BLASTX nr result
ID: Rheum21_contig00040074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00040074
(412 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ06863.1| hypothetical protein PRUPE_ppa009465mg [Prunus pe... 179 4e-43
ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containi... 174 1e-41
gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis] 172 4e-41
ref|XP_002533822.1| pentatricopeptide repeat-containing protein,... 171 9e-41
ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citr... 169 3e-40
ref|XP_002309173.2| pentatricopeptide repeat-containing family p... 166 3e-39
ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ... 164 9e-39
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi... 163 2e-38
gb|EOY07026.1| Pentatricopeptide repeat superfamily protein, put... 160 2e-37
gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus... 159 4e-37
gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus... 157 1e-36
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi... 156 3e-36
gb|AHB18409.1| pentatricopeptide repeat-containing protein [Goss... 154 2e-35
emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera] 153 2e-35
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi... 151 8e-35
ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutr... 145 7e-33
ref|NP_181376.3| pentatricopeptide repeat-containing protein [Ar... 140 2e-31
gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|3137637... 140 2e-31
ref|XP_002879744.1| pentatricopeptide repeat-containing protein ... 139 5e-31
ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Caps... 135 4e-30
>gb|EMJ06863.1| hypothetical protein PRUPE_ppa009465mg [Prunus persica]
Length = 291
Score = 179 bits (453), Expect = 4e-43
Identities = 81/134 (60%), Positives = 105/134 (78%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
YS VI +VKQGRG++AL+VL +MK EGIKP I+CYTM L GVI GD++ A++LFDE+L
Sbjct: 56 YSNVIRYMVKQGRGLDALNVLVKMKVEGIKPDIVCYTMVLHGVIAEGDYKNADELFDELL 115
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ GLVPD++TYNVY+NGLCKQ V+ G KMI ME+LGCKP+ +TYN +L C + E
Sbjct: 116 LLGLVPDVYTYNVYVNGLCKQNKVKDGLKMISSMEELGCKPNLITYNILLKGLCNTGELS 175
Query: 50 RAREVFAEMKLKGV 9
RARE+ +EM LKG+
Sbjct: 176 RARELVSEMTLKGI 189
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/135 (27%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ +N L KQ + + L ++ M+ G KP++I Y + L+G+ G+ RA +L E+
Sbjct: 126 YNVYVNGLCKQNKVKDGLKMISSMEELGCKPNLITYNILLKGLCNTGELSRARELVSEMT 185
Query: 230 VFGLVPDIHTYNVYINGLCKQGSV-EAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREF 54
+ G+ ++ T+ + ++GL QG + EA M +++ C+ S +++ ++ CR
Sbjct: 186 LKGIGVNLQTHRIMLDGLFGQGDIDEACIFMDEMLDKFLCRFCS-SFDEVIYGLCRKGLV 244
Query: 53 CRAREVFAEMKLKGV 9
C+A ++ +M K V
Sbjct: 245 CKAMDLLKKMVDKNV 259
>ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 491
Score = 174 bits (440), Expect = 1e-41
Identities = 80/134 (59%), Positives = 105/134 (78%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
YS VI LVKQG+G++AL VL +MK EG+KP I+CYTM L GVI GD++ A+ +FDE+L
