BLASTX nr result
ID: Rheum21_contig00039748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039748
(351 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ... 145 7e-33
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243... 142 6e-32
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 140 2e-31
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 139 4e-31
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255... 137 1e-30
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 136 3e-30
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 136 3e-30
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 136 3e-30
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 135 7e-30
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 134 9e-30
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260... 134 1e-29
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 134 1e-29
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 134 2e-29
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 133 3e-29
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 132 4e-29
gb|EOY25713.1| Uncharacterized protein TCM_027093 [Theobroma cacao] 131 8e-29
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 131 1e-28
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi... 131 1e-28
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 131 1e-28
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 130 1e-28
>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
Length = 492
Score = 145 bits (365), Expect = 7e-33
Identities = 65/115 (56%), Positives = 85/115 (73%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
FWGDC+LTAT+L+NRFPSK+L+ PY++L+GS PDY+ L++FG LC+ STL RDK
Sbjct: 199 FWGDCLLTATYLINRFPSKVLNGKCPYQVLFGSLPDYSHLKSFGSLCFVSTLTRHRDKLM 258
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSSTLFPS 3
P A +FLGYPF +KGYK+LNL ++VSRDV F E +FP+ P S LFP+
Sbjct: 259 PRAIPGVFLGYPFAQKGYKVLNLQTSQVIVSRDVKFFESIFPFSYSLPMSKLFPA 313
>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
lycopersicum]
Length = 957
Score = 142 bits (357), Expect = 6e-32
Identities = 61/115 (53%), Positives = 84/115 (73%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+WG+CVLTAT+++NR P+KLL N SPYEILY +P Y+ L++FGCLC+ + LK +DKFE
Sbjct: 783 YWGECVLTATYIINRLPTKLLQNKSPYEILYLKQPTYSHLKSFGCLCFPTVLKTHKDKFE 842
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSSTLFPS 3
P +F+GYPF KGYK+LNL + +SRDV+FHE +FP+ +P + F S
Sbjct: 843 PRTIPHIFVGYPFNTKGYKVLNLATKKVHISRDVVFHERMFPFVHVPDDDSSFSS 897
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 140 bits (352), Expect = 2e-31
Identities = 61/113 (53%), Positives = 83/113 (73%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
F G+ +LTA HL+NR P+K+LH SPYE+L+GS+P Y++LRTFGCLCYA +DKF
Sbjct: 686 FRGESILTAIHLINRTPTKILHGKSPYEVLFGSRPSYSALRTFGCLCYAHYRARDKDKFS 745
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSSTLF 9
+ +C+F+GYP+GKKG++L +L+ VSRDV+F E VFPY T+ SS F
Sbjct: 746 ERSRRCVFVGYPYGKKGWRLYDLEKNKFFVSRDVVFQETVFPYGTIESSSIPF 798
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 139 bits (350), Expect = 4e-31
Identities = 65/112 (58%), Positives = 81/112 (72%)
Frame = -2
Query: 350 SFWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKF 171
S WGDCVLTA L+NR PS+LL N +PYEIL G+ P Y LRTFGCLCY+ST R KF
Sbjct: 738 SLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKF 797
Query: 170 EPMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSST 15
+P + CLFLGYP G KGYKL++L++ ++ +SR+V FHE VFP P S +
Sbjct: 798 QPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFPLAKNPGSES 849
>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
lycopersicum]
Length = 1125
Score = 137 bits (345), Expect = 1e-30
Identities = 59/115 (51%), Positives = 82/115 (71%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+WG+CVLTA +++NR P+KLL N SPYE LY +P Y+ L++FGCLC+ + LK +DKFE
Sbjct: 790 YWGECVLTAIYIINRLPTKLLQNKSPYETLYLKQPTYSHLKSFGCLCFPTVLKTHKDKFE 849
