BLASTX nr result

ID: Rheum21_contig00039863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039863
         (353 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    61   1e-07
ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    61   1e-07
ref|XP_004495144.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    57   2e-06
ref|XP_006349746.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    56   4e-06
ref|XP_004247336.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    56   4e-06
ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...    56   4e-06
ref|XP_006352754.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    56   6e-06
ref|XP_004242349.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    56   6e-06

>ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -1

Query: 245 DIKHGKKRGSYSCGRCGLPKKGHVCNLSA 159
           D+K GKKRGSY+CGRCGLPKKGHVCNL++
Sbjct: 18  DLKRGKKRGSYNCGRCGLPKKGHVCNLNS 46


>ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -1

Query: 245 DIKHGKKRGSYSCGRCGLPKKGHVCNLSA 159
           D+K GKKRGSY+CGRCGLPKKGHVCNL++
Sbjct: 18  DLKRGKKRGSYNCGRCGLPKKGHVCNLNS 46


>ref|XP_004495144.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cicer arietinum]
          Length = 594

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 245 DIKHGKKRGSYSCGRCGLPKKGHVCNL 165
           DIK GKKRGSY+CGRCGLPKKGH CN+
Sbjct: 23  DIKRGKKRGSYNCGRCGLPKKGHNCNV 49


>ref|XP_006349746.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum tuberosum]
          Length = 595

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -1

Query: 239 KHGKKRGSYSCGRCGLPKKGHVCNLSAD 156
           K GKKRGSY+CGRCGLPKKGHVC+L+ +
Sbjct: 19  KRGKKRGSYNCGRCGLPKKGHVCDLTKE 46


>ref|XP_004247336.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum lycopersicum]
          Length = 592

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -1

Query: 239 KHGKKRGSYSCGRCGLPKKGHVCNLSAD 156
           K GKKRGSY+CGRCGLPKKGHVC+L+ +
Sbjct: 19  KRGKKRGSYNCGRCGLPKKGHVCDLTKE 46


>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
           gi|297735494|emb|CBI17934.3| unnamed protein product
           [Vitis vinifera]
          Length = 574

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = -1

Query: 245 DIKHGKKRGSYSCGRCGLPKKGHVCNLS 162
           D K GKKRGSY+CGRCG PKKGH CNLS
Sbjct: 25  DAKRGKKRGSYNCGRCGQPKKGHSCNLS 52


>ref|XP_006352754.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum tuberosum]
          Length = 590

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -1

Query: 239 KHGKKRGSYSCGRCGLPKKGHVCN 168
           K GKKRGSYSCGRCG+PKKGHVCN
Sbjct: 21  KRGKKRGSYSCGRCGVPKKGHVCN 44


>ref|XP_004242349.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum lycopersicum]
          Length = 591

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -1

Query: 239 KHGKKRGSYSCGRCGLPKKGHVCN 168
           K GKKRGSYSCGRCG+PKKGHVCN
Sbjct: 21  KRGKKRGSYSCGRCGVPKKGHVCN 44