BLASTX nr result
ID: Rheum21_contig00039528
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039528
(380 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006478452.1| PREDICTED: pentatricopeptide repeat-containi... 133 3e-29
gb|EOY32644.1| Tetratricopeptide repeat-like superfamily protein... 132 4e-29
ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
emb|CBI17034.3| unnamed protein product [Vitis vinifera] 132 4e-29
ref|XP_006441713.1| hypothetical protein CICLE_v10024266mg [Citr... 132 5e-29
ref|XP_004292402.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28
gb|ESW29012.1| hypothetical protein PHAVU_002G036600g [Phaseolus... 129 4e-28
ref|XP_004511470.1| PREDICTED: pentatricopeptide repeat-containi... 129 4e-28
gb|EMJ01368.1| hypothetical protein PRUPE_ppa016573mg [Prunus pe... 129 4e-28
ref|XP_006390774.1| hypothetical protein EUTSA_v10018183mg [Eutr... 127 1e-27
ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Popu... 127 1e-27
ref|XP_002327307.1| predicted protein [Populus trichocarpa] 127 1e-27
ref|XP_003610897.1| Pentatricopeptide repeat-containing protein ... 126 3e-27
emb|CBI17032.3| unnamed protein product [Vitis vinifera] 125 8e-27
ref|NP_177298.1| pentatricopeptide repeat-containing protein [Ar... 121 1e-25
dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana] 121 1e-25
ref|XP_006347001.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
gb|EXB44215.1| hypothetical protein L484_002907 [Morus notabilis] 118 9e-25
ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containi... 115 6e-24
ref|XP_006301205.1| hypothetical protein CARUB_v10021604mg [Caps... 114 2e-23
>ref|XP_006478452.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Citrus sinensis]
Length = 744
Score = 133 bits (334), Expect = 3e-29
Identities = 63/89 (70%), Positives = 76/89 (85%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAEKL+R MPMEPD+V+W LLGSCRKH ETRLA++A+ KL++L+P +SLG+V MSNIY
Sbjct: 523 EAEKLIREMPMEPDSVIWSVLLGSCRKHGETRLAELAATKLKQLEPGDSLGFVQMSNIYC 582
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
GSFN+A L+RKEM GSRVRK PGLSWI
Sbjct: 583 LSGSFNKARLIRKEMKGSRVRKYPGLSWI 611
>gb|EOY32644.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 741
Score = 132 bits (333), Expect = 4e-29
Identities = 64/89 (71%), Positives = 75/89 (84%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAE+L+ MPMEPD+VVW +LLGSCRKH ETRLAKIA+ KL++++P NSLGYV MSNIY
Sbjct: 520 EAEELISRMPMEPDSVVWSALLGSCRKHGETRLAKIAAAKLKKMEPKNSLGYVQMSNIYS 579
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S GSFNEA +RKEM GS V+K PGLSWI
Sbjct: 580 SGGSFNEAGTIRKEMNGSGVKKEPGLSWI 608
>ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 132 bits (333), Expect = 4e-29
Identities = 62/89 (69%), Positives = 77/89 (86%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EA++L+ MPMEPD+VVW +LLGSCRKH ET+LAK+A+ KL+ELDP+NSLGYVLMSNI+
Sbjct: 520 EAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFC 579
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
++G FNEA L+R+EM G VRK PGLSWI
Sbjct: 580 TDGRFNEARLIRREMEGKIVRKEPGLSWI 608
>emb|CBI17034.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 132 bits (333), Expect = 4e-29
Identities = 62/89 (69%), Positives = 77/89 (86%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EA++L+ MPMEPD+VVW +LLGSCRKH ET+LAK+A+ KL+ELDP+NSLGYVLMSNI+
Sbjct: 364 EAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFC 423
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
++G FNEA L+R+EM G VRK PGLSWI
Sbjct: 424 TDGRFNEARLIRREMEGKIVRKEPGLSWI 452
>ref|XP_006441713.1| hypothetical protein CICLE_v10024266mg [Citrus clementina]
gi|557543975|gb|ESR54953.1| hypothetical protein
CICLE_v10024266mg [Citrus clementina]
Length = 717
Score = 132 bits (332), Expect = 5e-29
Identities = 63/89 (70%), Positives = 76/89 (85%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAEKLVR MPMEPD+V+W +LLGSCRKH ETRLA++A+ KL++L+P +SLG+V MSNIY
