BLASTX nr result
ID: Rheum21_contig00039386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00039386
(309 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302779.2| hypothetical protein POPTR_0002s19490g [Popu... 63 4e-08
ref|XP_002302780.1| predicted protein [Populus trichocarpa] 63 4e-08
ref|XP_003633267.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease... 63 5e-08
emb|CBI21872.3| unnamed protein product [Vitis vinifera] 63 5e-08
emb|CAN79216.1| hypothetical protein VITISV_012793 [Vitis vinifera] 63 5e-08
gb|EOX95295.1| Ribonucleases P/MRP protein subunit POP1, putativ... 62 6e-08
gb|EMJ22754.1| hypothetical protein PRUPE_ppa001407mg [Prunus pe... 62 6e-08
emb|CBI33390.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002320285.2| hypothetical protein POPTR_0014s11400g [Popu... 61 2e-07
ref|XP_002515263.1| hypothetical protein RCOM_1346560 [Ricinus c... 61 2e-07
ref|XP_003545725.1| PREDICTED: uncharacterized protein LOC100788... 60 3e-07
ref|XP_006444525.1| hypothetical protein CICLE_v10023744mg [Citr... 59 7e-07
gb|ESW05500.1| hypothetical protein PHAVU_011G184700g [Phaseolus... 59 9e-07
ref|XP_004289541.1| PREDICTED: ribonucleases P/MRP protein subun... 59 9e-07
ref|XP_006360505.1| PREDICTED: uncharacterized protein LOC102587... 57 3e-06
ref|XP_004250492.1| PREDICTED: uncharacterized protein LOC101252... 57 3e-06
gb|EXC07677.1| Ribonucleases P/MRP protein subunit POP1 [Morus n... 55 1e-05
>ref|XP_002302779.2| hypothetical protein POPTR_0002s19490g [Populus trichocarpa]
gi|550345390|gb|EEE82052.2| hypothetical protein
POPTR_0002s19490g [Populus trichocarpa]
Length = 767
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/62 (50%), Positives = 46/62 (74%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG+K+ +++ AP PR +N+QKFA +RA+ELES+H+IVS+RLN +F RTT
Sbjct: 1 MAVDGSKKSKVSTAP-PRKINVQKFAETRASELESLHTIVSNRLNNNFRSQRNKRRRTTA 59
Query: 59 FD 54
++
Sbjct: 60 YE 61
>ref|XP_002302780.1| predicted protein [Populus trichocarpa]
Length = 169
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/62 (50%), Positives = 46/62 (74%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG+K+ +++ AP PR +N+QKFA +RA+ELES+H+IVS+RLN +F RTT
Sbjct: 1 MAVDGSKKSKVSTAP-PRKINVQKFAETRASELESLHTIVSNRLNNNFRSQRNKRRRTTA 59
Query: 59 FD 54
++
Sbjct: 60 YE 61
>ref|XP_003633267.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleases P/MRP protein subunit
POP1-like [Vitis vinifera]
Length = 745
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG K+ I AP PR+LN++KFA SRA+ELE++HSIV++RLN +F RTTG
Sbjct: 1 MATDGFKRSSI--APPPRSLNVEKFAESRASELEALHSIVANRLNNNFRSQRNKRRRTTG 58
Query: 59 FD 54
D
Sbjct: 59 HD 60
>emb|CBI21872.3| unnamed protein product [Vitis vinifera]
Length = 806
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG K+ I AP PR+LN++KFA SRA+ELE++HSIV++RLN +F RTTG
Sbjct: 1 MATDGFKRSSI--APPPRSLNVEKFAESRASELEALHSIVANRLNNNFRSQRNKRRRTTG 58
Query: 59 FD 54
D
Sbjct: 59 HD 60
>emb|CAN79216.1| hypothetical protein VITISV_012793 [Vitis vinifera]
Length = 743
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG K+ I AP PR+LN++KFA SRA+ELE++HSIV++RLN +F RTTG
Sbjct: 1 MATDGFKRSSI--APPPRSLNVEKFAESRASELEALHSIVANRLNNNFRSQRNKRRRTTG 58
Query: 59 FD 54
D
Sbjct: 59 HD 60
>gb|EOX95295.1| Ribonucleases P/MRP protein subunit POP1, putative [Theobroma
cacao]
Length = 860
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG+K +++ + PR +N++KFA +RA ELES+HS +S+RLN DF RTT
Sbjct: 1 MAIDGSKTSQVSASQPPRKINVKKFAEARATELESLHSTISTRLNDDFRSRRNKRRRTTA 60
Query: 59 FD 54
FD
Sbjct: 61 FD 62
>gb|EMJ22754.1| hypothetical protein PRUPE_ppa001407mg [Prunus persica]
Length = 836
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG ++ +++ AP PR +N+QKFA SRA ELE++H+IVS+R+N DF RTT
