BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039650
         (520 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB87349.1| Serine/threonine-protein phosphatase PP2A-4 catal...   186   4e-45
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_006481967.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   173   2e-41
gb|EMJ22674.1| hypothetical protein PRUPE_ppa004164mg [Prunus pe...   172   3e-41
ref|XP_006430418.1| hypothetical protein CICLE_v10011492mg [Citr...   165   7e-39
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   162   4e-38
ref|XP_004295922.1| PREDICTED: pentatricopeptide repeat-containi...   162   6e-38
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              160   2e-37
gb|EOY32165.1| Pentatricopeptide repeat protein isoform 1 [Theob...   157   1e-36
ref|XP_002327460.1| predicted protein [Populus trichocarpa]           156   2e-36
gb|EOY32166.1| Pentatricopeptide repeat protein isoform 2 [Theob...   142   4e-32
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
emb|CBI30729.3| unnamed protein product [Vitis vinifera]              103   3e-20
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   101   9e-20
ref|XP_006372460.1| hypothetical protein POPTR_0017s01850g [Popu...    98   1e-18
gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily p...    97   2e-18
emb|CBI39619.3| unnamed protein product [Vitis vinifera]               97   3e-18
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18

>gb|EXB87349.1| Serine/threonine-protein phosphatase PP2A-4 catalytic subunit
           [Morus notabilis]
          Length = 783

 Score =  186 bits (471), Expect = 4e-45
 Identities = 95/163 (58%), Positives = 125/163 (76%)
 Frame = -1

Query: 490 LKSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISD 311
           +KSS+R+LSLL    CLT + + QIQSHL V+GT+ DP+AA K++A F +TSD AS +  
Sbjct: 1   MKSSRRVLSLLDQ--CLTFTQIKQIQSHLAVSGTLFDPYAAAKIIA-FCSTSD-ASYVCH 56

Query: 310 AYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVD 131
           AY+LF  +P+RT Y WN+MI+ FAE N+  +ALS+Y+ M+ NGF+PNNYTFSF++RA  +
Sbjct: 57  AYRLFHCMPYRTTYIWNTMIRAFAEGNEAIRALSLYKNMLENGFLPNNYTFSFLLRACTE 116

Query: 130 LSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
           LS LS+G+TIH Q I+LGWESYDFVQNGL HLYA    +  AR
Sbjct: 117 LSDLSLGFTIHGQTIRLGWESYDFVQNGLIHLYATCFCMDPAR 159


>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  181 bits (460), Expect = 7e-44
 Identities = 91/166 (54%), Positives = 122/166 (73%)
 Frame = -1

Query: 499 TKYLKSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASG 320
           +KYLKSS+R+LSLL    C+T +H+ QIQSHL V+GT+ DPFAAG++++ F A S +   
Sbjct: 7   SKYLKSSRRVLSLLDQ--CVTMAHIKQIQSHLTVSGTLFDPFAAGRIIS-FCAVSAQGD- 62

Query: 319 ISDAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRA 140
           IS AY LFL LP RT + WN+M++ F +  +P   LS+Y+ M+  GF+PNNYTFSF+++A
Sbjct: 63  ISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQA 122

Query: 139 AVDLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
              LS LS G  +HAQA++LGWE+YDFVQNGL HLYA  N +  AR
Sbjct: 123 CAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSAR 168


>ref|XP_006481967.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
          Length = 546

 Score =  179 bits (455), Expect = 3e-43
 Identities = 91/166 (54%), Positives = 119/166 (71%)
 Frame = -1

Query: 499 TKYLKSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASG 320
           +K LK+S+R +SLL    CL    + QIQSHL V+GT+ DPFA GK++  F + SD    
Sbjct: 6   SKILKASKRSVSLLDQ--CLNMKQIKQIQSHLTVSGTLWDPFAVGKIIG-FCSASD-IGD 61

Query: 319 ISDAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRA 140
           +S  Y+LF+ L +RT + WN+MI+GFAE N+P KA ++Y+QM+R+ F+PNNYTFSF++RA
Sbjct: 62  LSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRA 121

Query: 139 AVDLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
             D SCL VG   HAQ I+LGWESYDFV NGL HLYA  N +  AR
Sbjct: 122 CADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPAR 167


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  173 bits (439), Expect = 2e-41
 Identities = 93/168 (55%), Positives = 120/168 (71%)
 Frame = -1