Sbjct: 523 EAEKLVREMPMEPDSVIWSALLGSCRKHGETRLAELAATKLKQLEPVDSLGFVQMSNIYC 582
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
GSFN+A L+ KEM GSRVRK PGLSWI
Sbjct: 583 LSGSFNKARLIMKEMKGSRVRKEPGLSWI 611
>ref|XP_004292402.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Fragaria vesca subsp. vesca]
Length = 792
Score = 130 bits (328), Expect = 1e-28
Identities = 63/89 (70%), Positives = 75/89 (84%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAEKLV MPMEPD+VVW +LLGSCRKH T+LAK+A+D+L+EL P+ SL YV MSNIY
Sbjct: 571 EAEKLVSRMPMEPDSVVWSALLGSCRKHGHTQLAKLAADRLKELAPEGSLVYVQMSNIYS 630
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S+G+F EA L+RKEM GSRV+K PGLSWI
Sbjct: 631 SDGNFGEAGLIRKEMKGSRVKKEPGLSWI 659
>gb|ESW29012.1| hypothetical protein PHAVU_002G036600g [Phaseolus vulgaris]
Length = 767
Score = 129 bits (324), Expect = 4e-28
Identities = 60/89 (67%), Positives = 75/89 (84%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAE+L+R MPM+PD+V+W SLLGSCRKH ET LAK+A+DK +EL+P+NSLGYV MSN+Y
Sbjct: 546 EAEELIRKMPMKPDSVIWSSLLGSCRKHGETLLAKLAADKFKELEPNNSLGYVQMSNVYS 605
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S GSF EA L+RKEM+ +VRK PGLS +
Sbjct: 606 SAGSFTEACLIRKEMSNYKVRKEPGLSLV 634
>ref|XP_004511470.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cicer arietinum]
Length = 767
Score = 129 bits (324), Expect = 4e-28
Identities = 61/89 (68%), Positives = 73/89 (82%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAE+L+R MPM+PD+V+W SLLGSCRKH E LAK+A+DK +EL+P NSL Y+ MSNIY
Sbjct: 546 EAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKELEPKNSLAYIQMSNIYS 605
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S GSF EA LMRKEM S+VRK PGLSW+
Sbjct: 606 SGGSFIEAGLMRKEMRDSKVRKRPGLSWV 634
>gb|EMJ01368.1| hypothetical protein PRUPE_ppa016573mg [Prunus persica]
Length = 755
Score = 129 bits (324), Expect = 4e-28
Identities = 60/89 (67%), Positives = 78/89 (87%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAE+LV MPM+PD+VVW +LLGSCRKH +T+LAK+A+++L+EL P++SLGYV MSN+Y
Sbjct: 534 EAEELVSRMPMDPDSVVWSALLGSCRKHGKTQLAKLAANRLKELAPEDSLGYVQMSNMYC 593
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S+G+F EA L+RKEM GSRV+K PGLSWI
Sbjct: 594 SDGNFGEAGLVRKEMKGSRVKKEPGLSWI 622
>ref|XP_006390774.1| hypothetical protein EUTSA_v10018183mg [Eutrema salsugineum]
gi|557087208|gb|ESQ28060.1| hypothetical protein
EUTSA_v10018183mg [Eutrema salsugineum]
Length = 747
Score = 127 bits (320), Expect = 1e-27
Identities = 60/88 (68%), Positives = 72/88 (81%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAE++++ MPM+PDAVVW +LLGSCRKH TRL K+A+DKL+EL+P NSL Y+ MSNIY
Sbjct: 520 EAEEVIKQMPMDPDAVVWSALLGSCRKHGNTRLGKLAADKLKELEPTNSLSYIQMSNIYS 579
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSW 112
+EGSFNEA RKEM RVRK PGLSW
Sbjct: 580 AEGSFNEADKSRKEMETWRVRKEPGLSW 607
>ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Populus trichocarpa]
gi|550325453|gb|ERP53980.1| hypothetical protein
POPTR_0013s10600g [Populus trichocarpa]
Length = 636
Score = 127 bits (320), Expect = 1e-27
Identities = 61/89 (68%), Positives = 75/89 (84%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EA +L+ MPM+PD+VVW +LL SCRK+ ET+LAK+A+DKL+EL+P NSLGYV +SNIY
Sbjct: 415 EAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKLAADKLKELEPGNSLGYVQISNIYC 474
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S GS+NEA L+R EM GSRVRK PGLSWI
Sbjct: 475 SGGSYNEAGLIRDEMNGSRVRKEPGLSWI 503
>ref|XP_002327307.1| predicted protein [Populus trichocarpa]
Length = 527
Score = 127 bits (320), Expect = 1e-27
Identities = 61/89 (68%), Positives = 75/89 (84%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EA +L+ MPM+PD+VVW +LL SCRK+ ET+LAK+A+DKL+EL+P NSLGYV +SNIY
Sbjct: 306 EAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKLAADKLKELEPGNSLGYVQISNIYC 365
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S GS+NEA L+R EM GSRVRK PGLSWI
Sbjct: 366 SGGSYNEAGLIRDEMNGSRVRKEPGLSWI 394
>ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 774
