDKETLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRF 113
Query: 49 NNMQVN 32
NNMQ++
Sbjct: 114 NNMQMH 119
>ref|XP_002892738.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338580|gb|EFH68997.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 303
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 12/66 (18%)
Frame = -2
Query: 193 VTVALHIGPPSAAAST------------SRPQYWIPSPAQILVGPTQFSCSVCSKTFNRF 50
VTVALHIGPPS+ T + QYWIPS +QILVGPTQFSCSVC+KTFNRF
Sbjct: 54 VTVALHIGPPSSDKETLTGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRF 113
Query: 49 NNMQVN 32
NNMQ++
Sbjct: 114 NNMQMH 119
>ref|XP_006304718.1| hypothetical protein CARUB_v10012013mg [Capsella rubella]
gi|482573429|gb|EOA37616.1| hypothetical protein
CARUB_v10012013mg [Capsella rubella]
Length = 305
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/101 (47%), Positives = 60/101 (59%), Gaps = 13/101 (12%)
Frame = -2
Query: 295 PPGRNLSSCCTSIDVNIAPEEATKAAVGYDGAASVTVALHIGPPSA------------AA 152
PPG S+ + P + + + VTVALHIGPP++ A
Sbjct: 22 PPGHQYSTSHNKA-ASTKPSSNHEFNLPSTNPSGVTVALHIGPPNSDKETLAGGNNQEAG 80
Query: 151 STSRP-QYWIPSPAQILVGPTQFSCSVCSKTFNRFNNMQVN 32
T+R QYWIPS +QILVGPTQFSCSVC+KTFNRFNNMQ++
Sbjct: 81 LTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMH 121
>gb|ESW25343.1| hypothetical protein PHAVU_003G027900g [Phaseolus vulgaris]
Length = 308
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 17/76 (22%)
Frame = -2
Query: 208 DGAASVTVALHIGPPSAAASTSRP-----------------QYWIPSPAQILVGPTQFSC 80
D VTVALHIG P+ S + P QYWIPSPAQIL+GPTQFSC
Sbjct: 68 DDQRGVTVALHIGLPNPTTSPNSPTPISKPDLHLTSTPIQGQYWIPSPAQILIGPTQFSC 127
Query: 79 SVCSKTFNRFNNMQVN 32
+VC+K FNRFNNMQ++
Sbjct: 128 TVCNKMFNRFNNMQMH 143
>ref|XP_006417136.1| hypothetical protein EUTSA_v10009489mg [Eutrema salsugineum]
gi|557094907|gb|ESQ35489.1| hypothetical protein
EUTSA_v10009489mg [Eutrema salsugineum]
Length = 316
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 12/66 (18%)
Frame = -2
Query: 193 VTVALHIGPPSAAASTS------------RPQYWIPSPAQILVGPTQFSCSVCSKTFNRF 50
VTVALHIGPP + T+ + QYWIPS +QILVGPTQFSCSVC+KTFNRF
Sbjct: 61 VTVALHIGPPVSDKETTTGGSNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRF 120
Query: 49 NNMQVN 32
NNMQ++
Sbjct: 121 NNMQMH 126
>ref|XP_004513518.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Cicer arietinum]
Length = 298
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 10/69 (14%)
Frame = -2
Query: 208 DGAASVTVALHIGPPSAAASTS----------RPQYWIPSPAQILVGPTQFSCSVCSKTF 59
D + VTVALHIG P+ S + + QYWIPSPAQIL+GPTQFSC+VC+K F
Sbjct: 64 DDQSGVTVALHIGLPTTNISQNNIPINKPDPIQGQYWIPSPAQILIGPTQFSCTVCNKMF 123
Query: 58 NRFNNMQVN 32
NRFNNMQ++
Sbjct: 124 NRFNNMQMH 132