Query: 505 SPTKYLKSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRA 326
           S +KY+K+SQR LSLL+   C T S + Q+ SHLIV+ +  DPFAAGK+++ F  +S+  
Sbjct: 2   SASKYVKASQRCLSLLEQ--CRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSN-- 57

Query: 325 SGISDAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVI 146
           + IS AY+LFL LPHRT + WN++I+ F E N+   ALS+Y+ M++ GF+PNNYTFSFV+
Sbjct: 58  ADISHAYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVL 117

Query: 145 RAAVDLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
           RA  D S   VG   HAQ IKLGWESYDFV NGL HLYA  + V  AR
Sbjct: 118 RACTDNS--PVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAAR 163


>gb|EMJ22674.1| hypothetical protein PRUPE_ppa004164mg [Prunus persica]
          Length = 526

 Score =  172 bits (437), Expect = 3e-41
 Identities = 82/163 (50%), Positives = 116/163 (71%)
 Frame = -1

Query: 490 LKSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISD 311
           +KSS+R LS+L    CLT +H+ QIQSHL V+GT+ DP+AA K++   T ++  +  +  
Sbjct: 1   MKSSKRALSILDQ--CLTMAHIKQIQSHLTVSGTLFDPYAAAKIITFCTVSN--SGDLRH 56

Query: 310 AYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVD 131
           A+QLF  +P+RT Y WN +I+  AE N+  +A+S+Y  M+++G +PNNYTFSF++RA  D
Sbjct: 57  AFQLFRHMPYRTTYIWNVVIRALAENNESMRAVSLYSDMIQSGLLPNNYTFSFLLRACAD 116

Query: 130 LSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
           LS LS G  +H  AI+LGWES+DFVQNGL HLY   +F+  AR
Sbjct: 117 LSYLSFGLVLHCHAIRLGWESHDFVQNGLIHLYVTCDFINPAR 159


>ref|XP_006430418.1| hypothetical protein CICLE_v10011492mg [Citrus clementina]
           gi|557532475|gb|ESR43658.1| hypothetical protein
           CICLE_v10011492mg [Citrus clementina]
          Length = 519

 Score =  165 bits (417), Expect = 7e-39
 Identities = 80/142 (56%), Positives = 105/142 (73%)
 Frame = -1

Query: 427 LHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAYQLFLRLPHRTPYTWNSMIK 248
           + QIQSHL V+GT+ DPFA GK++  F + SD    +S  Y+LF+ L +RT + WN+MI+
Sbjct: 4   IKQIQSHLTVSGTLWDPFAVGKIIG-FCSASD-IGDLSHGYRLFVCLQYRTTFIWNTMIR 61

Query: 247 GFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLSCLSVGWTIHAQAIKLGWES 68
           GFAE N+P KA ++Y+QM+R+ F+PNNYTFSF++RA  D SCL +G   HAQ I+LGWES
Sbjct: 62  GFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFLGLICHAQVIRLGWES 121

Query: 67  YDFVQNGLGHLYAVSNFVADAR 2
           YDFV NGL HLYA  N +  AR
Sbjct: 122 YDFVLNGLLHLYATCNCMDPAR 143


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  162 bits (410), Expect = 4e-38
 Identities = 78/164 (47%), Positives = 115/164 (70%)
 Frame = -1

Query: 493 YLKSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGIS 314
           Y+K+S++ L LL    C T S + QIQ+HL V+GT+ DP+AA K+++ F A S     +S
Sbjct: 6   YVKASKKTLFLLDK--CRTISQIKQIQTHLTVSGTLKDPYAAAKIIS-FCALSSNQFSLS 62

Query: 313 DAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAV 134
            AY+LFL L HR+ + WN++I+ FAE N+P KA+ +++ M+ + F+PNNYT+SF+ +A  
Sbjct: 63  HAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACT 122

Query: 133 DLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
           DL+ L +G   H Q+IKLGWE YDFVQNGL H++A+   +  AR
Sbjct: 123 DLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSAR 166


>ref|XP_004295922.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Fragaria vesca subsp. vesca]
          Length = 524

 Score =  162 bits (409), Expect = 6e-38
 Identities = 83/162 (51%), Positives = 108/162 (66%)
 Frame = -1