Sbjct: 253 YSNVIRCLVKQGKGLDALRVLCKMKVEGMKPDIVCYTMVLYGVIANGDYKNADKVFDELL 312
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
V GLVPD++TYNVYINGLC Q +VEAG KMI M++LGC+P+ +TYN +L + C++ E
Sbjct: 313 VLGLVPDVYTYNVYINGLCNQNNVEAGIKMITCMDELGCRPNLITYNLLLKALCKNEELS 372
Query: 50 RAREVFAEMKLKGV 9
RARE+ +EM L GV
Sbjct: 373 RARELVSEMTLNGV 386
>gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]
Length = 494
Score = 172 bits (436), Expect = 4e-41
Identities = 75/133 (56%), Positives = 105/133 (78%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
YS VI +LV++ RG+EALD+LG+MKA+G+KP ++CYTM L G++ G++ +A+++FDE+L
Sbjct: 254 YSKVIRILVREKRGLEALDILGQMKADGMKPDVVCYTMVLHGIVAEGEYSKADEMFDEML 313
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
V GLVPD++TYN YINGLCKQ V+ I ME+LGCKP+ +TYN IL + C++ EF
Sbjct: 314 VLGLVPDVYTYNAYINGLCKQNDVDGALDTILRMEELGCKPNLITYNLILRALCKNGEFG 373
Query: 50 RAREVFAEMKLKG 12
RA+E+ AEM LKG
Sbjct: 374 RAKELVAEMSLKG 386
>ref|XP_002533822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526239|gb|EEF28557.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 373
Score = 171 bits (433), Expect = 9e-41
Identities = 78/134 (58%), Positives = 105/134 (78%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
YS VIN LV++G GMEAL+VL +MK +GIKP I+CYT L GVI G + +A++LFDE+L
Sbjct: 131 YSKVINFLVRRGMGMEALNVLNQMKLDGIKPDIVCYTTVLNGVIANGVYSKADELFDELL 190
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
VFGLVPD++TYNVYI GLCKQ +VEAG +M+ ME+LGCKP+ +TYN +L+ C++ E
Sbjct: 191 VFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNILLEDLCKNGEDS 250
Query: 50 RAREVFAEMKLKGV 9
RAR++ +M KG+
Sbjct: 251 RARDLVRDMGSKGI 264
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/135 (24%), Positives = 65/135 (48%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ I L KQ ++++ M+ G KP++I Y + L + + G+ RA DL ++
Sbjct: 201 YNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNILLEDLCKNGEDSRARDLVRDMG 260
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
G+ + TY V I+GL G + ++ G P + ++ ++ C++ C
Sbjct: 261 SKGIGLGMQTYKVMIHGLTSGGKIVKACSLLEEALDKGLCPRGLRFDEVIYGLCQTGSIC 320
Query: 50 RAREVFAEMKLKGVN 6
+A E+ ++ K V+
Sbjct: 321 KALELLEKVVNKNVS 335
>ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citrus clementina]
gi|557531581|gb|ESR42764.1| hypothetical protein
CICLE_v10013613mg [Citrus clementina]
Length = 506
Score = 169 bits (429), Expect = 3e-40
Identities = 80/134 (59%), Positives = 103/134 (76%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ VI LVK+ + +AL +L +MK++GIKP I+CYTM L GVI D+ +AE+LFDE+L
Sbjct: 262 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 321
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
V GLVPD++TYNVYINGLCKQ +VEAG KMI ME+LG KPD +TYNT+L + C+ RE
Sbjct: 322 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 381
Query: 50 RAREVFAEMKLKGV 9
R RE+ EMK KG+
Sbjct: 382 RLRELVKEMKWKGI 395
>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550335936|gb|EEE92696.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 490
Score = 166 bits (420), Expect = 3e-39
