BLASTX nr result

ID: Rheum21_contig00039947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039947
         (273 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65994.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   8e-10
ref|XP_004309385.1| PREDICTED: uncharacterized protein LOC101293...    57   3e-06

>emb|CCA65994.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 803

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/73 (45%), Positives = 43/73 (58%)
 Frame = +3

Query: 54  GQLLLMKQWYNGFDPQTESISKMDLWIRIPHLLVELYNADAIQTILEDNHFGSLIKLDPF 233
           G LL+++ W   FDP  E I  +DLW+RIP L  EL N D+I  +L  N  G+LIKLD  
Sbjct: 407 GDLLVLQPWKPSFDPYLEEIKWVDLWVRIPRLPTELLNFDSIANLLASNDIGALIKLDQR 466

Query: 234 ASKRKCAKFVRIC 272
           +  R   +F R C
Sbjct: 467 SLLRNKIRFARAC 479


>ref|XP_004309385.1| PREDICTED: uncharacterized protein LOC101293944, partial [Fragaria
           vesca subsp. vesca]
          Length = 328

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/73 (38%), Positives = 44/73 (60%)
 Frame = +3

Query: 54  GQLLLMKQWYNGFDPQTESISKMDLWIRIPHLLVELYNADAIQTILEDNHFGSLIKLDPF 233
           GQ L++++W + F+P+T+ I KM LWIRI  L V+ +   AI+ I      G ++K+DP 
Sbjct: 106 GQTLIVRKWSSDFNPETDVIGKMALWIRICGLPVKFFKPYAIEKI--GKILGDVVKVDPI 163

Query: 234 ASKRKCAKFVRIC 272
              +   KF R+C
Sbjct: 164 TLGQARGKFARVC 176


Top