Query: 487 KSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDA 308
           ++S+R LSLL    CLT +H+ Q+QSHL V+GT+ DP+AA K+++ F A S     +  A
Sbjct: 3   RASKRALSLLDQ--CLTMAHIKQVQSHLAVSGTLFDPYAAAKVIS-FCALSHNPHHLRHA 59

Query: 307 YQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDL 128
           Y LF  +P RT Y WN MI+ F ++N P +ALS+Y  M+R G  P+NYTFSF +RA+  L
Sbjct: 60  YHLFRFMPTRTTYIWNLMIRTFTDSNDPTQALSLYTNMLRTGSSPDNYTFSFALRASAAL 119

Query: 127 SCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
           S L  G  IH  AI+LGWESYDFVQNGL HLY     +  AR
Sbjct: 120 SSLYFGVMIHTHAIRLGWESYDFVQNGLVHLYVTCESMDSAR 161


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  160 bits (404), Expect = 2e-37
 Identities = 78/144 (54%), Positives = 105/144 (72%)
 Frame = -1

Query: 433 SHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAYQLFLRLPHRTPYTWNSM 254
           +H+ QIQSHL V+GT+ DPFAAG++++ F A S +   IS AY LFL LP RT + WN+M
Sbjct: 2   AHIKQIQSHLTVSGTLFDPFAAGRIIS-FCAVSAQGD-ISHAYLLFLSLPRRTSFIWNTM 59

Query: 253 IKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLSCLSVGWTIHAQAIKLGW 74
           ++ F +  +P   LS+Y+ M+  GF+PNNYTFSF+++A   LS LS G  +HAQA++LGW
Sbjct: 60  LRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGW 119

Query: 73  ESYDFVQNGLGHLYAVSNFVADAR 2
           E+YDFVQNGL HLYA  N +  AR
Sbjct: 120 EAYDFVQNGLLHLYASCNCMDSAR 143


>gb|EOY32165.1| Pentatricopeptide repeat protein isoform 1 [Theobroma cacao]
          Length = 537

 Score =  157 bits (397), Expect = 1e-36
 Identities = 81/166 (48%), Positives = 116/166 (69%)
 Frame = -1

Query: 499 TKYLKSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASG 320
           ++++K+S+R L+LL    CLT S + Q+QSHLIV+ T+ DP+AAG++++    ++D  + 
Sbjct: 8   SRFVKASRRSLALLDR--CLTMSQIKQMQSHLIVSATLLDPYAAGRIISFCAVSAD--AD 63

Query: 319 ISDAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRA 140
           +S AY+LFL L HRT + WN++I+ F E N    A+S+Y+ M+++GF+PNNYTFSFV+RA
Sbjct: 64  LSHAYKLFLSLQHRTTFIWNTIIRAFVERNANATAISLYKNMLQSGFLPNNYTFSFVLRA 123

Query: 139 AVDLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
               S  S     HA  IKLGWESYDFV NGL HLYA  + +  AR
Sbjct: 124 CTTYS--STALASHALVIKLGWESYDFVLNGLIHLYANLSLMDAAR 167


>ref|XP_002327460.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  156 bits (395), Expect = 2e-36
 Identities = 80/168 (47%), Positives = 115/168 (68%)
 Frame = -1

Query: 505 SPTKYLKSSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRA 326
           S ++YLK+S++ +SLL     LT S L QIQSHL VT T+ DP+AA K+++   A S+  
Sbjct: 2   SASRYLKASKKTISLLDQKG-LTISQLKQIQSHLTVTATLKDPYAAAKIISLH-AHSNAR 59

Query: 325 SGISDAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVI 146
           S +  A +LFL L +++ + WN+M++ F E N+  +A S+Y+ M+ + ++PNN+TFSFVI
Sbjct: 60  SSLFYAERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVI 119

Query: 145 RAAVDLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
           RA +D+  L +G   H Q +K GWESYDFVQNGL HLYA   F+  AR
Sbjct: 120 RACIDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLAR 167


>gb|EOY32166.1| Pentatricopeptide repeat protein isoform 2 [Theobroma cacao]
          Length = 511

 Score =  142 bits (359), Expect = 4e-32
 Identities = 72/144 (50%), Positives = 100/144 (69%)
 Frame = -1

Query: 433 SHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAYQLFLRLPHRTPYTWNSM 254
           S + Q+QSHLIV+ T+ DP+AAG++++    ++D  + +S AY+LFL L HRT + WN++
Sbjct: 2   SQIKQMQSHLIVSATLLDPYAAGRIISFCAVSAD--ADLSHAYKLFLSLQHRTTFIWNTI 59