Identities = 78/134 (58%), Positives = 100/134 (74%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
YS VI LVK RG++AL VL MK++ IKP I CYTM L GVIE D+ +A++LFDE+L
Sbjct: 259 YSNVIRFLVKGKRGLDALHVLNHMKSDRIKPDIFCYTMVLHGVIEDKDYLKADELFDELL 318
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
VFGLVPD +TYNVYINGLCKQ +V+AG KM+ ME+LGCKP+ +TYN ++ C+ E
Sbjct: 319 VFGLVPDAYTYNVYINGLCKQNNVQAGIKMVASMEELGCKPNLITYNMLVKQLCKVGELS 378
Query: 50 RAREVFAEMKLKGV 9
+A E+ EM LKG+
Sbjct: 379 KAGELVREMGLKGI 392
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/130 (24%), Positives = 63/130 (48%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ IN L KQ + ++ M+ G KP++I Y M ++ + + G+ +A +L E+
Sbjct: 329 YNVYINGLCKQNNVQAGIKMVASMEELGCKPNLITYNMLVKQLCKVGELSKAGELVREMG 388
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ G+ ++ TY + I+GL G + + G S+ ++ I+ C C
Sbjct: 389 LKGIGLNMQTYRIMIDGLASNGKIVEACGLFEEALDKGLCTQSLMFDEIICGLCHRDLSC 448
Query: 50 RAREVFAEMK 21
+A ++ +MK
Sbjct: 449 KALKLLEKMK 458
>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498545|gb|AES79748.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 653
Score = 164 bits (416), Expect = 9e-39
Identities = 71/133 (53%), Positives = 104/133 (78%)
Frame = -3
Query: 407 STVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEILV 228
+ +I LVK+G+GM+AL++L ++K +GIKP I+CYT+ L G+++ GD+ + ++LFDEILV
Sbjct: 259 TNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVKLDELFDEILV 318
Query: 227 FGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFCR 48
GLVPD++TYNVYINGLCKQ + + K++ ME+LGCKP+ VTYNT+L + C S + +
Sbjct: 319 LGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGK 378
Query: 47 AREVFAEMKLKGV 9
A+ V EM+LKGV
Sbjct: 379 AKRVMKEMRLKGV 391
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/115 (27%), Positives = 61/115 (53%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ IN L KQ EAL ++ M+ G KP+++ Y L + GD +A+ + E+
Sbjct: 328 YNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMR 387
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCR 66
+ G+ ++HTY + ++GL +G + ++ M + P S T+++I+ C+
Sbjct: 388 LKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDSIVHQMCQ 442
>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
gi|449483740|ref|XP_004156675.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
Length = 491
Score = 163 bits (413), Expect = 2e-38
Identities = 76/134 (56%), Positives = 103/134 (76%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
YS VI V +G G +A+D+L +MKA+G KP I+CYTM L GVI GD++ A++LFDE+L
Sbjct: 254 YSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDELL 313
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+FGLVPDI+TYNVYI+GLCKQG AG +MI ME LGC+P+ +TYN IL S C++ E
Sbjct: 314 LFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKTGELD 373
Query: 50 RAREVFAEMKLKGV 9
AR++ ++M+LKG+
Sbjct: 374 EARKLRSKMQLKGL 387
>gb|EOY07026.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 542
Score = 160 bits (405), Expect = 2e-37