Sbjct: 1 MATDGFRRLQVSSAP-PRKINVQKFAESRAPELETLHTIVSNRVNNDFRSRRSKRRRTTA 59
Query: 59 FD 54
+D
Sbjct: 60 YD 61
>emb|CBI33390.3| unnamed protein product [Vitis vinifera]
Length = 2140
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG K+ I AP P +LN++KFA SRAAELE++HSIV++RLN +F RTTG
Sbjct: 1 MATDGFKRSSI--APPPGSLNVEKFAESRAAELEALHSIVANRLNNNFRSQRNKRRRTTG 58
Query: 59 FD 54
D
Sbjct: 59 HD 60
>ref|XP_002320285.2| hypothetical protein POPTR_0014s11400g [Populus trichocarpa]
gi|550323988|gb|EEE98600.2| hypothetical protein
POPTR_0014s11400g [Populus trichocarpa]
Length = 66
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG+K+ +++ AP PR +N+QKFA +RA ELES+HSIVS+R N +F TT
Sbjct: 1 MAGDGSKKSQVSTAP-PRKMNVQKFAENRAPELESLHSIVSNRTNNNFRSLRNKRRITTA 59
Query: 59 FD 54
++
Sbjct: 60 YN 61
>ref|XP_002515263.1| hypothetical protein RCOM_1346560 [Ricinus communis]
gi|223545743|gb|EEF47247.1| hypothetical protein
RCOM_1346560 [Ricinus communis]
Length = 838
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
M DG+K+ +++ P PR +N+QKFA SRA+ELE+++SIVSSRLN DF RT+
Sbjct: 1 MTGDGSKRSQVSANP-PRKINVQKFAESRASELETLYSIVSSRLNNDFRSRRSKRRRTSA 59
Query: 59 FD 54
+D
Sbjct: 60 YD 61
>ref|XP_003545725.1| PREDICTED: uncharacterized protein LOC100788705 [Glycine max]
Length = 886
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -2
Query: 239 MAADGTKQWRI---TPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXR 69
M DGTK+ ++ TP P PR +N+QK+A SRA EL+S+ SI+ +R+N D+ R
Sbjct: 1 MVTDGTKKPQVSVPTPPPPPRKINVQKYAESRALELQSLQSIIENRVNSDYRSQRNKRRR 60
Query: 68 TTGFD 54
TT FD
Sbjct: 61 TTAFD 65
>ref|XP_006444525.1| hypothetical protein CICLE_v10023744mg [Citrus clementina]
gi|557546787|gb|ESR57765.1| hypothetical protein
CICLE_v10023744mg [Citrus clementina]
Length = 856
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/62 (46%), Positives = 46/62 (74%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA+DG+K+ +++ P PR LN+QKFA +RA+E+ES+HSIVS+RL+ +F RT+
Sbjct: 1 MASDGSKRSQVSSVP-PRKLNVQKFAEARASEMESLHSIVSNRLDNNFRSRRNKRRRTSA 59
Query: 59 FD 54
++
Sbjct: 60 YN 61
>gb|ESW05500.1| hypothetical protein PHAVU_011G184700g [Phaseolus vulgaris]
Length = 881
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
M A+GTK+ +I P P RT+N+ K+A SRA ELES+ SI+ +R+N D+ RTT
Sbjct: 1 MVAEGTKRPQILPPP--RTINVHKYAESRAVELESLQSIIKNRVNNDYTARRNKRRRTTA 58
Query: 59 FD 54
FD
Sbjct: 59 FD 60
>ref|XP_004289541.1| PREDICTED: ribonucleases P/MRP protein subunit POP1-like [Fragaria
vesca subsp. vesca]
Length = 852
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = -2
Query: 239 MAADGTKQWRITPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTG 60
MA DG K+ +++ AP PR L++QKFA +RA ELE++H+IV+ RL DF RTT
Sbjct: 1 MATDGHKRSQVSSAP-PRKLSVQKFAEARATELETLHTIVTDRLKNDFRSQRSKRRRTTA 59
Query: 59 FD 54
+D
Sbjct: 60 YD 61
>ref|XP_006360505.1| PREDICTED: uncharacterized protein LOC102587217 [Solanum tuberosum]
Length = 842
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = -2
Query: 206 TPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTGFD 54
T A PRTLN+ KFA SRA+ELES+HSIV RL+ DF RTTG D
Sbjct: 10 TVAGPPRTLNVNKFAESRASELESLHSIVKERLSNDFRSKRSKRRRTTGHD 60
>ref|XP_004250492.1| PREDICTED: uncharacterized protein LOC101252549 [Solanum
lycopersicum]
Length = 842
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = -2
Query: 206 TPAPHPRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTGFD 54
T A PRTLN+ KFA SRA+ELES+HSIV RL+ DF RTTG D
Sbjct: 10 TVAGPPRTLNVNKFAESRASELESLHSIVKERLSNDFRCKRSKRRRTTGHD 60
>gb|EXC07677.1| Ribonucleases P/MRP protein subunit POP1 [Morus notabilis]
Length = 854
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2
Query: 191 PRTLNIQKFASSRAAELESIHSIVSSRLNGDFXXXXXXXXRTTGFD 54
P +N+QKF+ SRAAELES+HSIV+ RL+GDF RTT FD
Sbjct: 19 PPKINVQKFSESRAAELESLHSIVADRLHGDFRSNRGKRRRTTAFD 64