Query: 253 IKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLSCLSVGWTIHAQAIKLGW 74
           I+ F E N    A+S+Y+ M+++GF+PNNYTFSFV+RA    S  S     HA  IKLGW
Sbjct: 60  IRAFVERNANATAISLYKNMLQSGFLPNNYTFSFVLRACTTYS--STALASHALVIKLGW 117

Query: 73  ESYDFVQNGLGHLYAVSNFVADAR 2
           ESYDFV NGL HLYA  + +  AR
Sbjct: 118 ESYDFVLNGLIHLYANLSLMDAAR 141


>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cicer arietinum]
          Length = 536

 Score =  104 bits (259), Expect = 1e-20
 Identities = 53/161 (32%), Positives = 92/161 (57%)
 Frame = -1

Query: 484 SSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAY 305
           S Q  L++LQNH C T  H H I  H+I TG   +P A+ ++L   T  +  +  I+ AY
Sbjct: 23  SDQPCLTMLQNH-CTTLKHFHMIYPHIIKTGLTHNPIASTRVL---TFCASPSGNINYAY 78

Query: 304 QLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLS 125
           +LF R+P+   Y+WN++I+ F+ ++ P  A+S++  M+ +   P + T+  V +A   LS
Sbjct: 79  KLFARMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQHLTYPSVFKAYAQLS 138

Query: 124 CLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
               G  +H   +KLG +   F+ N + ++YA S  +++A+
Sbjct: 139 AGDYGSQLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAK 179


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/144 (35%), Positives = 83/144 (57%)
 Frame = -1

Query: 433 SHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAYQLFLRLPHRTPYTWNSM 254
           S LHQ  +H++ +G +   FAA +L+A+  +T+  A  I  A+ +F R+P+   Y WN++
Sbjct: 21  SELHQAHAHILKSGLIHSTFAASRLIAS-VSTNSHAQAIPYAHSIFSRIPNPNSYMWNTI 79

Query: 253 IKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLSCLSVGWTIHAQAIKLGW 74
           I+ +A +  P  AL+I+ QM+    +P+ YTF+F +++    S +  G  IH   +K G 
Sbjct: 80  IRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGL 139

Query: 73  ESYDFVQNGLGHLYAVSNFVADAR 2
               F+QN L HLYA    + DAR
Sbjct: 140 GDDLFIQNTLIHLYASCGCIEDAR 163


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/144 (35%), Positives = 83/144 (57%)
 Frame = -1

Query: 433 SHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAYQLFLRLPHRTPYTWNSM 254
           S LHQ  +H++ +G +   FAA +L+A+  +T+  A  I  A+ +F R+P+   Y WN++
Sbjct: 21  SELHQAHAHILKSGLIHSTFAASRLIAS-VSTNSHAQAIPYAHSIFSRIPNPNSYMWNTI 79

Query: 253 IKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLSCLSVGWTIHAQAIKLGW 74
           I+ +A +  P  AL+I+ QM+    +P+ YTF+F +++    S +  G  IH   +K G 
Sbjct: 80  IRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGL 139

Query: 73  ESYDFVQNGLGHLYAVSNFVADAR 2
               F+QN L HLYA    + DAR
Sbjct: 140 GDDLFIQNTLIHLYASCGCIEDAR 163


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  101 bits (252), Expect = 9e-20
 Identities = 52/161 (32%), Positives = 93/161 (57%)
 Frame = -1

Query: 484 SSQRILSLLQNHPCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAY 305
           S+   L++LQNH C T +H HQI  H+I TG   +P A+ +   A T  +  +  I+ AY
Sbjct: 26  SNHPCLTMLQNH-CTTINHFHQIYPHIIKTGLTLNPIASTR---ALTFCASPSGNINYAY 81

Query: 304 QLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLS 125
           +LF+R+P+   Y+WN++I+ F+ ++ P  A+S++  M+ +   P   T+  V +A   L 
Sbjct: 82  KLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLG 141

Query: 124 CLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
               G  +H + +KLG ++  F+ N + ++YA    +++AR
Sbjct: 142 HAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEAR 182


>ref|XP_006372460.1| hypothetical protein POPTR_0017s01850g [Populus trichocarpa]
           gi|550319085|gb|ERP50257.1| hypothetical protein
           POPTR_0017s01850g [Populus trichocarpa]
          Length = 446