Identities = 74/134 (55%), Positives = 100/134 (74%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ +I LVK+GRG++ALD L +MK+ GIKP I+ YTMAL GVI GD+ A++LFDE+L
Sbjct: 300 YNCLIRFLVKKGRGLDALDFLNQMKSVGIKPGIVSYTMALNGVIAEGDYMLADELFDELL 359
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ GLVPD++TYN YI+ LCKQ VE G KM+ ME+L CKP+ +TYN +L++ C+ E
Sbjct: 360 MLGLVPDVYTYNAYIDALCKQNKVEEGIKMVACMEELRCKPNVLTYNMLLEAICKVGEIS 419
Query: 50 RAREVFAEMKLKGV 9
RA E+ EMK KG+
Sbjct: 420 RAMELVKEMKYKGI 433
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/135 (23%), Positives = 67/135 (49%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ I+ L KQ + E + ++ M+ KP+++ Y M L + + G+ RA +L E+
Sbjct: 370 YNAYIDALCKQNKVEEGIKMVACMEELRCKPNVLTYNMLLEAICKVGEISRAMELVKEMK 429
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
G+ ++ +Y V I+GL +G + + ++ + S+ ++ ++ C+ C
Sbjct: 430 YKGIEMNLVSYTVIIDGLVSKGEILEAHGLVEEVLHKCFCHQSLAFDEVICGLCQRGLVC 489
Query: 50 RAREVFAEMKLKGVN 6
A E+ +M K V+
Sbjct: 490 EALELLRKMVAKNVS 504
>gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus vulgaris]
Length = 513
Score = 159 bits (402), Expect = 4e-37
Identities = 72/134 (53%), Positives = 100/134 (74%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ +I LVK+G+GM+ALD+L + K +GIKP ++CYTM L G+I G++ + E+LFDEIL
Sbjct: 261 YTNMIRFLVKEGKGMDALDILNQQKKDGIKPDVVCYTMVLSGIIAEGEYVKLEELFDEIL 320
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
VFGLVPD++TYNVYINGLCKQ +V+ K++ ME+L CKP+ VT N +L + C + +
Sbjct: 321 VFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELECKPNVVTCNILLGALCVAGDLR 380
Query: 50 RAREVFAEMKLKGV 9
+AR V EM KGV
Sbjct: 381 KARGVMKEMGWKGV 394
>gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus vulgaris]
Length = 514
Score = 157 bits (398), Expect = 1e-36
Identities = 70/134 (52%), Positives = 100/134 (74%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ +I LVK+G+G +ALD+L + K +GIKP ++CYTM L G++ G++ + E+LFDEIL
Sbjct: 261 YTNMIRFLVKEGKGTDALDILNQQKKDGIKPDVVCYTMVLSGIVAEGEYVKLEELFDEIL 320
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
VFGLVPD++TYNVYINGLCKQ +V+ K++ ME+L C+P+ VT NT+L + C + +
Sbjct: 321 VFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELECRPNVVTCNTLLGALCVAGDLR 380
Query: 50 RAREVFAEMKLKGV 9
+AR V EM KGV
Sbjct: 381 KARGVMKEMGWKGV 394
>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Vitis vinifera]
Length = 505
Score = 156 bits (394), Expect = 3e-36
Identities = 72/135 (53%), Positives = 95/135 (70%)
Frame = -3
Query: 407 STVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEILV 228
+ VI LVK+G M+AL V +MK +GIKP + YTM L GV GD+ +A+DLFDE+LV
Sbjct: 260 NNVIRFLVKEGMVMDALGVFDQMKTDGIKPDTVSYTMILNGVTADGDYEKADDLFDEMLV 319
Query: 227 FGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFCR 48
G+VPDIH YNVYIN LCKQ ++E G +M+ M +LGCKPD VTYN +L+ + R+
Sbjct: 320 LGVVPDIHAYNVYINSLCKQNNIEEGVRMLASMRELGCKPDYVTYNMLLEGMSKVRDLGG 379
Query: 47 AREVFAEMKLKGVNW 3
RE+ EM+L+GV W
Sbjct: 380 MRELAREMELEGVQW 394
>gb|AHB18409.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 480
Score = 154 bits (388), Expect = 2e-35