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSSTLFPS 3
P +F+GYPF KGYK+LNL + +SRDV+FHE +FP+ +P + F S
Sbjct: 850 PRGIPHVFVGYPFNTKGYKVLNLATKKVHISRDVVFHERMFPFVHVPDDDSSFSS 904
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 136 bits (342), Expect = 3e-30
Identities = 62/102 (60%), Positives = 74/102 (72%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+WGDCVLTA L+NR PS LL N SPYE+L G P Y+ LRTFGCLCY ST R KF
Sbjct: 699 YWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTFGCLCYGSTSPKQRHKFM 758
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFP 42
P + C+FLGYP G KGYKLL+L++ I +SR+V FHE +FP
Sbjct: 759 PRSRACVFLGYPSGYKGYKLLDLESNKIYISRNVTFHEDIFP 800
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 136 bits (342), Expect = 3e-30
Identities = 61/103 (59%), Positives = 76/103 (73%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
FWGDCVLTA L+NR P+ +L+N SPYE L P Y SL+TFGCLCY+ST R KFE
Sbjct: 725 FWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFE 784
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPY 39
P A C+FLGYP G KGYKLL+++ ++ +SR VIFHE +FP+
Sbjct: 785 PRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIFHEDIFPF 827
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 136 bits (342), Expect = 3e-30
Identities = 62/111 (55%), Positives = 81/111 (72%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+WGDCVLTA L+NR PS LL N +P+E+L G PDY+ L+TFGCLCY+ST R KF
Sbjct: 750 YWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFL 809
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSST 15
P + C+FLGYPFG KGYKLL+L++ + +SR+V FHE +FP + S+T
Sbjct: 810 PRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHEELFPLASSQQSAT 860
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 135 bits (339), Expect = 7e-30
Identities = 57/103 (55%), Positives = 77/103 (74%)
Frame = -2
Query: 350 SFWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKF 171
S+W DCVLT THL+NR PS +L+N +PY++L+ P+YN + FGCLC+AST+ + R KF
Sbjct: 687 SYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKF 746
Query: 170 EPMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFP 42
+P A+KC+FLGYP KGYK+L+L VSR+V+FHE FP
Sbjct: 747 QPRATKCIFLGYPPNIKGYKVLDLTTXKXFVSRNVJFHESTFP 789
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 134 bits (338), Expect = 9e-30
Identities = 61/111 (54%), Positives = 79/111 (71%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+WG+ VLTAT+L+NR P+KLL SPYE+LY KP Y+ L+ FGCLC+ +TLK +DKFE
Sbjct: 441 YWGEYVLTATYLINRLPTKLLPGKSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHKDKFE 500
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSST 15
P +F+GYPF KGYK+LNL I VSRDV F+E + P+ PP S+
Sbjct: 501 PRTVPHIFIGYPFNTKGYKVLNLATKRIHVSRDVSFYETILPFVIAPPGSS 551
>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
lycopersicum]
Length = 924
Score = 134 bits (337), Expect = 1e-29
Identities = 60/103 (58%), Positives = 76/103 (73%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+W +CVLTAT+L+NR P+KLL SPYE+LY KP Y+ LR FGCLC+ +TLK +DKFE
Sbjct: 619 YWVECVLTATYLINRLPTKLLQGKSPYELLYQKKPFYSHLRNFGCLCFPTTLKTHKDKFE 678
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPY 39
P +F+GYPF KGYK+LN D I VSRDV+F+E V P+
Sbjct: 679 PRTMPHIFIGYPFNTKGYKVLNWDTKRIHVSRDVLFYETVLPF 721
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 134 bits (337), Expect = 1e-29
Identities = 59/105 (56%), Positives = 77/105 (73%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+W DCV TA L+NR PS LL+N SPYE++ +PDY+ L+ FGCLC+ ST H R KF
Sbjct: 758 YWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKFT 817
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYT 33
P A C+FLGYP G KGYK+L+L++ S+ VSR+V+F E VFP+ T
Sbjct: 818 PRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVFKEHVFPFKT 862
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 134 bits (336), Expect = 2e-29
Identities = 58/103 (56%), Positives = 76/103 (73%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+WGDCVLTA L+NR S +++N +PYE L KPDY+SL+ FGCLCY ST R KF+
