BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039854
         (333 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containi...    75   9e-12
emb|CBI26355.3| unnamed protein product [Vitis vinifera]               75   9e-12
ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
gb|EOY05877.1| Tetratricopeptide repeat-like superfamily protein...    72   8e-11
ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_002517025.1| pentatricopeptide repeat-containing protein,...    69   5e-10

>ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 642

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = +2

Query: 164 LQLLNSCQTVIHLKSVHARLLIEGSYASSDLIHNKLIRLYSRFGFVSYAHKVFDGI 331
           L ++++C+T+  LKS+HARLLIE S ASS+ + NKL+RLYSRFG   YAHKVFD I
Sbjct: 6   LHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEI 61


>emb|CBI26355.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = +2

Query: 164 LQLLNSCQTVIHLKSVHARLLIEGSYASSDLIHNKLIRLYSRFGFVSYAHKVFDGI 331
           L ++++C+T+  LKS+HARLLIE S ASS+ + NKL+RLYSRFG   YAHKVFD I
Sbjct: 6   LHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEI 61


>ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Solanum tuberosum]
          Length = 668

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = +2

Query: 170 LLNSCQTVIHLKSVHARLLIEGSYASSDLIHNKLIRLYSRFGFVSYAHKVFDGI 331
           LL +C+T+  LKSVHA LL+ GS ASSDL+ NK+IRLYSRFG  +YA KVFD I
Sbjct: 8   LLQTCKTLHRLKSVHAHLLVCGSIASSDLVLNKIIRLYSRFGATNYARKVFDEI 61


>gb|EOY05877.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|508713981|gb|EOY05878.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 683

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/56 (60%), Positives = 44/56 (78%)
 Frame = +2

Query: 164 LQLLNSCQTVIHLKSVHARLLIEGSYASSDLIHNKLIRLYSRFGFVSYAHKVFDGI 331
           L LL+  Q++  LKS+HARLLI+GS ASSDL+ NK +R Y+RFG + YAHK+FD I
Sbjct: 22  LSLLDRAQSLKPLKSIHARLLIDGSIASSDLVLNKFLRFYARFGSIQYAHKLFDQI 77


>ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Solanum lycopersicum]
          Length = 668

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/55 (63%), Positives = 44/55 (80%)
 Frame = +2

Query: 167 QLLNSCQTVIHLKSVHARLLIEGSYASSDLIHNKLIRLYSRFGFVSYAHKVFDGI 331
           +LL +C+T+  LKSVHA LL+ GS ASSDL+ NK+IRLY+RFG  +YA KVFD I
Sbjct: 7   RLLQTCKTLHSLKSVHAHLLVCGSIASSDLVLNKIIRLYTRFGATNYARKVFDEI 61


>ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543660|gb|EEF45188.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 640

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/53 (62%), Positives = 42/53 (79%)
 Frame = +2

Query: 167 QLLNSCQTVIHLKSVHARLLIEGSYASSDLIHNKLIRLYSRFGFVSYAHKVFD 325
           +LL  C+++  L ++HA LLI GS ASSDL  NKL+RLYS+FG VSYAHK+FD
Sbjct: 8   KLLKQCRSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFD 60