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y V+ LVK+GRG++A DVL +MK++GI P II YTM L GV GD+ A++LFDE+L
Sbjct: 251 YDGVVRFLVKKGRGLDAWDVLNQMKSDGIMPGIISYTMVLNGVTAEGDYILADELFDELL 310
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ GLVP+++TY YI+ LCKQ VE G KM+ ME+LGCKP+ + YNT+L + ++ E
Sbjct: 311 MLGLVPNVYTYKAYIDALCKQNKVEEGIKMVACMEELGCKPNVLIYNTLLRTISKAGEIS 370
Query: 50 RAREVFAEMKLKGV--NW 3
RARE+ EMK KG+ NW
Sbjct: 371 RARELVKEMKYKGIEMNW 388
>emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]
Length = 390
Score = 153 bits (387), Expect = 2e-35
Identities = 71/135 (52%), Positives = 94/135 (69%)
Frame = -3
Query: 407 STVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEILV 228
+ VI LVK+G M+AL V +MK +GIKP + YTM L GV GD+ +A+DLFDE+LV
Sbjct: 213 NNVIXFLVKEGMVMDALGVFDQMKTDGIKPDTVSYTMILNGVTADGDYEKADDLFDEMLV 272
Query: 227 FGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFCR 48
G+VPDIH YNVYIN LCKQ ++E G +M+ M +LGCKPD V YN +L+ + R+
Sbjct: 273 LGVVPDIHAYNVYINSLCKQNNIEEGVRMLASMRELGCKPDYVXYNMLLEGMSKVRDLGG 332
Query: 47 AREVFAEMKLKGVNW 3
RE+ EM+L+GV W
Sbjct: 333 MRELAREMELEGVQW 347
>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Glycine max]
Length = 499
Score = 151 bits (382), Expect = 8e-35
Identities = 68/134 (50%), Positives = 98/134 (73%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ +I LVK+GRGM+ALD+L + K +GIK ++ YTM L G++ G++ ++LFDE+L
Sbjct: 264 YTNMIRFLVKEGRGMDALDILNQQKQDGIKLDVVSYTMVLSGIVAEGEYVMLDELFDEML 323
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
V GL+PD +TYNVYINGLCKQ +V +++ ME+LGCKP+ VTYNT+L + + +F
Sbjct: 324 VIGLIPDAYTYNVYINGLCKQNNVAEALQIVASMEELGCKPNVVTYNTLLGALSVAGDFV 383
Query: 50 RAREVFAEMKLKGV 9
+ARE+ EM KGV
Sbjct: 384 KARELMKEMGWKGV 397
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/132 (28%), Positives = 67/132 (50%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ IN L KQ EAL ++ M+ G KP+++ Y L + GDF +A +L E+
Sbjct: 334 YNVYINGLCKQNNVAEALQIVASMEELGCKPNVVTYNTLLGALSVAGDFVKARELMKEMG 393
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
G+ ++HTY + ++GL +G + ++ M + P S T++ I+ C+ F
Sbjct: 394 WKGVGLNLHTYRIVLDGLVGKGEIGESCLLLEEMLEKCLFPRSSTFDNIIFQMCQKDLFT 453
Query: 50 RAREVFAEMKLK 15
A E+ ++ K
Sbjct: 454 EAMELTKKVVAK 465
>ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutrema salsugineum]
gi|557112223|gb|ESQ52507.1| hypothetical protein
EUTSA_v10017948mg [Eutrema salsugineum]
Length = 456
Score = 145 bits (365), Expect = 7e-33
Identities = 65/135 (48%), Positives = 99/135 (73%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ V+ LV+ GRG E + VL +MK + I+P I+CYT+ L+GVI D+++A+ LFDE+L
Sbjct: 257 YTAVMRFLVEGGRGKEVVSVLNQMKCDRIEPDIVCYTIILQGVIADEDYKKADKLFDELL 316
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ GLVPD++TYNVYINGLCKQ +E G KM+ ME+LG +P+ VTYN ++ + ++ +
Sbjct: 317 LLGLVPDVYTYNVYINGLCKQSDIECGIKMMSCMEKLGSEPNVVTYNILIKALVKAGDMS 376
Query: 50 RAREVFAEMKLKGVN 6
RA+ ++ EM+ GV+
Sbjct: 377 RAKIIWEEMETNGVD 391
>ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g38420, mitochondrial; Flags: Precursor
gi|3395430|gb|AAC28762.1| hypothetical protein
