BLASTX nr result
ID: Rheum21_contig00039522
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039522
(261 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300334.1| DAMAGED DNA BINDING protein 1 B [Populus tri... 130 2e-28
gb|ESW31610.1| hypothetical protein PHAVU_002G252300g [Phaseolus... 130 2e-28
ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like... 130 2e-28
ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1-like... 130 2e-28
gb|EXC25620.1| DNA damage-binding protein 1a [Morus notabilis] 129 3e-28
ref|XP_003630019.1| DNA damage-binding protein [Medicago truncat... 129 3e-28
ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus c... 127 1e-27
gb|EOX96952.1| Damaged DNA binding protein 1A isoform 3 [Theobro... 127 2e-27
gb|EOX96951.1| Damaged DNA binding protein 1A isoform 2 [Theobro... 127 2e-27
gb|EOX96950.1| Damaged DNA binding protein 1A isoform 1 [Theobro... 127 2e-27
ref|XP_004504152.1| PREDICTED: DNA damage-binding protein 1-like... 127 2e-27
emb|CBI30975.3| unnamed protein product [Vitis vinifera] 126 3e-27
ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isof... 126 3e-27
ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isof... 126 3e-27
gb|EPS69820.1| hypothetical protein M569_04940 [Genlisea aurea] 126 3e-27
gb|EMJ14913.1| hypothetical protein PRUPE_ppa000579mg [Prunus pe... 126 3e-27
ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thal... 126 3e-27
ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis t... 126 3e-27
dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Ar... 126 3e-27
ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thal... 125 5e-27
>ref|XP_002300334.1| DAMAGED DNA BINDING protein 1 B [Populus trichocarpa]
gi|222847592|gb|EEE85139.1| DAMAGED DNA BINDING protein
1 B [Populus trichocarpa]
Length = 1088
Score = 130 bits (327), Expect = 2e-28
Identities = 63/86 (73%), Positives = 75/86 (87%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+EPLGGE + R+VLLCSFEG++YLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCSFEGIAYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LLN S G L DR+KVS+GT+P TLRT
Sbjct: 609 LLNLSTGGLKDRKKVSLGTQPITLRT 634
>gb|ESW31610.1| hypothetical protein PHAVU_002G252300g [Phaseolus vulgaris]
Length = 1089
Score = 130 bits (326), Expect = 2e-28
Identities = 62/86 (72%), Positives = 76/86 (88%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFSLPDLNLVTKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
+LNTS G L+DR+KVS+GT+P TLRT
Sbjct: 609 MLNTSTGELTDRKKVSLGTQPITLRT 634
>ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine
max]
Length = 1089
Score = 130 bits (326), Expect = 2e-28
Identities = 62/86 (72%), Positives = 76/86 (88%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
+LNTS G L+DR+KVS+GT+P TLRT
Sbjct: 609 MLNTSTGELTDRKKVSLGTQPITLRT 634
>ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine
max]
Length = 1089
Score = 130 bits (326), Expect = 2e-28
Identities = 62/86 (72%), Positives = 76/86 (88%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
+LNTS G L+DR+KVS+GT+P TLRT
Sbjct: 609 MLNTSTGELADRKKVSLGTQPITLRT 634
>gb|EXC25620.1| DNA damage-binding protein 1a [Morus notabilis]
Length = 976
Score = 129 bits (325), Expect = 3e-28
Identities = 60/86 (69%), Positives = 76/86 (88%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LA VGMWT +SV +FSLP+L L T+EPLGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 446 LAVVGMWTDISVRLFSLPDLNLITKEPLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 505
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LLNT+ G L+DR+K+S+GT+P TLRT
Sbjct: 506 LLNTTTGELTDRKKISLGTQPITLRT 531
>ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
gi|355524041|gb|AET04495.1| DNA damage-binding protein
[Medicago truncatula]
Length = 1171
Score = 129 bits (325), Expect = 3e-28
Identities = 62/86 (72%), Positives = 76/86 (88%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV +FSLPEL L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 631 LAAVGMWTDISVRLFSLPELNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 690
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
+LNTS G L+DR+KVS+GT+P TLRT
Sbjct: 691 MLNTSTGELTDRKKVSLGTQPITLRT 716
>ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
gi|223534048|gb|EEF35767.1| DNA repair protein xp-E,
putative [Ricinus communis]
Length = 1033
Score = 127 bits (320), Expect = 1e-27
Identities = 62/86 (72%), Positives = 75/86 (87%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLCSFEG+SYLLC+LGDGHLL+F
Sbjct: 494 LAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCSFEGISYLLCALGDGHLLNF 553
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LLN + G L+DR+KVS+GT+P TLRT
Sbjct: 554 LLNLNTGELTDRKKVSLGTQPITLRT 579
>gb|EOX96952.1| Damaged DNA binding protein 1A isoform 3 [Theobroma cacao]
Length = 985
Score = 127 bits (319), Expect = 2e-27
Identities = 62/86 (72%), Positives = 75/86 (87%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLCSFEG+SYLLC+LGDGHLL+F
Sbjct: 446 LAAVGMWTDISVRIFSLPDLNLITKEQLGGEIIPRSVLLCSFEGISYLLCALGDGHLLNF 505
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LN S+G L+DR+KVS+GT+P TLRT
Sbjct: 506 QLNMSSGELTDRKKVSLGTQPITLRT 531
>gb|EOX96951.1| Damaged DNA binding protein 1A isoform 2 [Theobroma cacao]
Length = 1040
Score = 127 bits (319), Expect = 2e-27
Identities = 62/86 (72%), Positives = 75/86 (87%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLCSFEG+SYLLC+LGDGHLL+F
Sbjct: 501 LAAVGMWTDISVRIFSLPDLNLITKEQLGGEIIPRSVLLCSFEGISYLLCALGDGHLLNF 560
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LN S+G L+DR+KVS+GT+P TLRT
Sbjct: 561 QLNMSSGELTDRKKVSLGTQPITLRT 586
>gb|EOX96950.1| Damaged DNA binding protein 1A isoform 1 [Theobroma cacao]
Length = 1088
Score = 127 bits (319), Expect = 2e-27
Identities = 62/86 (72%), Positives = 75/86 (87%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLCSFEG+SYLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFSLPDLNLITKEQLGGEIIPRSVLLCSFEGISYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LN S+G L+DR+KVS+GT+P TLRT
Sbjct: 609 QLNMSSGELTDRKKVSLGTQPITLRT 634
>ref|XP_004504152.1| PREDICTED: DNA damage-binding protein 1-like [Cicer arietinum]
Length = 1088
Score = 127 bits (318), Expect = 2e-27
Identities = 61/86 (70%), Positives = 75/86 (87%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV +FSLP+L L T+E LGGE + R+VLLC FEG+SYLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRLFSLPDLNLITKEHLGGEIIPRSVLLCEFEGISYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
+LNTS G L+DR+KVS+GT+P TLRT
Sbjct: 609 VLNTSNGELTDRKKVSLGTQPITLRT 634
>emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 126 bits (317), Expect = 3e-27
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLCSFEG+ YLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LLN S G L+DR+KVS+GT+P TLRT
Sbjct: 609 LLNMSTGELTDRKKVSLGTQPITLRT 634
>ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 126 bits (317), Expect = 3e-27
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLCSFEG+ YLLC+LGDGHLL+F
Sbjct: 528 LAAVGMWTDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNF 587
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LLN S G L+DR+KVS+GT+P TLRT
Sbjct: 588 LLNMSTGELTDRKKVSLGTQPITLRT 613
>ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 126 bits (317), Expect = 3e-27
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLP+L L T+E LGGE + R+VLLCSFEG+ YLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
LLN S G L+DR+KVS+GT+P TLRT
Sbjct: 609 LLNMSTGELTDRKKVSLGTQPITLRT 634
>gb|EPS69820.1| hypothetical protein M569_04940 [Genlisea aurea]
Length = 1091
Score = 126 bits (316), Expect = 3e-27
Identities = 60/86 (69%), Positives = 75/86 (87%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMW +SV I+SLP+L + T+EPLGGE + R+VLLCSFEG+SYLLC+LGDGHLL+F
Sbjct: 551 LAAVGMWKDISVRIYSLPDLNVITKEPLGGEIIPRSVLLCSFEGISYLLCALGDGHLLNF 610
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
+LNTS+G L DR+KVS+GT+P LRT
Sbjct: 611 VLNTSSGELVDRKKVSLGTQPIALRT 636
>gb|EMJ14913.1| hypothetical protein PRUPE_ppa000579mg [Prunus persica]
Length = 1089
Score = 126 bits (316), Expect = 3e-27
Identities = 60/86 (69%), Positives = 75/86 (87%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV I+SLP+L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVQIYSLPDLSRITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
+LNTS G L+DR+KVS+GT+P TLRT
Sbjct: 609 ILNTSTGELTDRKKVSLGTQPITLRT 634
>ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA
damage-binding protein 1a; AltName: Full=UV-damaged
DNA-binding protein 1a; Short=DDB1a
gi|7267302|emb|CAB81084.1| UV-damaged DNA binding
factor-like protein [Arabidopsis thaliana]
gi|25054828|gb|AAN71904.1| putative UV-damaged DNA
binding factor [Arabidopsis thaliana]
gi|332657117|gb|AEE82517.1| DNA damage-binding protein
1a [Arabidopsis thaliana]
Length = 1088
Score = 126 bits (316), Expect = 3e-27
Identities = 60/86 (69%), Positives = 74/86 (86%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLPEL L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
++T+ G L DR+KVS+GT+P TLRT
Sbjct: 609 QMDTTTGQLKDRKKVSLGTQPITLRT 634
>ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|332657118|gb|AEE82518.1| DNA damage-binding protein
1a [Arabidopsis thaliana]
Length = 1067
Score = 126 bits (316), Expect = 3e-27
Identities = 60/86 (69%), Positives = 74/86 (86%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLPEL L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 528 LAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 587
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
++T+ G L DR+KVS+GT+P TLRT
Sbjct: 588 QMDTTTGQLKDRKKVSLGTQPITLRT 613
>dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
Length = 727
Score = 126 bits (316), Expect = 3e-27
Identities = 60/86 (69%), Positives = 74/86 (86%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IFSLPEL L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 188 LAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 247
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
++T+ G L DR+KVS+GT+P TLRT
Sbjct: 248 QMDTTTGQLKDRKKVSLGTQPITLRT 273
>ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA
damage-binding protein 1b; AltName: Full=UV-damaged
DNA-binding protein 1b; Short=DDB1b
gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding
protein- like [Arabidopsis thaliana]
gi|332659001|gb|AEE84401.1| DNA damage-binding protein
1b [Arabidopsis thaliana]
Length = 1088
Score = 125 bits (315), Expect = 5e-27
Identities = 61/86 (70%), Positives = 73/86 (84%)
Frame = +1
Query: 1 LAAVGMWTKLSVIIFSLPELVLKTEEPLGGEFLSRAVLLCSFEGMSYLLCSLGDGHLLSF 180
LAAVGMWT +SV IF LP+L L T+E LGGE + R+VLLC+FEG+SYLLC+LGDGHLL+F
Sbjct: 549 LAAVGMWTDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF 608
Query: 181 LLNTSAGTLSDREKVSVGTRPFTLRT 258
L+TS G L DR+KVS+GTRP TLRT
Sbjct: 609 QLDTSCGKLRDRKKVSLGTRPITLRT 634