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 44/85 (51%), Positives = 60/85 (70%)
 Frame = -1

Query: 256 MIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLSCLSVGWTIHAQAIKLG 77
           M++ F E N+  +A S+Y+ M+ + ++PNN+TFSFVIRA +D+  L +G   H Q +K G
Sbjct: 1   MMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLCFHGQVVKFG 60

Query: 76  WESYDFVQNGLGHLYAVSNFVADAR 2
           WESYDFVQNGL HLYA   F+  AR
Sbjct: 61  WESYDFVQNGLIHLYANCGFMDLAR 85


>gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 847

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 62/174 (35%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
 Frame = -1

Query: 502 PTKYLKSSQRILSLLQNHP-------CLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFT 344
           P   L SS     LLQNHP       C T   L Q+  H+I TG     FA  KL+  F 
Sbjct: 72  PLHLLPSSDPPYKLLQNHPSLSLLSKCRTIQTLKQVHCHIIKTGLHHTQFALSKLIE-FC 130

Query: 343 ATSDRASGISDAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNY 164
           A S     +  A  LF  +       WN+MI+GF+ ++ P   L  Y +M+ +G +PN+Y
Sbjct: 131 AVSPFGD-LPYALLLFESIDEPNQVIWNTMIRGFSLSSSPGLTLEFYVKMIWSGIVPNSY 189

Query: 163 TFSFVIRAAVDLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
           TF FV+++    +    G  IH Q +KLG ES  FV   L ++YA +    +AR
Sbjct: 190 TFPFVLKSCAKTASTQEGKQIHGQVLKLGLESDAFVHTSLINMYAQNGEFGNAR 243


>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
 Frame = -1

Query: 469 LSLLQNH--PCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAYQLF 296
           LS+L+ H   C      ++I S +I+TG +SD FAA +LL    +T     G+  + Q+F
Sbjct: 29  LSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKF--STDSPFIGLDYSLQIF 86

Query: 295 LRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLSCLS 116
            R+ +   + WN+M++ + ++N   KAL +Y+ MV+N   P+NYT+  V++A        
Sbjct: 87  DRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEF 146

Query: 115 VGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
            G  IH   +K+G++S  +VQN L ++YAV   + DAR
Sbjct: 147 GGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDAR 184



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/120 (27%), Positives = 60/120 (50%)
 Frame = -1

Query: 388 VSDPFAAGKLLAAFTATSDRASGISDAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALS 209
           V D  +   +LA +    D    + +A++LF  +  +   +W+++I G+ +     +AL 
Sbjct: 192 VLDSVSWNSILAGYVKKGDMGQ-VMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALV 250

Query: 208 IYEQMVRNGFMPNNYTFSFVIRAAVDLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYA 29
           ++ +M  NG   +      V+ A   LS +  G  IH   I++G ESY  +QN L H+Y+
Sbjct: 251 MFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYS 310


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
 Frame = -1

Query: 469 LSLLQNH--PCLTTSHLHQIQSHLIVTGTVSDPFAAGKLLAAFTATSDRASGISDAYQLF 296
           LS+L+ H   C      ++I S +I+TG +SD FAA +LL    +T     G+  + Q+F
Sbjct: 41  LSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKF--STDSPFIGLDYSLQIF 98

Query: 295 LRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRAAVDLSCLS 116
            R+ +   + WN+M++ + ++N   KAL +Y+ MV+N   P+NYT+  V++A        
Sbjct: 99  DRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEF 158

Query: 115 VGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
            G  IH   +K+G++S  +VQN L ++YAV   + DAR
Sbjct: 159 GGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDAR 196



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/106 (29%), Positives = 57/106 (53%)
 Frame = -1

Query: 319 ISDAYQLFLRLPHRTPYTWNSMIKGFAETNQPWKALSIYEQMVRNGFMPNNYTFSFVIRA 140
           + +A++LF  +  +   +W+++I G+ +     +AL ++ +M  NG   +      V+ A
Sbjct: 254 VMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSA 313

Query: 139 AVDLSCLSVGWTIHAQAIKLGWESYDFVQNGLGHLYAVSNFVADAR 2
              LS +  G  IH   I++G ESY  +QN L H+Y+ S  + DA+
Sbjct: 314 CAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQ 359