[Arabidopsis thaliana] gi|330254441|gb|AEC09535.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 453
Score = 140 bits (352), Expect = 2e-31
Identities = 61/135 (45%), Positives = 95/135 (70%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ V+ LV+ GRG E + VL +MK + ++P ++CYT+ L+GVI D+ +A+ LFDE+L
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 313
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ GL PD++TYNVYINGLCKQ +E KM+ M +LG +P+ VTYN ++ + ++ +
Sbjct: 314 LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLS 373
Query: 50 RAREVFAEMKLKGVN 6
RA+ ++ EM+ GVN
Sbjct: 374 RAKTLWKEMETNGVN 388
>gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|31376375|gb|AAP49514.1|
At2g38420 [Arabidopsis thaliana]
Length = 444
Score = 140 bits (352), Expect = 2e-31
Identities = 61/135 (45%), Positives = 95/135 (70%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ V+ LV+ GRG E + VL +MK + ++P ++CYT+ L+GVI D+ +A+ LFDE+L
Sbjct: 245 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 304
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ GL PD++TYNVYINGLCKQ +E KM+ M +LG +P+ VTYN ++ + ++ +
Sbjct: 305 LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLS 364
Query: 50 RAREVFAEMKLKGVN 6
RA+ ++ EM+ GVN
Sbjct: 365 RAKTLWKEMETNGVN 379
>ref|XP_002879744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325583|gb|EFH56003.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 444
Score = 139 bits (349), Expect = 5e-31
Identities = 62/135 (45%), Positives = 93/135 (68%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ V+ LV+ GRG E + VL +MK + I P ++CYT+ L GVI D+ +A+ LFDE+L
Sbjct: 245 YTVVMRFLVEGGRGKEVVSVLNQMKCDRIDPDVVCYTIVLLGVIADEDYPKADKLFDELL 304
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ GL PD++TYNVYINGLCKQ +E KM+ M +LG +P+ VTYN ++ ++ +
Sbjct: 305 LLGLDPDVYTYNVYINGLCKQNDIEGAIKMMSSMNKLGSEPNVVTYNIVIKGLVKAGDLS 364
Query: 50 RAREVFAEMKLKGVN 6
RA+ ++ EM++ GVN
Sbjct: 365 RAKTLWKEMEMNGVN 379
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ IN L KQ A+ ++ M G +P+++ Y + ++G+++ GD RA+ L+ E+
Sbjct: 315 YNVYINGLCKQNDIEGAIKMMSSMNKLGSEPNVVTYNIVIKGLVKAGDLSRAKTLWKEME 374
Query: 230 VFGLVPDIHTYNVYING-------LCKQGSVEAGYKM 141
+ G+ + HTY++ I+ +C QG +E + M
Sbjct: 375 MNGVNRNSHTYDIMISAYIEVDEVVCAQGLLEEAFNM 411
>ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Capsella rubella]
gi|482562854|gb|EOA27044.1| hypothetical protein
CARUB_v10023139mg [Capsella rubella]
Length = 470
Score = 135 bits (341), Expect = 4e-30
Identities = 58/135 (42%), Positives = 94/135 (69%)
Frame = -3
Query: 410 YSTVINLLVKQGRGMEALDVLGEMKAEGIKPHIICYTMALRGVIEYGDFRRAEDLFDEIL 231
Y+ V++ LV+ GRG E + VL +MK + I+P I+CYT+ L+GVI ++ +A+ FDE+L
Sbjct: 271 YTVVMSFLVEGGRGKEVVSVLNQMKCDRIEPDIVCYTIVLQGVIADAEYSKADKFFDELL 330
Query: 230 VFGLVPDIHTYNVYINGLCKQGSVEAGYKMICGMEQLGCKPDSVTYNTILDSFCRSREFC 51
+ GL PD++TYNVY+NGLCKQ +E KM+ M +LG +P+ +TYN ++ + + +
Sbjct: 331 LLGLAPDVYTYNVYMNGLCKQNDIEGALKMMSSMNKLGSEPNVITYNILIKALVNAGDLS 390
Query: 50 RAREVFAEMKLKGVN 6
+A+ ++ EM + GVN
Sbjct: 391 QAKTLWEEMGINGVN 405