BLASTX nr result
ID: Rheum21_contig00039745
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039745
(321 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230341.1| PREDICTED: polygalacturonase At1g48100-like ... 86 4e-15
ref|XP_006344808.1| PREDICTED: polygalacturonase At1g48100-like ... 86 7e-15
ref|XP_006344807.1| PREDICTED: polygalacturonase At1g48100-like ... 86 7e-15
ref|XP_003591344.1| Polygalacturonase [Medicago truncatula] gi|3... 82 9e-14
ref|XP_004495880.1| PREDICTED: polygalacturonase At1g48100-like ... 78 1e-12
ref|XP_003536857.1| PREDICTED: polygalacturonase At1g48100-like ... 78 1e-12
ref|XP_003518665.1| PREDICTED: polygalacturonase At1g48100-like ... 78 1e-12
ref|XP_002307031.2| hypothetical protein POPTR_0005s00720g [Popu... 77 2e-12
gb|ESW35210.1| hypothetical protein PHAVU_001G215900g [Phaseolus... 77 3e-12
ref|XP_006604753.1| PREDICTED: polygalacturonase At1g48100-like ... 76 5e-12
ref|XP_003553676.1| PREDICTED: polygalacturonase At1g48100-like ... 76 5e-12
ref|XP_002455574.1| hypothetical protein SORBIDRAFT_03g013330 [S... 75 7e-12
ref|XP_004967589.1| PREDICTED: polygalacturonase At1g48100-like ... 75 9e-12
gb|EMJ22769.1| hypothetical protein PRUPE_ppa024649mg, partial [... 75 9e-12
ref|XP_003567574.1| PREDICTED: polygalacturonase At1g48100-like ... 75 9e-12
ref|XP_004304915.1| PREDICTED: polygalacturonase At1g48100-like ... 75 1e-11
ref|XP_002455500.1| hypothetical protein SORBIDRAFT_03g012280 [S... 75 1e-11
tpg|DAA54467.1| TPA: hypothetical protein ZEAMMB73_770856 [Zea m... 74 2e-11
tpg|DAA54465.1| TPA: polygalacturonase [Zea mays] 74 2e-11
gb|ACN29256.1| unknown [Zea mays] 74 2e-11
>ref|XP_004230341.1| PREDICTED: polygalacturonase At1g48100-like [Solanum lycopersicum]
Length = 476
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ L+CS+SVPCTNLT DVEL PA G K ++PFCWNAYG L + +PPV
Sbjct: 408 PMHLACSNSVPCTNLTFLDVELYPAQG---------QKILEPFCWNAYGAL-ITLTIPPV 457
Query: 182 YCLLDGVPFSVPFTDPPQC 238
+CLL+G P S+P D QC
Sbjct: 458 FCLLEGTPQSLPSNDLDQC 476
>ref|XP_006344808.1| PREDICTED: polygalacturonase At1g48100-like isoform X2 [Solanum
tuberosum]
Length = 476
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ L+CS+SVPCTNLT DVEL PA G K ++PFCWNAYG L + +PPV
Sbjct: 408 PMHLACSNSVPCTNLTFLDVELYPAQG---------QKILEPFCWNAYGAL-MTLTIPPV 457
Query: 182 YCLLDGVPFSVPFTDPPQC 238
+CLL+G P S+P D QC
Sbjct: 458 FCLLEGTPQSLPSNDLDQC 476
>ref|XP_006344807.1| PREDICTED: polygalacturonase At1g48100-like isoform X1 [Solanum
tuberosum]
Length = 477
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ L+CS+SVPCTNLT DVEL PA G K ++PFCWNAYG L + +PPV
Sbjct: 409 PMHLACSNSVPCTNLTFLDVELYPAQG---------QKILEPFCWNAYGAL-MTLTIPPV 458
Query: 182 YCLLDGVPFSVPFTDPPQC 238
+CLL+G P S+P D QC
Sbjct: 459 FCLLEGTPQSLPSNDLDQC 477
>ref|XP_003591344.1| Polygalacturonase [Medicago truncatula] gi|355480392|gb|AES61595.1|
Polygalacturonase [Medicago truncatula]
Length = 478
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/79 (48%), Positives = 48/79 (60%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ +CSDS+PCTNLT+SD+EL P+ G PFCWNAYG +PPV
Sbjct: 410 PMHFACSDSIPCTNLTLSDIELLPSQG---------DMLNDPFCWNAYGN-SETLTIPPV 459
Query: 182 YCLLDGVPFSVPFTDPPQC 238
+CLLDG+P S+P D C
Sbjct: 460 FCLLDGIPQSIPANDIDHC 478