Score = 126 bits (317), Expect = 3e-27
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAE+L+R MPM+PD+V+W SLLGSCRKH E LAK+A+DK + LDP NSL Y+ MSNIY
Sbjct: 553 EAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYS 612
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S GSF EA L+RKEM S+VRK PGLSW+
Sbjct: 613 SGGSFIEAGLIRKEMRDSKVRKRPGLSWV 641
>emb|CBI17032.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 125 bits (313), Expect = 8e-27
Identities = 57/89 (64%), Positives = 73/89 (82%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EA++L+ MPMEPD++VW +LLG CRKH ET+ AK+A+ KL+ELDP+NSLGY+LMSNI+
Sbjct: 510 EAKELIDKMPMEPDSMVWSALLGGCRKHGETKFAKLAAVKLKELDPNNSLGYILMSNIFS 569
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
+ G FNEA L+R+EM VRK PGLSWI
Sbjct: 570 TNGHFNEARLIRREMERKTVRKEPGLSWI 598
>ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g71420 gi|12323734|gb|AAG51830.1|AC016163_19
hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 121 bits (303), Expect = 1e-25
Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLREL-DPDNSLGYVLMSNIY 199
EAE++++ MPM+PDAVVWI+LLGSCRKH TRL K+A+DKL+EL +P NS+ Y+ MSNIY
Sbjct: 521 EAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIY 580
Query: 198 FSEGSFNEALLMRKEMTGSRVRKNPGLSW 112
+EGSFNEA L KEM RVRK P LSW
Sbjct: 581 NAEGSFNEANLSIKEMETWRVRKEPDLSW 609
>dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
Length = 727
Score = 121 bits (303), Expect = 1e-25
Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLREL-DPDNSLGYVLMSNIY 199
EAE++++ MPM+PDAVVWI+LLGSCRKH TRL K+A+DKL+EL +P NS+ Y+ MSNIY
Sbjct: 521 EAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIY 580
Query: 198 FSEGSFNEALLMRKEMTGSRVRKNPGLSW 112
+EGSFNEA L KEM RVRK P LSW
Sbjct: 581 NAEGSFNEANLSIKEMETWRVRKEPDLSW 609
>ref|XP_006347001.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Solanum tuberosum]
Length = 607
Score = 119 bits (299), Expect = 3e-25
Identities = 55/88 (62%), Positives = 71/88 (80%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
+AEK+++ MPM+PD VVW + LG+CRKH E+ LA+IA+ +L+ELDP+NSLGYVLMSN+Y
Sbjct: 516 QAEKIIKEMPMQPDYVVWSAFLGACRKHRESGLAQIAASQLKELDPENSLGYVLMSNVYC 575
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSW 112
S SFNEA +RK+M G V K PGLSW
Sbjct: 576 SNHSFNEAGHLRKQMRGLGVTKQPGLSW 603
>gb|EXB44215.1| hypothetical protein L484_002907 [Morus notabilis]
Length = 741
Score = 118 bits (295), Expect = 9e-25
Identities = 59/89 (66%), Positives = 68/89 (76%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAEKL+ MPMEPD+VVW +LLGSC+KH ET LAK+ASDKL+EL+P +SLGYV MSNIY+
Sbjct: 531 EAEKLIGQMPMEPDSVVWSALLGSCKKHGETGLAKLASDKLKELEPRSSLGYVQMSNIYY 590
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSWI 109
S G FNEA VRK PGLSWI
Sbjct: 591 SSGKFNEA-----------VRKEPGLSWI 608
>ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
gi|449503335|ref|XP_004161951.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
Length = 629
Score = 115 bits (288), Expect = 6e-24
Identities = 58/88 (65%), Positives = 66/88 (75%)
Frame = -3
Query: 378 QEAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIY 199
QEA + MP+EPD VVW S LGSCRK+ T LAK+AS KL+ELDP NSL YV MSN+Y
Sbjct: 407 QEAHDFISNMPIEPDFVVWSSFLGSCRKYGATGLAKLASYKLKELDPSNSLAYVQMSNLY 466
Query: 198 FSEGSFNEALLMRKEMTGSRVRKNPGLS 115
GSF EA L+R EMTGSRV+K PGLS
Sbjct: 467 CFNGSFYEADLIRMEMTGSRVKKEPGLS 494
>ref|XP_006301205.1| hypothetical protein CARUB_v10021604mg [Capsella rubella]
gi|482569915|gb|EOA34103.1| hypothetical protein
CARUB_v10021604mg [Capsella rubella]
Length = 744
Score = 114 bits (284), Expect = 2e-23
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = -3
Query: 375 EAEKLVRTMPMEPDAVVWISLLGSCRKHNETRLAKIASDKLRELDPDNSLGYVLMSNIYF 196
EAE++++ MPM+PD VVW +LLGSCRKH TRL K+A+DKL+EL+P NSL Y+ MSNIY
Sbjct: 521 EAEEVIKQMPMDPDPVVWSALLGSCRKHGNTRLGKLAADKLKELEPVNSLSYIQMSNIYN 580
Query: 195 SEGSFNEALLMRKEMTGSRVRKNPGLSW 112
+E SFN+A KEM RVRK GLSW
Sbjct: 581 AEFSFNKANKSIKEMETWRVRKETGLSW 608