Sbjct: 740 YWGDCVLTAVFLINRLLSPVINNETPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFD 799
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPY 39
P A C+FLGYP G KGYKLL+++ S+ +SR VIF+E +FP+
Sbjct: 800 PRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDIFPF 842
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 133 bits (334), Expect = 3e-29
Identities = 59/110 (53%), Positives = 77/110 (70%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
+WG+CVLTAT+L+NR P+KLL SPYE+LY KP Y+ L+ FGCLC+ +TLK ++KFE
Sbjct: 784 YWGECVLTATYLINRLPTKLLQGKSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHKEKFE 843
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSS 18
P +F+GYPF KGYK+LNL I V RDV F+E + P+ P S
Sbjct: 844 PRTVPHIFIGYPFNTKGYKVLNLATKRIHVFRDVFFYETILPFVIAPAGS 893
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 132 bits (333), Expect = 4e-29
Identities = 59/103 (57%), Positives = 75/103 (72%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
FWGDC+L+A L+NR P+ LL N SP+E+L+ PDY SL+ FGCLCY ST R KF
Sbjct: 767 FWGDCILSAVFLINRLPTPLLSNKSPFELLHLKVPDYTSLKVFGCLCYESTSPQQRHKFA 826
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPY 39
P A C+FLGYP G KGYKLL+L+ +I +SR V+F+E VFP+
Sbjct: 827 PRARACVFLGYPSGYKGYKLLDLETNTIHISRHVVFYETVFPF 869
>gb|EOY25713.1| Uncharacterized protein TCM_027093 [Theobroma cacao]
Length = 994
Score = 131 bits (330), Expect = 8e-29
Identities = 57/103 (55%), Positives = 74/103 (71%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
FWGD VLTA H++NR PSK+LHN +PYE+L+ P Y+ LR FGCLC+ TL R K +
Sbjct: 500 FWGDAVLTAVHIINRLPSKVLHNKTPYELLHHKLPSYDHLRVFGCLCFMFTLTQNRKKLD 559
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPY 39
A+KC+FLGYP KGYK+ +L ++L SR+VIFHE FP+
Sbjct: 560 KRATKCIFLGYPNNMKGYKVYDLSANNVLKSRNVIFHEQTFPF 602
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 131 bits (329), Expect = 1e-28
Identities = 56/104 (53%), Positives = 76/104 (73%)
Frame = -2
Query: 350 SFWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKF 171
S+WGDC+LTA +L+NR P+ +L + P+E+L + P Y+ ++ FGCLCYAST R KF
Sbjct: 587 SYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKF 646
Query: 170 EPMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPY 39
P A C F+GYP G KGYKLL+L+ SI+VSR V+FHE +FP+
Sbjct: 647 SPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPF 690
>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 131 bits (329), Expect = 1e-28
Identities = 59/101 (58%), Positives = 76/101 (75%)
Frame = -2
Query: 344 WGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFEP 165
WG+CVLTA L+NR PS+LL N +PYEIL G+ P Y LRTFGCLCY+ST R KF+P
Sbjct: 599 WGECVLTAVFLINRTPSQLLSNKTPYEILSGTAPQYGQLRTFGCLCYSSTSPKQRHKFQP 658
Query: 164 MASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFP 42
+ C+FLGY G KGYKL++L++ +I +SR+V+F E VFP
Sbjct: 659 RSKACIFLGYSSGYKGYKLMDLESNAIFISRNVVFLEEVFP 699
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 131 bits (329), Expect = 1e-28
Identities = 56/114 (49%), Positives = 78/114 (68%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
FWG+ +LTATHL+NR PS +L +PYE+L+G +P Y+ LR+FGCLCYA +DKF
Sbjct: 683 FWGESILTATHLINRTPSAVLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFT 742
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSSTLFP 6
+ KC+F+GYP GKK +++ +L+ I SRDV FHE ++PY T S+ P
Sbjct: 743 SRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYPYATATQSNVPLP 796
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 130 bits (328), Expect = 1e-28
Identities = 59/110 (53%), Positives = 76/110 (69%)
Frame = -2
Query: 347 FWGDCVLTATHLVNRFPSKLLHNSSPYEILYGSKPDYNSLRTFGCLCYASTLKHGRDKFE 168
FWG+CVLTA +L+NR P+ LL N SP+E+LY P LR FGC CY + + H + KF+
Sbjct: 950 FWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTNV-HPKQKFD 1008
Query: 167 PMASKCLFLGYPFGKKGYKLLNLDNISILVSRDVIFHELVFPYYTMPPSS 18
P AS C+FLGYP GKKGYK+L+L I VSRDV F E +FP+++ S
Sbjct: 1009 PRASICVFLGYPHGKKGYKVLDLQTQKISVSRDVFFRENIFPFHSSSSQS 1058