>ref|XP_004495880.1| PREDICTED: polygalacturonase At1g48100-like [Cicer arietinum]
Length = 479
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ +CSDSVPCTNLT+SD+EL P+ G PFCWNAYG +PPV
Sbjct: 411 PMHFACSDSVPCTNLTLSDIELLPSQGDIVN---------DPFCWNAYGN-SEALTIPPV 460
Query: 182 YCLLDGVPFSVPFTDPPQC 238
+CLLDG+P S+ D C
Sbjct: 461 FCLLDGIPQSISDNDIDHC 479
>ref|XP_003536857.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 475
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+R +CSDSVPCTNLT+SD+EL PD+G + + PFCW+AYG +PPV
Sbjct: 407 PMRFACSDSVPCTNLTLSDIELL----PDQGDIV-----LDPFCWSAYGN-SETLTIPPV 456
Query: 182 YCLLDGVPFSVPFTDPPQC 238
+CLL+G+P S+ D C
Sbjct: 457 FCLLEGLPQSISGNDIDHC 475
>ref|XP_003518665.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 473
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+R +CSDSVPCTNLT+SD+EL PA G + + PFCW+AYG +PPV
Sbjct: 405 PMRFACSDSVPCTNLTLSDIELLPAQG---------NIVLDPFCWSAYGN-SETLTIPPV 454
Query: 182 YCLLDGVPFSVPFTDPPQC 238
+C+L+G+P S+ D C
Sbjct: 455 FCMLEGLPQSISGNDIDHC 473
>ref|XP_002307031.2| hypothetical protein POPTR_0005s00720g [Populus trichocarpa]
gi|550337647|gb|EEE94027.2| hypothetical protein
POPTR_0005s00720g [Populus trichocarpa]
Length = 482
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/79 (48%), Positives = 49/79 (62%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ L+CSDSVPCTNL +S++EL PA G PFCWNAYG + + +PPV
Sbjct: 405 PLHLACSDSVPCTNLRLSEIELLPAQG---------QFMANPFCWNAYGPM-QNLTIPPV 454
Query: 182 YCLLDGVPFSVPFTDPPQC 238
CLLDG+P +P + QC
Sbjct: 455 SCLLDGIPQFLPQNNIDQC 473
>gb|ESW35210.1| hypothetical protein PHAVU_001G215900g [Phaseolus vulgaris]
Length = 460
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/79 (51%), Positives = 48/79 (60%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+R SCSDSVPCTNLT+S++EL PA G PFCWNAYG L +PPV
Sbjct: 392 PMRFSCSDSVPCTNLTLSEIELLPAQGDIV---------HDPFCWNAYGDLET-LTIPPV 441
Query: 182 YCLLDGVPFSVPFTDPPQC 238
CLL+G P SV D +C
Sbjct: 442 SCLLEGTPQSVLDFDITRC 460
>ref|XP_006604753.1| PREDICTED: polygalacturonase At1g48100-like isoform X2 [Glycine
max]
Length = 447
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/79 (50%), Positives = 48/79 (60%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+R +CSDSVPCTNLT+SD+EL P+ G PFCWNAYG L +PPV
Sbjct: 379 PMRFACSDSVPCTNLTLSDIELLPSQGDIV---------HDPFCWNAYGDLET-LTIPPV 428
Query: 182 YCLLDGVPFSVPFTDPPQC 238
CLL+G P SV D +C
Sbjct: 429 SCLLEGTPQSVLDYDITRC 447
>ref|XP_003553676.1| PREDICTED: polygalacturonase At1g48100-like isoform X1 [Glycine
max]
Length = 462
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/79 (50%), Positives = 48/79 (60%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+R +CSDSVPCTNLT+SD+EL P+ G PFCWNAYG L +PPV
Sbjct: 394 PMRFACSDSVPCTNLTLSDIELLPSQGDIV---------HDPFCWNAYGDLET-LTIPPV 443
Query: 182 YCLLDGVPFSVPFTDPPQC 238
CLL+G P SV D +C
Sbjct: 444 SCLLEGTPQSVLDYDITRC 462
>ref|XP_002455574.1| hypothetical protein SORBIDRAFT_03g013330 [Sorghum bicolor]
gi|241927549|gb|EES00694.1| hypothetical protein
SORBIDRAFT_03g013330 [Sorghum bicolor]
Length = 548
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/71 (54%), Positives = 49/71 (69%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+RL+CSD+V CT++T+S VEL PA G DEG L P+CWNAYG + LPPV
Sbjct: 478 PIRLACSDAVACTDITMSGVELLPA-GGDEGAL-----LADPYCWNAYGVMET-LTLPPV 530
Query: 182 YCLLDGVPFSV 214
YCLL+G P S+
Sbjct: 531 YCLLEGSPESL 541
>ref|XP_004967589.1| PREDICTED: polygalacturonase At1g48100-like [Setaria italica]
Length = 486
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/68 (51%), Positives = 41/68 (60%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ CSD+VPCTN+T+SDVEL PA G PFCWN YG P +PPV
Sbjct: 417 PIHFGCSDAVPCTNITLSDVELLPASGQTVD---------DPFCWNVYGN-ATTPTVPPV 466
Query: 182 YCLLDGVP 205
CL+DGVP
Sbjct: 467 ACLMDGVP 474
>gb|EMJ22769.1| hypothetical protein PRUPE_ppa024649mg, partial [Prunus persica]
Length = 437
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/79 (48%), Positives = 49/79 (62%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ +CSD++PCTNLT+S+VEL PAVG + P+CWNAYG L +PPV
Sbjct: 369 PMHFACSDALPCTNLTLSEVELLPAVGDIV---------LDPYCWNAYGELQT-LTIPPV 418
Query: 182 YCLLDGVPFSVPFTDPPQC 238
CLL+GVP S+ D C
Sbjct: 419 SCLLEGVPRSLLDNDIEHC 437
>ref|XP_003567574.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 499
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/79 (45%), Positives = 45/79 (56%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ CSD+VPCTN+T+S VEL PA G PFCWN YG P +PPV
Sbjct: 430 PIHFGCSDAVPCTNITLSGVELLPATGDTVD---------SPFCWNVYGN-ATTPTVPPV 479
Query: 182 YCLLDGVPFSVPFTDPPQC 238
CL+DGVP +V + +C
Sbjct: 480 ACLMDGVPRNVDDSSSLKC 498
>ref|XP_004304915.1| PREDICTED: polygalacturonase At1g48100-like [Fragaria vesca subsp.
vesca]
Length = 459
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ +CSDS+PCTNLT+S+VEL PA + H P CW+AYGT+ V PPV
Sbjct: 390 PMHFACSDSMPCTNLTLSEVELLPAT--------KGHLVPIPLCWSAYGTMQTITV-PPV 440
Query: 182 YCLLDGVPFSVPFTDPPQC 238
CLL+G+P +P D +C
Sbjct: 441 LCLLEGIPELMPQNDSDRC 459
>ref|XP_002455500.1| hypothetical protein SORBIDRAFT_03g012280 [Sorghum bicolor]
gi|241927475|gb|EES00620.1| hypothetical protein
SORBIDRAFT_03g012280 [Sorghum bicolor]
Length = 506
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/79 (45%), Positives = 46/79 (58%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+ CSD+VPCTN+T+SDVEL PA G PFCWN YG+ P +PPV
Sbjct: 437 PIHFGCSDAVPCTNITLSDVELLPASGETID---------DPFCWNVYGS-AATPTVPPV 486
Query: 182 YCLLDGVPFSVPFTDPPQC 238
CL++GVP +V +C
Sbjct: 487 PCLMEGVPRNVEDNSSLKC 505
>tpg|DAA54467.1| TPA: hypothetical protein ZEAMMB73_770856 [Zea mays]
Length = 367
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+RL+CSD+V CT++T+S VEL PA G D+G L P+CWNAYG + LPPV
Sbjct: 297 PIRLACSDAVACTDITMSGVELLPA-GGDDGAL-----LADPYCWNAYGVMET-LTLPPV 349
Query: 182 YCLLDGVPFSV 214
YCLL+G P S+
Sbjct: 350 YCLLEGSPESL 360
>tpg|DAA54465.1| TPA: polygalacturonase [Zea mays]
Length = 502
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+RL+CSD+V CT++T+S VEL PA G D+G L P+CWNAYG + LPPV
Sbjct: 432 PIRLACSDAVACTDITMSGVELLPA-GGDDGAL-----LADPYCWNAYGVMET-LTLPPV 484
Query: 182 YCLLDGVPFSV 214
YCLL+G P S+
Sbjct: 485 YCLLEGSPESL 495
>gb|ACN29256.1| unknown [Zea mays]
Length = 332
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +2
Query: 2 PVRLSCSDSVPCTNLTISDVELAPAVGPDEGKLQQQHKWMQPFCWNAYGTLGVDPVLPPV 181
P+RL+CSD+V CT++T+S VEL PA G D+G L P+CWNAYG + LPPV
Sbjct: 262 PIRLACSDAVACTDITMSGVELLPA-GGDDGAL-----LADPYCWNAYGVMET-LTLPPV 314
Query: 182 YCLLDGVPFSV 214
YCLL+G P S+
Sbjct: 315 YCLLEGSPESL 325